RNA–Protein interactions for RNA: ENST00000448526.6

CDKN1A-204, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CDKN1A, Length 2,104 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-204ENST00000448526 GAPVD1Q14C86 1478 aa25.59■■□□□ 1.69
CDKN1A-204ENST00000448526 PCF11O94913 1555 aaKnown RBP25.57■■□□□ 1.68
CDKN1A-204ENST00000448526 FHOD3Q2V2M9 1422 aa25.57■■□□□ 1.68
CDKN1A-204ENST00000448526 FHAD1B1AJZ9 1412 aa25.56■■□□□ 1.68
CDKN1A-204ENST00000448526 TARBP1Q13395 1621 aaKnown RBP25.56■■□□□ 1.68
CDKN1A-204ENST00000448526 CCNB3Q8WWL7 1395 aa25.54■■□□□ 1.68
CDKN1A-204ENST00000448526 EFCAB5A4FU69 1503 aa25.54■■□□□ 1.68
CDKN1A-204ENST00000448526 LRRC9Q6ZRR7 1453 aa25.53■■□□□ 1.68
CDKN1A-204ENST00000448526 CFAP43Q8NDM7 1665 aa25.5■■□□□ 1.67
CDKN1A-204ENST00000448526 DHX57Q6P158 1386 aaKnown RBP25.45■■□□□ 1.66
CDKN1A-204ENST00000448526 FYCO1Q9BQS8 1478 aa25.44■■□□□ 1.66
CDKN1A-204ENST00000448526 CASKIN1Q8WXD9 1431 aa25.42■■□□□ 1.66
CDKN1A-204ENST00000448526 MRC2Q9UBG0 1479 aa25.42■■□□□ 1.66
CDKN1A-204ENST00000448526 ATP1B4Q9UN42 357 aaPredicted RBP25.42■■□□□ 1.66
CDKN1A-204ENST00000448526 PHLDB1Q86UU1 1377 aa25.42■■□□□ 1.66
CDKN1A-204ENST00000448526 AQRO60306 1485 aaKnown RBP eCLIP25.42■■□□□ 1.664e-7■■■■■ 34
CDKN1A-204ENST00000448526 DIEXFQ68CQ4 756 aaKnown RBP25.4■■□□□ 1.66
CDKN1A-204ENST00000448526 SAMD9Q5K651 1589 aa25.39■■□□□ 1.66
CDKN1A-204ENST00000448526 ITGAEP38570 1179 aa25.39■■□□□ 1.65
CDKN1A-204ENST00000448526 PBRM1Q86U86 1689 aa25.38■■□□□ 1.65
CDKN1A-204ENST00000448526 ZNF316A6NFI3 1004 aaPredicted RBP25.37■■□□□ 1.65
CDKN1A-204ENST00000448526 SNAPC4Q5SXM2 1469 aa25.35■■□□□ 1.65
CDKN1A-204ENST00000448526 FMN1Q68DA7 1419 aa25.35■■□□□ 1.65
CDKN1A-204ENST00000448526 CLSPNQ9HAW4 1339 aa25.33■■□□□ 1.65
CDKN1A-204ENST00000448526 LRRIQ1Q96JM4 1722 aa25.28■■□□□ 1.64
CDKN1A-204ENST00000448526 ADAMTS12P58397 1594 aa25.27■■□□□ 1.64
CDKN1A-204ENST00000448526 WDR62O43379 1518 aa25.25■■□□□ 1.63
CDKN1A-204ENST00000448526 RAB3GAP2Q9H2M9 1393 aa25.24■■□□□ 1.63
CDKN1A-204ENST00000448526 ZNF608Q9ULD9 1512 aaPredicted RBP25.24■■□□□ 1.63
CDKN1A-204ENST00000448526 FAM50AQ14320 339 aaKnown RBP25.24■■□□□ 1.63
CDKN1A-204ENST00000448526 GRIN2BQ13224 1484 aa25.23■■□□□ 1.63
CDKN1A-204ENST00000448526 IFT140Q96RY7 1462 aa25.21■■□□□ 1.63
CDKN1A-204ENST00000448526 SETD5Q9C0A6 1442 aa25.17■■□□□ 1.62
CDKN1A-204ENST00000448526 IQGAP2Q13576 1575 aa25.17■■□□□ 1.62
CDKN1A-204ENST00000448526 MTUS2Q5JR59 1369 aa25.14■■□□□ 1.62
CDKN1A-204ENST00000448526 THOC2Q8NI27 1593 aaKnown RBP25.14■■□□□ 1.62
CDKN1A-204ENST00000448526 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.11■■□□□ 1.61
CDKN1A-204ENST00000448526 FGD6Q6ZV73 1430 aa25.11■■□□□ 1.61
CDKN1A-204ENST00000448526 MAPKBP1O60336 1514 aa25.11■■□□□ 1.61
CDKN1A-204ENST00000448526 ERCC6Q03468 1493 aa25.07■■□□□ 1.6
CDKN1A-204ENST00000448526 EIF4G3O43432 1585 aaKnown RBP25.06■■□□□ 1.6
CDKN1A-204ENST00000448526 NCOA2Q15596 1464 aa25.06■■□□□ 1.6
CDKN1A-204ENST00000448526 MAGI3Q5TCQ9 1506 aa25.05■■□□□ 1.6
CDKN1A-204ENST00000448526 EHBP1L1Q8N3D4 1523 aa25.04■■□□□ 1.6
CDKN1A-204ENST00000448526 UGGT2Q9NYU1 1516 aa25.03■■□□□ 1.6
CDKN1A-204ENST00000448526 SUPT6HQ7KZ85 1726 aaKnown RBP25.03■■□□□ 1.6
CDKN1A-204ENST00000448526 CCDC18Q5T9S5 1454 aa25■■□□□ 1.59
CDKN1A-204ENST00000448526 HECW1Q76N89 1606 aa25■■□□□ 1.59
CDKN1A-204ENST00000448526 MYOM3Q5VTT5 1437 aa25■■□□□ 1.59
CDKN1A-204ENST00000448526 PTPRKQ15262 1439 aa24.98■■□□□ 1.59
CDKN1A-204ENST00000448526 ARHGEF11O15085 1522 aa24.98■■□□□ 1.59
CDKN1A-204ENST00000448526 KIAA0586Q9BVV6 1533 aa24.97■■□□□ 1.59
CDKN1A-204ENST00000448526 GRIN2AQ12879 1464 aa24.97■■□□□ 1.59
CDKN1A-204ENST00000448526 EPRSP07814 1512 aaKnown RBP24.96■■□□□ 1.59
CDKN1A-204ENST00000448526 SCAF1Q9H7N4 1312 aaKnown RBP24.96■■□□□ 1.59
CDKN1A-204ENST00000448526 MIER1Q8N108 512 aa24.94■■□□□ 1.58
CDKN1A-204ENST00000448526 CDK13Q14004 1512 aaKnown RBP24.94■■□□□ 1.58
CDKN1A-204ENST00000448526 DISP1Q96F81 1524 aa24.94■■□□□ 1.58
CDKN1A-204ENST00000448526 KIAA0556O60303 1618 aa24.92■■□□□ 1.58
CDKN1A-204ENST00000448526 NEUROD1Q13562 356 aa24.91■■□□□ 1.58
CDKN1A-204ENST00000448526 PTPN23Q9H3S7 1636 aa24.9■■□□□ 1.58
CDKN1A-204ENST00000448526 ACIN1Q9UKV3 1341 aaKnown RBP24.9■■□□□ 1.58
CDKN1A-204ENST00000448526 SIN3AQ96ST3 1273 aa24.88■■□□□ 1.57
CDKN1A-204ENST00000448526 MAGI1Q96QZ7 1491 aaPredicted RBP24.88■■□□□ 1.57
CDKN1A-204ENST00000448526 ARID3CA6NKF2 412 aa24.87■■□□□ 1.57
CDKN1A-204ENST00000448526 HFM1A2PYH4 1435 aa24.86■■□□□ 1.57
CDKN1A-204ENST00000448526 CEP170Q5SW79 1584 aa24.84■■□□□ 1.57
CDKN1A-204ENST00000448526 SYNJ2O15056 1496 aa24.83■■□□□ 1.57
CDKN1A-204ENST00000448526 TCOF1Q13428 1488 aaKnown RBP24.82■■□□□ 1.56
CDKN1A-204ENST00000448526 NAIPQ13075 1403 aa24.81■■□□□ 1.56
CDKN1A-204ENST00000448526 CHMP7Q8WUX9 453 aaPredicted RBP24.81■■□□□ 1.56
CDKN1A-204ENST00000448526 NUP153P49790 1475 aaKnown RBP24.79■■□□□ 1.56
CDKN1A-204ENST00000448526 CENPBP07199 599 aaPredicted RBP24.78■■□□□ 1.56
CDKN1A-204ENST00000448526 RAPGEF6Q8TEU7 1601 aa24.77■■□□□ 1.56
CDKN1A-204ENST00000448526 FBLN2P98095 1184 aa24.75■■□□□ 1.55
CDKN1A-204ENST00000448526 UACAQ9BZF9 1416 aa24.74■■□□□ 1.55
CDKN1A-204ENST00000448526 MIA2Q96PC5 1412 aa24.72■■□□□ 1.55
CDKN1A-204ENST00000448526 NUP160Q12769 1436 aa24.72■■□□□ 1.55
CDKN1A-204ENST00000448526 YTHDC1Q96MU7 727 aaKnown RBP24.71■■□□□ 1.55
CDKN1A-204ENST00000448526 CHIC2Q9UKJ5 165 aa24.7■■□□□ 1.54
CDKN1A-204ENST00000448526 RRP7BPQ9NSQ0 103 aa24.68■■□□□ 1.54
CDKN1A-204ENST00000448526 TIMELESSQ9UNS1 1208 aa24.68■■□□□ 1.54
CDKN1A-204ENST00000448526 GCC2Q8IWJ2 1684 aa24.67■■□□□ 1.54
CDKN1A-204ENST00000448526 PLB1Q6P1J6 1458 aa24.66■■□□□ 1.54
CDKN1A-204ENST00000448526 JPH4Q96JJ6 628 aa24.65■■□□□ 1.54
CDKN1A-204ENST00000448526 KDM6BO15054 1643 aa24.64■■□□□ 1.53
CDKN1A-204ENST00000448526 PPP1R15AO75807 674 aaPredicted RBP24.62■■□□□ 1.53
CDKN1A-204ENST00000448526 AKNAQ7Z591 1439 aa24.61■■□□□ 1.53
CDKN1A-204ENST00000448526 PRG4Q92954 1404 aaPredicted RBP24.6■■□□□ 1.53
CDKN1A-204ENST00000448526 CARMIL2Q6F5E8 1435 aa24.59■■□□□ 1.53
CDKN1A-204ENST00000448526 CDK11AQ9UQ88 783 aaPredicted RBP24.58■■□□□ 1.53
CDKN1A-204ENST00000448526 ZNF644Q9H582 1327 aaPredicted RBP24.57■■□□□ 1.52
CDKN1A-204ENST00000448526 TROQ12816 1431 aaPredicted RBP24.57■■□□□ 1.52
CDKN1A-204ENST00000448526 GTF3C3Q9Y5Q9 886 aa24.56■■□□□ 1.52
CDKN1A-204ENST00000448526 DENND4BO75064 1496 aaPredicted RBP24.56■■□□□ 1.52
CDKN1A-204ENST00000448526 DAPK1P53355 1430 aa24.56■■□□□ 1.52
CDKN1A-204ENST00000448526 DNMT1P26358 1616 aaKnown RBP24.54■■□□□ 1.52
CDKN1A-204ENST00000448526 TONSLQ96HA7 1378 aa24.54■■□□□ 1.52
CDKN1A-204ENST00000448526 ABCC5O15440 1437 aa24.53■■□□□ 1.52
CDKN1A-204ENST00000448526 KIF14Q15058 1648 aa24.52■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms