RNA–Protein interactions for RNA: ENST00000448549.1

TRA2A-203, Transcript of transformer 2 alpha homolog, humanhuman

TSL 4

Gene TRA2A, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-203ENST00000448549 RUSC2Q8N2Y8 1516 aa27.19■■□□□ 1.94
TRA2A-203ENST00000448549 KIAA0586Q9BVV6 1533 aa27.11■■□□□ 1.93
TRA2A-203ENST00000448549 NPM1P06748 294 aaKnown RBP eCLIP27.08■■□□□ 1.93
TRA2A-203ENST00000448549 AEBP2Q6ZN18 517 aaPredicted RBP27.06■■□□□ 1.92
TRA2A-203ENST00000448549 CUL7Q14999 1698 aa27.04■■□□□ 1.92
TRA2A-203ENST00000448549 CARMIL1Q5VZK9 1371 aa27.03■■□□□ 1.92
TRA2A-203ENST00000448549 FAM69CQ0P6D2 419 aa27.01■■□□□ 1.91
TRA2A-203ENST00000448549 ABCC10Q5T3U5 1492 aa26.96■■□□□ 1.91
TRA2A-203ENST00000448549 KIF13AQ9H1H9 1805 aa26.95■■□□□ 1.9
TRA2A-203ENST00000448549 ADCY10Q96PN6 1610 aa26.94■■□□□ 1.9
TRA2A-203ENST00000448549 MAPKBP1O60336 1514 aa26.93■■□□□ 1.9
TRA2A-203ENST00000448549 TTBK1Q5TCY1 1321 aaPredicted RBP26.92■■□□□ 1.9
TRA2A-203ENST00000448549 PTPRGP23470 1445 aa26.91■■□□□ 1.9
TRA2A-203ENST00000448549 CARMIL2Q6F5E8 1435 aa26.85■■□□□ 1.89
TRA2A-203ENST00000448549 DIP2BQ9P265 1576 aa26.84■■□□□ 1.89
TRA2A-203ENST00000448549 TNIKQ9UKE5 1360 aa26.84■■□□□ 1.89
TRA2A-203ENST00000448549 IQGAP2Q13576 1575 aa26.79■■□□□ 1.88
TRA2A-203ENST00000448549 RAPGEF2Q9Y4G8 1499 aa26.74■■□□□ 1.87
TRA2A-203ENST00000448549 ABCC2Q92887 1545 aa26.73■■□□□ 1.87
TRA2A-203ENST00000448549 DISP1Q96F81 1524 aa26.71■■□□□ 1.87
TRA2A-203ENST00000448549 UACAQ9BZF9 1416 aa26.68■■□□□ 1.86
TRA2A-203ENST00000448549 ASXL2Q76L83 1435 aa26.67■■□□□ 1.86
TRA2A-203ENST00000448549 UHRF1BP1LA0JNW5 1464 aa26.67■■□□□ 1.86
TRA2A-203ENST00000448549 UGGT2Q9NYU1 1516 aa26.64■■□□□ 1.85
TRA2A-203ENST00000448549 PLB1Q6P1J6 1458 aa26.63■■□□□ 1.85
TRA2A-203ENST00000448549 KDM6BO15054 1643 aa26.62■■□□□ 1.85
TRA2A-203ENST00000448549 TSPOAP1O95153 1857 aa26.58■■□□□ 1.85
TRA2A-203ENST00000448549 KDM5BQ9UGL1 1544 aa26.55■■□□□ 1.84
TRA2A-203ENST00000448549 KIAA0556O60303 1618 aa26.54■■□□□ 1.84
TRA2A-203ENST00000448549 GLI2P10070 1586 aa26.54■■□□□ 1.84
TRA2A-203ENST00000448549 KDM4FA0A1W2PPD8 638 aa26.5■■□□□ 1.83
TRA2A-203ENST00000448549 EPRSP07814 1512 aaKnown RBP26.49■■□□□ 1.83
TRA2A-203ENST00000448549 PRXQ9BXM0 1461 aa26.46■■□□□ 1.83
TRA2A-203ENST00000448549 ZCCHC11Q5TAX3 1644 aaKnown RBP26.43■■□□□ 1.82
TRA2A-203ENST00000448549 GOLGA3Q08378 1498 aa26.43■■□□□ 1.82
TRA2A-203ENST00000448549 PPRC1Q5VV67 1664 aaKnown RBP26.43■■□□□ 1.82
TRA2A-203ENST00000448549 CTTNBP2Q8WZ74 1663 aa26.39■■□□□ 1.82
TRA2A-203ENST00000448549 COL17A1Q9UMD9 1497 aaPredicted RBP26.38■■□□□ 1.81
TRA2A-203ENST00000448549 WDR7Q9Y4E6 1490 aa26.37■■□□□ 1.81
TRA2A-203ENST00000448549 MAP3K4Q9Y6R4 1608 aa26.36■■□□□ 1.81
TRA2A-203ENST00000448549 TEX14Q8IWB6 1497 aa26.35■■□□□ 1.81
TRA2A-203ENST00000448549 KCNH8Q96L42 1107 aa26.33■■□□□ 1.81
TRA2A-203ENST00000448549 ABCA8O94911 1581 aa26.33■■□□□ 1.8
TRA2A-203ENST00000448549 P3H3Q8IVL6 736 aa26.31■■□□□ 1.8
TRA2A-203ENST00000448549 CSRNP3Q8WYN3 585 aa26.3■■□□□ 1.8
TRA2A-203ENST00000448549 FAM9AQ8IZU1 332 aaPredicted RBP26.26■■□□□ 1.79
TRA2A-203ENST00000448549 CD109Q6YHK3 1445 aa26.25■■□□□ 1.79
TRA2A-203ENST00000448549 ARID3CA6NKF2 412 aa26.25■■□□□ 1.79
TRA2A-203ENST00000448549 ADGRL1O94910 1474 aa26.21■■□□□ 1.79
TRA2A-203ENST00000448549 MAGI3Q5TCQ9 1506 aa26.19■■□□□ 1.78
TRA2A-203ENST00000448549 ATP10BO94823 1461 aa26.17■■□□□ 1.78
TRA2A-203ENST00000448549 CFAP43Q8NDM7 1665 aa26.12■■□□□ 1.77
TRA2A-203ENST00000448549 RANGAP1P46060 587 aaPredicted RBP26.12■■□□□ 1.77
TRA2A-203ENST00000448549 EEA1Q15075 1411 aa26.1■■□□□ 1.77
TRA2A-203ENST00000448549 SAMD9Q5K651 1589 aa26.09■■□□□ 1.77
TRA2A-203ENST00000448549 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.07■■□□□ 1.76
TRA2A-203ENST00000448549 HNRNPUL2Q1KMD3 747 aaKnown RBP26.07■■□□□ 1.76
TRA2A-203ENST00000448549 RAPGEF6Q8TEU7 1601 aa26■■□□□ 1.75
TRA2A-203ENST00000448549 FHOD3Q2V2M9 1422 aa26■■□□□ 1.75
TRA2A-203ENST00000448549 ARAP3Q8WWN8 1544 aa25.99■■□□□ 1.75
TRA2A-203ENST00000448549 NUP153P49790 1475 aaKnown RBP25.98■■□□□ 1.75
TRA2A-203ENST00000448549 ABCA9Q8IUA7 1624 aa25.96■■□□□ 1.75
TRA2A-203ENST00000448549 PHLDB1Q86UU1 1377 aa25.95■■□□□ 1.74
TRA2A-203ENST00000448549 RAPGEF3O95398 923 aa25.93■■□□□ 1.74
TRA2A-203ENST00000448549 PLEKHD1A6NEE1 506 aa25.9■■□□□ 1.74
TRA2A-203ENST00000448549 NEO1Q92859 1461 aa25.88■■□□□ 1.73
TRA2A-203ENST00000448549 EHMT2Q96KQ7 1210 aa25.86■■□□□ 1.73
TRA2A-203ENST00000448549 KIF21BO75037 1637 aa25.85■■□□□ 1.73
TRA2A-203ENST00000448549 HECW2Q9P2P5 1572 aa25.83■■□□□ 1.73
TRA2A-203ENST00000448549 EFCAB5A4FU69 1503 aa25.83■■□□□ 1.72
TRA2A-203ENST00000448549 UBTFP17480 764 aaKnown RBP25.81■■□□□ 1.72
TRA2A-203ENST00000448549 CHIC1Q5VXU3 224 aa25.77■■□□□ 1.72
TRA2A-203ENST00000448549 ILDR1Q86SU0 546 aaPredicted RBP25.76■■□□□ 1.71
TRA2A-203ENST00000448549 ARID4BQ4LE39 1312 aaPredicted RBP25.74■■□□□ 1.71
TRA2A-203ENST00000448549 FRMPD1Q5SYB0 1578 aa25.73■■□□□ 1.71
TRA2A-203ENST00000448549 AKNAQ7Z591 1439 aa25.73■■□□□ 1.71
TRA2A-203ENST00000448549 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.73■■□□□ 1.719e-16■■■■□ 20.9
TRA2A-203ENST00000448549 FANCAO15360 1455 aa25.72■■□□□ 1.71
TRA2A-203ENST00000448549 DENND4BO75064 1496 aaPredicted RBP25.72■■□□□ 1.71
TRA2A-203ENST00000448549 ATP1B4Q9UN42 357 aaPredicted RBP25.72■■□□□ 1.71
TRA2A-203ENST00000448549 CDK13Q14004 1512 aaKnown RBP25.71■■□□□ 1.71
TRA2A-203ENST00000448549 PTPRMP28827 1452 aa25.68■■□□□ 1.7
TRA2A-203ENST00000448549 TTC37Q6PGP7 1564 aa25.66■■□□□ 1.7
TRA2A-203ENST00000448549 ADAMTSL3P82987 1691 aa25.65■■□□□ 1.7
TRA2A-203ENST00000448549 FMN1Q68DA7 1419 aa25.65■■□□□ 1.7
TRA2A-203ENST00000448549 ARHGAP35Q9NRY4 1499 aa25.65■■□□□ 1.7
TRA2A-203ENST00000448549 CFAP74Q9C0B2 1584 aa25.61■■□□□ 1.69
TRA2A-203ENST00000448549 ARHGEF40Q8TER5 1519 aa25.6■■□□□ 1.69
TRA2A-203ENST00000448549 PLCH2O75038 1416 aa25.6■■□□□ 1.69
TRA2A-203ENST00000448549 CDK11AQ9UQ88 783 aaPredicted RBP25.59■■□□□ 1.69
TRA2A-203ENST00000448549 RICTORQ6R327 1708 aa25.59■■□□□ 1.69
TRA2A-203ENST00000448549 BCORL1Q5H9F3 1711 aa25.58■■□□□ 1.69
TRA2A-203ENST00000448549 SCAPERQ9BY12 1400 aa25.57■■□□□ 1.68
TRA2A-203ENST00000448549 HECW1Q76N89 1606 aa25.56■■□□□ 1.68
TRA2A-203ENST00000448549 YEATS2Q9ULM3 1422 aa25.56■■□□□ 1.68
TRA2A-203ENST00000448549 MADDQ8WXG6 1647 aa25.55■■□□□ 1.68
TRA2A-203ENST00000448549 ZMYM4Q5VZL5 1548 aa25.54■■□□□ 1.68
TRA2A-203ENST00000448549 EFCAB2Q5VUJ9 269 aa25.54■■□□□ 1.68
TRA2A-203ENST00000448549 ZFYVE16Q7Z3T8 1539 aa25.53■■□□□ 1.68
TRA2A-203ENST00000448549 POGZQ7Z3K3 1410 aa25.52■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms