RNA–Protein interactions for RNA: ENST00000448850.5

APP-210, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 1,846 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-210ENST00000448850 CEP170Q5SW79 1584 aa23.55■■□□□ 1.36
APP-210ENST00000448850 NUP160Q12769 1436 aa23.52■■□□□ 1.36
APP-210ENST00000448850 IQGAP2Q13576 1575 aa23.47■■□□□ 1.35
APP-210ENST00000448850 KIAA0586Q9BVV6 1533 aa23.47■■□□□ 1.35
APP-210ENST00000448850 CEP162Q5TB80 1403 aa23.42■■□□□ 1.34
APP-210ENST00000448850 CLASP1Q7Z460 1538 aa23.38■■□□□ 1.33
APP-210ENST00000448850 RANGAP1P46060 587 aaPredicted RBP23.37■■□□□ 1.33
APP-210ENST00000448850 CLIP1P30622 1438 aa23.36■■□□□ 1.33
APP-210ENST00000448850 UGGT2Q9NYU1 1516 aa23.34■■□□□ 1.33
APP-210ENST00000448850 OSCARQ8IYS5 282 aa23.33■■□□□ 1.33
APP-210ENST00000448850 SHROOM2Q13796 1616 aa23.32■■□□□ 1.32
APP-210ENST00000448850 SAMD9Q5K651 1589 aa23.32■■□□□ 1.32
APP-210ENST00000448850 EFCAB5A4FU69 1503 aa23.32■■□□□ 1.32
APP-210ENST00000448850 ARHGAP35Q9NRY4 1499 aa23.29■■□□□ 1.32
APP-210ENST00000448850 JPH4Q96JJ6 628 aa23.29■■□□□ 1.32
APP-210ENST00000448850 KIAA0556O60303 1618 aa23.24■■□□□ 1.31
APP-210ENST00000448850 DISP1Q96F81 1524 aa23.24■■□□□ 1.31
APP-210ENST00000448850 ARAP1Q96P48 1450 aa23.21■■□□□ 1.31
APP-210ENST00000448850 PRG4Q92954 1404 aaPredicted RBP23.2■■□□□ 1.3
APP-210ENST00000448850 CARMIL2Q6F5E8 1435 aa23.19■■□□□ 1.3
APP-210ENST00000448850 P3H3Q8IVL6 736 aa23.19■■□□□ 1.3
APP-210ENST00000448850 FHOD3Q2V2M9 1422 aa23.17■■□□□ 1.3
APP-210ENST00000448850 ERCC6L2Q5T890 1561 aa23.14■■□□□ 1.29
APP-210ENST00000448850 VPS8Q8N3P4 1428 aa23.09■■□□□ 1.29
APP-210ENST00000448850 FMN1Q68DA7 1419 aa23.07■■□□□ 1.28
APP-210ENST00000448850 PCF11O94913 1555 aaKnown RBP23.01■■□□□ 1.27
APP-210ENST00000448850 TTBK1Q5TCY1 1321 aaPredicted RBP23.01■■□□□ 1.27
APP-210ENST00000448850 PTPRGP23470 1445 aa23■■□□□ 1.27
APP-210ENST00000448850 ARHGEF11O15085 1522 aa22.98■■□□□ 1.27
APP-210ENST00000448850 RAPGEF6Q8TEU7 1601 aa22.97■■□□□ 1.27
APP-210ENST00000448850 CASKIN1Q8WXD9 1431 aa22.97■■□□□ 1.27
APP-210ENST00000448850 FYCO1Q9BQS8 1478 aa22.95■■□□□ 1.27
APP-210ENST00000448850 RIMBP3CA6NJZ7 1639 aa22.95■■□□□ 1.26
APP-210ENST00000448850 RIMBP3BA6NNM3 1639 aa22.95■■□□□ 1.26
APP-210ENST00000448850 RIMBP3Q9UFD9 1639 aa22.95■■□□□ 1.26
APP-210ENST00000448850 ABCA8O94911 1581 aa22.93■■□□□ 1.26
APP-210ENST00000448850 LRRIQ1Q96JM4 1722 aa22.93■■□□□ 1.26
APP-210ENST00000448850 HECW1Q76N89 1606 aa22.93■■□□□ 1.26
APP-210ENST00000448850 PLB1Q6P1J6 1458 aa22.92■■□□□ 1.26
APP-210ENST00000448850 ATP1B4Q9UN42 357 aaPredicted RBP22.88■■□□□ 1.25
APP-210ENST00000448850 UACAQ9BZF9 1416 aa22.87■■□□□ 1.25
APP-210ENST00000448850 CFAP43Q8NDM7 1665 aa22.85■■□□□ 1.25
APP-210ENST00000448850 NUP153P49790 1475 aaKnown RBP22.85■■□□□ 1.25
APP-210ENST00000448850 ABCC2Q92887 1545 aa22.84■■□□□ 1.25
APP-210ENST00000448850 APLP2Q06481 763 aa22.82■■□□□ 1.24
APP-210ENST00000448850 TIAM1Q13009 1591 aa22.82■■□□□ 1.24
APP-210ENST00000448850 EPRSP07814 1512 aaKnown RBP22.82■■□□□ 1.24
APP-210ENST00000448850 MAP3K1Q13233 1512 aa22.82■■□□□ 1.24
APP-210ENST00000448850 UHRF1BP1LA0JNW5 1464 aa22.81■■□□□ 1.24
APP-210ENST00000448850 CCDC18Q5T9S5 1454 aa22.81■■□□□ 1.24
APP-210ENST00000448850 ADCY10Q96PN6 1610 aa22.8■■□□□ 1.24
APP-210ENST00000448850 CDK13Q14004 1512 aaKnown RBP22.77■■□□□ 1.24
APP-210ENST00000448850 ARID3CA6NKF2 412 aa22.74■■□□□ 1.23
APP-210ENST00000448850 ATP10BO94823 1461 aa22.73■■□□□ 1.23
APP-210ENST00000448850 ZCCHC11Q5TAX3 1644 aaKnown RBP22.72■■□□□ 1.23
APP-210ENST00000448850 CYB5RLQ6IPT4 315 aa22.72■■□□□ 1.23
APP-210ENST00000448850 KDM5BQ9UGL1 1544 aa22.71■■□□□ 1.23
APP-210ENST00000448850 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.68■■□□□ 1.22
APP-210ENST00000448850 HNRNPUL2Q1KMD3 747 aaKnown RBP22.68■■□□□ 1.22
APP-210ENST00000448850 LRRC9Q6ZRR7 1453 aa22.68■■□□□ 1.22
APP-210ENST00000448850 KANK4Q5T7N3 995 aaPredicted RBP22.68■■□□□ 1.22
APP-210ENST00000448850 PPARGC1BQ86YN6 1023 aaKnown RBP22.68■■□□□ 1.22
APP-210ENST00000448850 DNAJC5Q9H3Z4 198 aa22.68■■□□□ 1.22
APP-210ENST00000448850 MAGI3Q5TCQ9 1506 aa22.65■■□□□ 1.22
APP-210ENST00000448850 CDK11AQ9UQ88 783 aaPredicted RBP22.64■■□□□ 1.21
APP-210ENST00000448850 EHBP1L1Q8N3D4 1523 aa22.63■■□□□ 1.21
APP-210ENST00000448850 MTUS2Q5JR59 1369 aa22.63■■□□□ 1.21
APP-210ENST00000448850 SUPT6HQ7KZ85 1726 aaKnown RBP22.6■■□□□ 1.21
APP-210ENST00000448850 NPM1P06748 294 aaKnown RBP eCLIP22.59■■□□□ 1.21
APP-210ENST00000448850 PLEKHD1A6NEE1 506 aa22.59■■□□□ 1.21
APP-210ENST00000448850 TROQ12816 1431 aaPredicted RBP22.58■■□□□ 1.2
APP-210ENST00000448850 KIF14Q15058 1648 aa22.52■■□□□ 1.2
APP-210ENST00000448850 ASXL2Q76L83 1435 aa22.5■■□□□ 1.19
APP-210ENST00000448850 NCOA2Q15596 1464 aa22.5■■□□□ 1.19
APP-210ENST00000448850 WDR7Q9Y4E6 1490 aa22.5■■□□□ 1.19
APP-210ENST00000448850 MAPKBP1O60336 1514 aa22.49■■□□□ 1.19
APP-210ENST00000448850 KCNH8Q96L42 1107 aa22.43■■□□□ 1.18
APP-210ENST00000448850 CDC42BPAQ5VT25 1732 aa22.42■■□□□ 1.18
APP-210ENST00000448850 PHLDB1Q86UU1 1377 aa22.42■■□□□ 1.18
APP-210ENST00000448850 ABCC10Q5T3U5 1492 aa22.42■■□□□ 1.18
APP-210ENST00000448850 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.41■■□□□ 1.18
APP-210ENST00000448850 ITSN2Q9NZM3 1697 aa22.41■■□□□ 1.18
APP-210ENST00000448850 TTC37Q6PGP7 1564 aa22.4■■□□□ 1.18
APP-210ENST00000448850 MYO5CQ9NQX4 1742 aa22.39■■□□□ 1.17
APP-210ENST00000448850 ABCA9Q8IUA7 1624 aa22.38■■□□□ 1.17
APP-210ENST00000448850 MYOM3Q5VTT5 1437 aa22.37■■□□□ 1.17
APP-210ENST00000448850 CCNB3Q8WWL7 1395 aa22.37■■□□□ 1.17
APP-210ENST00000448850 CDC42BPBQ9Y5S2 1711 aa22.35■■□□□ 1.17
APP-210ENST00000448850 PREX2Q70Z35 1606 aa22.34■■□□□ 1.17
APP-210ENST00000448850 GPATCH8Q9UKJ3 1502 aaKnown RBP22.34■■□□□ 1.17
APP-210ENST00000448850 DIP2BQ9P265 1576 aa22.32■■□□□ 1.16
APP-210ENST00000448850 FGD6Q6ZV73 1430 aa22.32■■□□□ 1.16
APP-210ENST00000448850 RRBP1Q9P2E9 1410 aaKnown RBP22.32■■□□□ 1.16
APP-210ENST00000448850 TRIM26Q12899 539 aaPredicted RBP22.31■■□□□ 1.16
APP-210ENST00000448850 KIF13AQ9H1H9 1805 aa22.31■■□□□ 1.16
APP-210ENST00000448850 GLI2P10070 1586 aa22.3■■□□□ 1.16
APP-210ENST00000448850 MIA2Q96PC5 1412 aa22.3■■□□□ 1.16
APP-210ENST00000448850 PTPN23Q9H3S7 1636 aa22.29■■□□□ 1.16
APP-210ENST00000448850 MAP3K4Q9Y6R4 1608 aa22.26■■□□□ 1.15
APP-210ENST00000448850 PLCH2O75038 1416 aa22.25■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms