RNA–Protein interactions for RNA: ENST00000449191.1

UBE2F-SCLY-201, Transcript of UBE2F-SCLY readthrough (NMD candidate), humanhuman

APPRIS P5 TSL 3 BASIC

Gene UBE2F-SCLY, Length 951 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-SCLY-201ENST00000449191 IGF1RP08069 1367 aa17.38■□□□□ 0.37
UBE2F-SCLY-201ENST00000449191 JPH4Q96JJ6 628 aa17.35■□□□□ 0.37
UBE2F-SCLY-201ENST00000449191 KIAA0586Q9BVV6 1533 aa17.32■□□□□ 0.36
UBE2F-SCLY-201ENST00000449191 CARMIL1Q5VZK9 1371 aa17.28■□□□□ 0.36
UBE2F-SCLY-201ENST00000449191 ADCY10Q96PN6 1610 aa17.21■□□□□ 0.35
UBE2F-SCLY-201ENST00000449191 KIF13AQ9H1H9 1805 aa17.21■□□□□ 0.35
UBE2F-SCLY-201ENST00000449191 IQGAP2Q13576 1575 aa17.19■□□□□ 0.34
UBE2F-SCLY-201ENST00000449191 MAPKBP1O60336 1514 aa17.18■□□□□ 0.34
UBE2F-SCLY-201ENST00000449191 RAPGEF2Q9Y4G8 1499 aa17.16■□□□□ 0.34
UBE2F-SCLY-201ENST00000449191 CARMIL2Q6F5E8 1435 aa17.14■□□□□ 0.33
UBE2F-SCLY-201ENST00000449191 NPM1P06748 294 aaKnown RBP eCLIP17.13■□□□□ 0.33
UBE2F-SCLY-201ENST00000449191 ABCC10Q5T3U5 1492 aa17.12■□□□□ 0.33
UBE2F-SCLY-201ENST00000449191 PTPRGP23470 1445 aa17.12■□□□□ 0.33
UBE2F-SCLY-201ENST00000449191 DIP2BQ9P265 1576 aa17.11■□□□□ 0.33
UBE2F-SCLY-201ENST00000449191 TNIKQ9UKE5 1360 aa17.11■□□□□ 0.33
UBE2F-SCLY-201ENST00000449191 UGGT2Q9NYU1 1516 aa17.09■□□□□ 0.33
UBE2F-SCLY-201ENST00000449191 DISP1Q96F81 1524 aa17.08■□□□□ 0.32
UBE2F-SCLY-201ENST00000449191 CTTNBP2Q8WZ74 1663 aa17.07■□□□□ 0.32
UBE2F-SCLY-201ENST00000449191 FAM69CQ0P6D2 419 aa17.06■□□□□ 0.32
UBE2F-SCLY-201ENST00000449191 KIAA0556O60303 1618 aa17.05■□□□□ 0.32
UBE2F-SCLY-201ENST00000449191 ABCC2Q92887 1545 aa17.05■□□□□ 0.32
UBE2F-SCLY-201ENST00000449191 TTBK1Q5TCY1 1321 aaPredicted RBP17.04■□□□□ 0.32
UBE2F-SCLY-201ENST00000449191 UHRF1BP1LA0JNW5 1464 aa17.04■□□□□ 0.32
UBE2F-SCLY-201ENST00000449191 PRXQ9BXM0 1461 aa17.01■□□□□ 0.31
UBE2F-SCLY-201ENST00000449191 UACAQ9BZF9 1416 aa17.01■□□□□ 0.31
UBE2F-SCLY-201ENST00000449191 TSPOAP1O95153 1857 aa16.97■□□□□ 0.31
UBE2F-SCLY-201ENST00000449191 ASXL2Q76L83 1435 aa16.96■□□□□ 0.31
UBE2F-SCLY-201ENST00000449191 PLB1Q6P1J6 1458 aa16.96■□□□□ 0.31
UBE2F-SCLY-201ENST00000449191 KDM5BQ9UGL1 1544 aa16.96■□□□□ 0.3
UBE2F-SCLY-201ENST00000449191 GOLGA3Q08378 1498 aa16.95■□□□□ 0.3
UBE2F-SCLY-201ENST00000449191 GLI2P10070 1586 aa16.94■□□□□ 0.3
UBE2F-SCLY-201ENST00000449191 KDM6BO15054 1643 aa16.94■□□□□ 0.3
UBE2F-SCLY-201ENST00000449191 ZCCHC11Q5TAX3 1644 aaKnown RBP16.94■□□□□ 0.3
UBE2F-SCLY-201ENST00000449191 AEBP2Q6ZN18 517 aaPredicted RBP16.9■□□□□ 0.3
UBE2F-SCLY-201ENST00000449191 PPRC1Q5VV67 1664 aaKnown RBP16.9■□□□□ 0.3
UBE2F-SCLY-201ENST00000449191 ABCA8O94911 1581 aa16.88■□□□□ 0.29
UBE2F-SCLY-201ENST00000449191 EPRSP07814 1512 aaKnown RBP16.87■□□□□ 0.29
UBE2F-SCLY-201ENST00000449191 MAP3K4Q9Y6R4 1608 aa16.86■□□□□ 0.29
UBE2F-SCLY-201ENST00000449191 EEA1Q15075 1411 aa16.86■□□□□ 0.29
UBE2F-SCLY-201ENST00000449191 CSRNP3Q8WYN3 585 aa16.84■□□□□ 0.29
UBE2F-SCLY-201ENST00000449191 WDR7Q9Y4E6 1490 aa16.84■□□□□ 0.29
UBE2F-SCLY-201ENST00000449191 SAMD9Q5K651 1589 aa16.81■□□□□ 0.28
UBE2F-SCLY-201ENST00000449191 TEX14Q8IWB6 1497 aa16.79■□□□□ 0.28
UBE2F-SCLY-201ENST00000449191 CFAP43Q8NDM7 1665 aa16.75■□□□□ 0.27
UBE2F-SCLY-201ENST00000449191 KIF21BO75037 1637 aa16.74■□□□□ 0.27
UBE2F-SCLY-201ENST00000449191 P3H3Q8IVL6 736 aa16.73■□□□□ 0.27
UBE2F-SCLY-201ENST00000449191 RAPGEF6Q8TEU7 1601 aa16.72■□□□□ 0.27
UBE2F-SCLY-201ENST00000449191 FAM9AQ8IZU1 332 aaPredicted RBP16.72■□□□□ 0.27
UBE2F-SCLY-201ENST00000449191 COL17A1Q9UMD9 1497 aaPredicted RBP16.72■□□□□ 0.27
UBE2F-SCLY-201ENST00000449191 MAGI3Q5TCQ9 1506 aa16.7■□□□□ 0.26
UBE2F-SCLY-201ENST00000449191 ATP10BO94823 1461 aa16.7■□□□□ 0.26
UBE2F-SCLY-201ENST00000449191 CD109Q6YHK3 1445 aa16.7■□□□□ 0.26
UBE2F-SCLY-201ENST00000449191 KCNH8Q96L42 1107 aa16.67■□□□□ 0.26
UBE2F-SCLY-201ENST00000449191 EFCAB5A4FU69 1503 aa16.66■□□□□ 0.26
UBE2F-SCLY-201ENST00000449191 ARID3CA6NKF2 412 aa16.66■□□□□ 0.26
UBE2F-SCLY-201ENST00000449191 FHOD3Q2V2M9 1422 aa16.66■□□□□ 0.26
UBE2F-SCLY-201ENST00000449191 KDM4FA0A1W2PPD8 638 aa16.65■□□□□ 0.26
UBE2F-SCLY-201ENST00000449191 NUP153P49790 1475 aaKnown RBP16.64■□□□□ 0.25
UBE2F-SCLY-201ENST00000449191 ABCA9Q8IUA7 1624 aa16.63■□□□□ 0.25
UBE2F-SCLY-201ENST00000449191 RANGAP1P46060 587 aaPredicted RBP16.62■□□□□ 0.25
UBE2F-SCLY-201ENST00000449191 CHIC1Q5VXU3 224 aa16.61■□□□□ 0.25
UBE2F-SCLY-201ENST00000449191 ADGRL1O94910 1474 aa16.6■□□□□ 0.25
UBE2F-SCLY-201ENST00000449191 ARAP3Q8WWN8 1544 aa16.57■□□□□ 0.24
UBE2F-SCLY-201ENST00000449191 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.56■□□□□ 0.24
UBE2F-SCLY-201ENST00000449191 HNRNPUL2Q1KMD3 747 aaKnown RBP16.56■□□□□ 0.24
UBE2F-SCLY-201ENST00000449191 PHLDB1Q86UU1 1377 aa16.53■□□□□ 0.24
UBE2F-SCLY-201ENST00000449191 NEO1Q92859 1461 aa16.52■□□□□ 0.23
UBE2F-SCLY-201ENST00000449191 UBTFP17480 764 aaKnown RBP16.51■□□□□ 0.23
UBE2F-SCLY-201ENST00000449191 ARHGAP35Q9NRY4 1499 aa16.49■□□□□ 0.23
UBE2F-SCLY-201ENST00000449191 EHMT2Q96KQ7 1210 aa16.49■□□□□ 0.23
UBE2F-SCLY-201ENST00000449191 CDK13Q14004 1512 aaKnown RBP16.49■□□□□ 0.23
UBE2F-SCLY-201ENST00000449191 HECW1Q76N89 1606 aa16.48■□□□□ 0.23
UBE2F-SCLY-201ENST00000449191 FMN1Q68DA7 1419 aa16.48■□□□□ 0.23
UBE2F-SCLY-201ENST00000449191 PLEKHD1A6NEE1 506 aa16.48■□□□□ 0.23
UBE2F-SCLY-201ENST00000449191 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.47■□□□□ 0.232e-6■■■□□ 16.6
UBE2F-SCLY-201ENST00000449191 FRMPD1Q5SYB0 1578 aa16.47■□□□□ 0.23
UBE2F-SCLY-201ENST00000449191 TTC37Q6PGP7 1564 aa16.47■□□□□ 0.23
UBE2F-SCLY-201ENST00000449191 CFAP74Q9C0B2 1584 aa16.47■□□□□ 0.23
UBE2F-SCLY-201ENST00000449191 RICTORQ6R327 1708 aa16.42■□□□□ 0.22
UBE2F-SCLY-201ENST00000449191 FANCAO15360 1455 aa16.42■□□□□ 0.22
UBE2F-SCLY-201ENST00000449191 RAPGEF3O95398 923 aa16.41■□□□□ 0.22
UBE2F-SCLY-201ENST00000449191 AKNAQ7Z591 1439 aa16.4■□□□□ 0.22
UBE2F-SCLY-201ENST00000449191 DENND4BO75064 1496 aaPredicted RBP16.4■□□□□ 0.22
UBE2F-SCLY-201ENST00000449191 ARHGEF40Q8TER5 1519 aa16.4■□□□□ 0.22
UBE2F-SCLY-201ENST00000449191 LRRIQ1Q96JM4 1722 aa16.38■□□□□ 0.21
UBE2F-SCLY-201ENST00000449191 ATP1B4Q9UN42 357 aaPredicted RBP16.37■□□□□ 0.21
UBE2F-SCLY-201ENST00000449191 KIF14Q15058 1648 aa16.37■□□□□ 0.21
UBE2F-SCLY-201ENST00000449191 MYO5CQ9NQX4 1742 aa16.36■□□□□ 0.21
UBE2F-SCLY-201ENST00000449191 ZMYM4Q5VZL5 1548 aa16.36■□□□□ 0.21
UBE2F-SCLY-201ENST00000449191 ADAMTSL3P82987 1691 aa16.36■□□□□ 0.21
UBE2F-SCLY-201ENST00000449191 PCF11O94913 1555 aaKnown RBP16.35■□□□□ 0.21
UBE2F-SCLY-201ENST00000449191 HECW2Q9P2P5 1572 aa16.35■□□□□ 0.21
UBE2F-SCLY-201ENST00000449191 PLCH2O75038 1416 aa16.35■□□□□ 0.21
UBE2F-SCLY-201ENST00000449191 BCORL1Q5H9F3 1711 aa16.34■□□□□ 0.21
UBE2F-SCLY-201ENST00000449191 CDK11AQ9UQ88 783 aaPredicted RBP16.34■□□□□ 0.21
UBE2F-SCLY-201ENST00000449191 TROQ12816 1431 aaPredicted RBP16.34■□□□□ 0.21
UBE2F-SCLY-201ENST00000449191 CLIP1P30622 1438 aa16.32■□□□□ 0.2
UBE2F-SCLY-201ENST00000449191 ZFYVE16Q7Z3T8 1539 aa16.31■□□□□ 0.2
UBE2F-SCLY-201ENST00000449191 CCDC18Q5T9S5 1454 aa16.31■□□□□ 0.2
UBE2F-SCLY-201ENST00000449191 CASKIN1Q8WXD9 1431 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms