RNA–Protein interactions for RNA: ENST00000448789.2

RAB5B-202, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB5B, Length 1,530 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-202ENST00000448789 ARHGAP35Q9NRY4 1499 aa23.91■■□□□ 1.42
RAB5B-202ENST00000448789 ARAP1Q96P48 1450 aa23.9■■□□□ 1.42
RAB5B-202ENST00000448789 CHMP7Q8WUX9 453 aaPredicted RBP23.84■■□□□ 1.41
RAB5B-202ENST00000448789 FBLN2P98095 1184 aa23.82■■□□□ 1.4
RAB5B-202ENST00000448789 VPS8Q8N3P4 1428 aa23.82■■□□□ 1.4
RAB5B-202ENST00000448789 CEP170Q5SW79 1584 aa23.81■■□□□ 1.4
RAB5B-202ENST00000448789 IQGAP2Q13576 1575 aa23.8■■□□□ 1.4
RAB5B-202ENST00000448789 NUP160Q12769 1436 aa23.77■■□□□ 1.4
RAB5B-202ENST00000448789 KIAA0586Q9BVV6 1533 aa23.77■■□□□ 1.4
RAB5B-202ENST00000448789 EFCAB5A4FU69 1503 aa23.76■■□□□ 1.39
RAB5B-202ENST00000448789 SAMD9Q5K651 1589 aa23.74■■□□□ 1.39
RAB5B-202ENST00000448789 CHD1O14646 1710 aa23.74■■□□□ 1.39
RAB5B-202ENST00000448789 FHOD3Q2V2M9 1422 aa23.73■■□□□ 1.39
RAB5B-202ENST00000448789 P3H3Q8IVL6 736 aa23.73■■□□□ 1.39
RAB5B-202ENST00000448789 UGGT2Q9NYU1 1516 aa23.69■■□□□ 1.38
RAB5B-202ENST00000448789 PPARGC1BQ86YN6 1023 aaKnown RBP23.66■■□□□ 1.38
RAB5B-202ENST00000448789 DISP1Q96F81 1524 aa23.61■■□□□ 1.37
RAB5B-202ENST00000448789 PCF11O94913 1555 aaKnown RBP23.59■■□□□ 1.37
RAB5B-202ENST00000448789 KIAA0556O60303 1618 aa23.58■■□□□ 1.36
RAB5B-202ENST00000448789 JPH4Q96JJ6 628 aa23.53■■□□□ 1.36
RAB5B-202ENST00000448789 FMN1Q68DA7 1419 aa23.53■■□□□ 1.36
RAB5B-202ENST00000448789 TTBK1Q5TCY1 1321 aaPredicted RBP23.52■■□□□ 1.36
RAB5B-202ENST00000448789 CASKIN1Q8WXD9 1431 aa23.5■■□□□ 1.35
RAB5B-202ENST00000448789 CLASP1Q7Z460 1538 aa23.49■■□□□ 1.35
RAB5B-202ENST00000448789 FYCO1Q9BQS8 1478 aa23.49■■□□□ 1.35
RAB5B-202ENST00000448789 APLP2Q06481 763 aa23.46■■□□□ 1.35
RAB5B-202ENST00000448789 SHROOM2Q13796 1616 aa23.46■■□□□ 1.35
RAB5B-202ENST00000448789 CARMIL2Q6F5E8 1435 aa23.43■■□□□ 1.34
RAB5B-202ENST00000448789 PRG4Q92954 1404 aaPredicted RBP23.43■■□□□ 1.34
RAB5B-202ENST00000448789 TIAM1Q13009 1591 aa23.42■■□□□ 1.34
RAB5B-202ENST00000448789 KANK4Q5T7N3 995 aaPredicted RBP23.42■■□□□ 1.34
RAB5B-202ENST00000448789 TRIM26Q12899 539 aaPredicted RBP23.41■■□□□ 1.34
RAB5B-202ENST00000448789 ATP1B4Q9UN42 357 aaPredicted RBP23.4■■□□□ 1.34
RAB5B-202ENST00000448789 MAP3K1Q13233 1512 aa23.4■■□□□ 1.34
RAB5B-202ENST00000448789 CFAP43Q8NDM7 1665 aa23.39■■□□□ 1.34
RAB5B-202ENST00000448789 PCGF6Q9BYE7 350 aa23.39■■□□□ 1.34
RAB5B-202ENST00000448789 LRRIQ1Q96JM4 1722 aa23.38■■□□□ 1.33
RAB5B-202ENST00000448789 ERCC6L2Q5T890 1561 aa23.38■■□□□ 1.33
RAB5B-202ENST00000448789 HECW1Q76N89 1606 aa23.33■■□□□ 1.33
RAB5B-202ENST00000448789 PLB1Q6P1J6 1458 aa23.31■■□□□ 1.32
RAB5B-202ENST00000448789 LRRC9Q6ZRR7 1453 aa23.31■■□□□ 1.32
RAB5B-202ENST00000448789 RAPGEF6Q8TEU7 1601 aa23.3■■□□□ 1.32
RAB5B-202ENST00000448789 NUP153P49790 1475 aaKnown RBP23.28■■□□□ 1.32
RAB5B-202ENST00000448789 EPRSP07814 1512 aaKnown RBP23.27■■□□□ 1.32
RAB5B-202ENST00000448789 CDK13Q14004 1512 aaKnown RBP23.27■■□□□ 1.32
RAB5B-202ENST00000448789 OSCARQ8IYS5 282 aa23.26■■□□□ 1.31
RAB5B-202ENST00000448789 PTPRGP23470 1445 aa23.25■■□□□ 1.31
RAB5B-202ENST00000448789 CCDC18Q5T9S5 1454 aa23.25■■□□□ 1.31
RAB5B-202ENST00000448789 ABCA8O94911 1581 aa23.25■■□□□ 1.31
RAB5B-202ENST00000448789 ARID3CA6NKF2 412 aa23.23■■□□□ 1.31
RAB5B-202ENST00000448789 MAGI3Q5TCQ9 1506 aa23.21■■□□□ 1.31
RAB5B-202ENST00000448789 MTUS2Q5JR59 1369 aa23.16■■□□□ 1.3
RAB5B-202ENST00000448789 EHBP1L1Q8N3D4 1523 aa23.14■■□□□ 1.3
RAB5B-202ENST00000448789 PHLDB1Q86UU1 1377 aa23.12■■□□□ 1.29
RAB5B-202ENST00000448789 UACAQ9BZF9 1416 aa23.12■■□□□ 1.29
RAB5B-202ENST00000448789 ATP10BO94823 1461 aa23.08■■□□□ 1.29
RAB5B-202ENST00000448789 ABCC2Q92887 1545 aa23.07■■□□□ 1.28
RAB5B-202ENST00000448789 RRBP1Q9P2E9 1410 aaKnown RBP23.07■■□□□ 1.28
RAB5B-202ENST00000448789 NCOA2Q15596 1464 aa23.06■■□□□ 1.28
RAB5B-202ENST00000448789 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.05■■□□□ 1.28
RAB5B-202ENST00000448789 HNRNPUL2Q1KMD3 747 aaKnown RBP23.05■■□□□ 1.28
RAB5B-202ENST00000448789 SUPT6HQ7KZ85 1726 aaKnown RBP23.04■■□□□ 1.28
RAB5B-202ENST00000448789 ARHGEF11O15085 1522 aa23.04■■□□□ 1.28
RAB5B-202ENST00000448789 DNAJC5Q9H3Z4 198 aa23.01■■□□□ 1.27
RAB5B-202ENST00000448789 UHRF1BP1LA0JNW5 1464 aa23■■□□□ 1.27
RAB5B-202ENST00000448789 TROQ12816 1431 aaPredicted RBP23■■□□□ 1.27
RAB5B-202ENST00000448789 CCNB3Q8WWL7 1395 aa23■■□□□ 1.27
RAB5B-202ENST00000448789 CDK11AQ9UQ88 783 aaPredicted RBP22.97■■□□□ 1.27
RAB5B-202ENST00000448789 ADCY10Q96PN6 1610 aa22.96■■□□□ 1.27
RAB5B-202ENST00000448789 KIF14Q15058 1648 aa22.95■■□□□ 1.26
RAB5B-202ENST00000448789 MYOM3Q5VTT5 1437 aa22.94■■□□□ 1.26
RAB5B-202ENST00000448789 FGD6Q6ZV73 1430 aa22.94■■□□□ 1.26
RAB5B-202ENST00000448789 KDM5BQ9UGL1 1544 aa22.93■■□□□ 1.26
RAB5B-202ENST00000448789 ZCCHC11Q5TAX3 1644 aaKnown RBP22.92■■□□□ 1.26
RAB5B-202ENST00000448789 PLEKHD1A6NEE1 506 aa22.9■■□□□ 1.26
RAB5B-202ENST00000448789 FAM50AQ14320 339 aaKnown RBP22.86■■□□□ 1.25
RAB5B-202ENST00000448789 RIMBP3CA6NJZ7 1639 aa22.85■■□□□ 1.25
RAB5B-202ENST00000448789 RIMBP3BA6NNM3 1639 aa22.85■■□□□ 1.25
RAB5B-202ENST00000448789 RIMBP3Q9UFD9 1639 aa22.85■■□□□ 1.25
RAB5B-202ENST00000448789 ABCC10Q5T3U5 1492 aa22.84■■□□□ 1.25
RAB5B-202ENST00000448789 PTPN23Q9H3S7 1636 aa22.83■■□□□ 1.25
RAB5B-202ENST00000448789 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.82■■□□□ 1.24
RAB5B-202ENST00000448789 GPATCH8Q9UKJ3 1502 aaKnown RBP22.8■■□□□ 1.24
RAB5B-202ENST00000448789 TCOF1Q13428 1488 aaKnown RBP22.8■■□□□ 1.24
RAB5B-202ENST00000448789 MIA2Q96PC5 1412 aa22.8■■□□□ 1.24
RAB5B-202ENST00000448789 ITGAEP38570 1179 aa22.8■■□□□ 1.24
RAB5B-202ENST00000448789 ITSN2Q9NZM3 1697 aa22.76■■□□□ 1.23
RAB5B-202ENST00000448789 TTC37Q6PGP7 1564 aa22.75■■□□□ 1.23
RAB5B-202ENST00000448789 CDC42BPAQ5VT25 1732 aa22.75■■□□□ 1.23
RAB5B-202ENST00000448789 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.74■■□□□ 1.23
RAB5B-202ENST00000448789 WDR7Q9Y4E6 1490 aa22.72■■□□□ 1.23
RAB5B-202ENST00000448789 ZNF644Q9H582 1327 aaPredicted RBP22.72■■□□□ 1.23
RAB5B-202ENST00000448789 PTPRKQ15262 1439 aa22.72■■□□□ 1.23
RAB5B-202ENST00000448789 CYB5RLQ6IPT4 315 aa22.71■■□□□ 1.23
RAB5B-202ENST00000448789 KCNH8Q96L42 1107 aa22.71■■□□□ 1.23
RAB5B-202ENST00000448789 ASXL2Q76L83 1435 aa22.7■■□□□ 1.22
RAB5B-202ENST00000448789 CFDP1Q9UEE9 299 aaPredicted RBP22.69■■□□□ 1.22
RAB5B-202ENST00000448789 CAMSAP2Q08AD1 1489 aa22.69■■□□□ 1.22
RAB5B-202ENST00000448789 PREX2Q70Z35 1606 aa22.68■■□□□ 1.22
RAB5B-202ENST00000448789 CDC42BPBQ9Y5S2 1711 aa22.64■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms