RNA–Protein interactions for RNA: ENST00000448520.5

PDLIM2-213, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-213ENST00000448520 NPM1P06748 294 aaKnown RBP eCLIP23.81■■□□□ 1.4
PDLIM2-213ENST00000448520 RUSC2Q8N2Y8 1516 aa23.79■■□□□ 1.4
PDLIM2-213ENST00000448520 KIAA0586Q9BVV6 1533 aa23.79■■□□□ 1.4
PDLIM2-213ENST00000448520 AEBP2Q6ZN18 517 aaPredicted RBP23.76■■□□□ 1.39
PDLIM2-213ENST00000448520 CUL7Q14999 1698 aa23.75■■□□□ 1.39
PDLIM2-213ENST00000448520 CARMIL1Q5VZK9 1371 aa23.72■■□□□ 1.39
PDLIM2-213ENST00000448520 FAM69CQ0P6D2 419 aa23.68■■□□□ 1.38
PDLIM2-213ENST00000448520 KIF13AQ9H1H9 1805 aa23.67■■□□□ 1.38
PDLIM2-213ENST00000448520 ABCC10Q5T3U5 1492 aa23.64■■□□□ 1.38
PDLIM2-213ENST00000448520 MAPKBP1O60336 1514 aa23.63■■□□□ 1.37
PDLIM2-213ENST00000448520 PTPRGP23470 1445 aa23.6■■□□□ 1.37
PDLIM2-213ENST00000448520 ADCY10Q96PN6 1610 aa23.6■■□□□ 1.37
PDLIM2-213ENST00000448520 CARMIL2Q6F5E8 1435 aa23.59■■□□□ 1.37
PDLIM2-213ENST00000448520 TNIKQ9UKE5 1360 aa23.55■■□□□ 1.36
PDLIM2-213ENST00000448520 TTBK1Q5TCY1 1321 aaPredicted RBP23.51■■□□□ 1.35
PDLIM2-213ENST00000448520 DIP2BQ9P265 1576 aa23.5■■□□□ 1.35
PDLIM2-213ENST00000448520 IQGAP2Q13576 1575 aa23.48■■□□□ 1.35
PDLIM2-213ENST00000448520 RAPGEF2Q9Y4G8 1499 aa23.46■■□□□ 1.35
PDLIM2-213ENST00000448520 ABCC2Q92887 1545 aa23.43■■□□□ 1.34
PDLIM2-213ENST00000448520 UHRF1BP1LA0JNW5 1464 aa23.41■■□□□ 1.34
PDLIM2-213ENST00000448520 UACAQ9BZF9 1416 aa23.41■■□□□ 1.34
PDLIM2-213ENST00000448520 PLB1Q6P1J6 1458 aa23.39■■□□□ 1.34
PDLIM2-213ENST00000448520 DISP1Q96F81 1524 aa23.38■■□□□ 1.33
PDLIM2-213ENST00000448520 TSPOAP1O95153 1857 aa23.37■■□□□ 1.33
PDLIM2-213ENST00000448520 UGGT2Q9NYU1 1516 aa23.37■■□□□ 1.33
PDLIM2-213ENST00000448520 ASXL2Q76L83 1435 aa23.36■■□□□ 1.33
PDLIM2-213ENST00000448520 KDM6BO15054 1643 aa23.33■■□□□ 1.33
PDLIM2-213ENST00000448520 GLI2P10070 1586 aa23.3■■□□□ 1.32
PDLIM2-213ENST00000448520 KDM5BQ9UGL1 1544 aa23.28■■□□□ 1.32
PDLIM2-213ENST00000448520 KIAA0556O60303 1618 aa23.25■■□□□ 1.31
PDLIM2-213ENST00000448520 GOLGA3Q08378 1498 aa23.23■■□□□ 1.31
PDLIM2-213ENST00000448520 EPRSP07814 1512 aaKnown RBP23.21■■□□□ 1.31
PDLIM2-213ENST00000448520 KDM4FA0A1W2PPD8 638 aa23.2■■□□□ 1.3
PDLIM2-213ENST00000448520 PRXQ9BXM0 1461 aa23.19■■□□□ 1.3
PDLIM2-213ENST00000448520 FAM9AQ8IZU1 332 aaPredicted RBP23.19■■□□□ 1.3
PDLIM2-213ENST00000448520 CTTNBP2Q8WZ74 1663 aa23.19■■□□□ 1.3
PDLIM2-213ENST00000448520 ZCCHC11Q5TAX3 1644 aaKnown RBP23.17■■□□□ 1.3
PDLIM2-213ENST00000448520 PPRC1Q5VV67 1664 aaKnown RBP23.16■■□□□ 1.3
PDLIM2-213ENST00000448520 TEX14Q8IWB6 1497 aa23.14■■□□□ 1.29
PDLIM2-213ENST00000448520 MAP3K4Q9Y6R4 1608 aa23.12■■□□□ 1.29
PDLIM2-213ENST00000448520 WDR7Q9Y4E6 1490 aa23.11■■□□□ 1.29
PDLIM2-213ENST00000448520 CSRNP3Q8WYN3 585 aa23.09■■□□□ 1.29
PDLIM2-213ENST00000448520 ABCA8O94911 1581 aa23.07■■□□□ 1.28
PDLIM2-213ENST00000448520 COL17A1Q9UMD9 1497 aaPredicted RBP23.07■■□□□ 1.28
PDLIM2-213ENST00000448520 KCNH8Q96L42 1107 aa23.07■■□□□ 1.28
PDLIM2-213ENST00000448520 CD109Q6YHK3 1445 aa23.03■■□□□ 1.28
PDLIM2-213ENST00000448520 MAGI3Q5TCQ9 1506 aa23■■□□□ 1.27
PDLIM2-213ENST00000448520 P3H3Q8IVL6 736 aa23■■□□□ 1.27
PDLIM2-213ENST00000448520 CFAP43Q8NDM7 1665 aa22.97■■□□□ 1.27
PDLIM2-213ENST00000448520 EEA1Q15075 1411 aa22.95■■□□□ 1.26
PDLIM2-213ENST00000448520 ATP10BO94823 1461 aa22.93■■□□□ 1.26
PDLIM2-213ENST00000448520 ADGRL1O94910 1474 aa22.93■■□□□ 1.26
PDLIM2-213ENST00000448520 CHIC1Q5VXU3 224 aa22.93■■□□□ 1.26
PDLIM2-213ENST00000448520 ARID3CA6NKF2 412 aa22.9■■□□□ 1.26
PDLIM2-213ENST00000448520 PHLDB1Q86UU1 1377 aa22.87■■□□□ 1.25
PDLIM2-213ENST00000448520 SAMD9Q5K651 1589 aa22.86■■□□□ 1.25
PDLIM2-213ENST00000448520 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.85■■□□□ 1.25
PDLIM2-213ENST00000448520 HNRNPUL2Q1KMD3 747 aaKnown RBP22.85■■□□□ 1.25
PDLIM2-213ENST00000448520 ARAP3Q8WWN8 1544 aa22.82■■□□□ 1.24
PDLIM2-213ENST00000448520 RAPGEF6Q8TEU7 1601 aa22.81■■□□□ 1.24
PDLIM2-213ENST00000448520 RANGAP1P46060 587 aaPredicted RBP22.8■■□□□ 1.24
PDLIM2-213ENST00000448520 ABCA9Q8IUA7 1624 aa22.78■■□□□ 1.24
PDLIM2-213ENST00000448520 PLEKHD1A6NEE1 506 aa22.77■■□□□ 1.24
PDLIM2-213ENST00000448520 FHOD3Q2V2M9 1422 aa22.73■■□□□ 1.23
PDLIM2-213ENST00000448520 NUP153P49790 1475 aaKnown RBP22.73■■□□□ 1.23
PDLIM2-213ENST00000448520 NEO1Q92859 1461 aa22.73■■□□□ 1.23
PDLIM2-213ENST00000448520 RAPGEF3O95398 923 aa22.69■■□□□ 1.22
PDLIM2-213ENST00000448520 KIF21BO75037 1637 aa22.68■■□□□ 1.22
PDLIM2-213ENST00000448520 EFCAB5A4FU69 1503 aa22.67■■□□□ 1.22
PDLIM2-213ENST00000448520 UBTFP17480 764 aaKnown RBP22.64■■□□□ 1.21
PDLIM2-213ENST00000448520 HECW2Q9P2P5 1572 aa22.61■■□□□ 1.21
PDLIM2-213ENST00000448520 AKNAQ7Z591 1439 aa22.57■■□□□ 1.2
PDLIM2-213ENST00000448520 DENND4BO75064 1496 aaPredicted RBP22.56■■□□□ 1.2
PDLIM2-213ENST00000448520 ARID4BQ4LE39 1312 aaPredicted RBP22.56■■□□□ 1.2
PDLIM2-213ENST00000448520 ILDR1Q86SU0 546 aaPredicted RBP22.54■■□□□ 1.2
PDLIM2-213ENST00000448520 FANCAO15360 1455 aa22.54■■□□□ 1.2
PDLIM2-213ENST00000448520 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.53■■□□□ 1.2
PDLIM2-213ENST00000448520 CDK11AQ9UQ88 783 aaPredicted RBP22.53■■□□□ 1.2
PDLIM2-213ENST00000448520 FMN1Q68DA7 1419 aa22.53■■□□□ 1.2
PDLIM2-213ENST00000448520 EHMT2Q96KQ7 1210 aa22.52■■□□□ 1.2
PDLIM2-213ENST00000448520 ATP1B4Q9UN42 357 aaPredicted RBP22.52■■□□□ 1.2
PDLIM2-213ENST00000448520 ADAMTSL3P82987 1691 aa22.52■■□□□ 1.2
PDLIM2-213ENST00000448520 FRMPD1Q5SYB0 1578 aa22.51■■□□□ 1.19
PDLIM2-213ENST00000448520 CFAP74Q9C0B2 1584 aa22.51■■□□□ 1.19
PDLIM2-213ENST00000448520 PTPRMP28827 1452 aa22.5■■□□□ 1.19
PDLIM2-213ENST00000448520 CDK13Q14004 1512 aaKnown RBP22.47■■□□□ 1.19
PDLIM2-213ENST00000448520 PLCH2O75038 1416 aa22.47■■□□□ 1.19
PDLIM2-213ENST00000448520 RICTORQ6R327 1708 aa22.46■■□□□ 1.19
PDLIM2-213ENST00000448520 ARHGAP35Q9NRY4 1499 aa22.46■■□□□ 1.19
PDLIM2-213ENST00000448520 BCORL1Q5H9F3 1711 aa22.45■■□□□ 1.19
PDLIM2-213ENST00000448520 EFCAB2Q5VUJ9 269 aa22.44■■□□□ 1.18
PDLIM2-213ENST00000448520 TTC37Q6PGP7 1564 aa22.44■■□□□ 1.18
PDLIM2-213ENST00000448520 MAGI2Q86UL8 1455 aa22.43■■□□□ 1.18
PDLIM2-213ENST00000448520 POGZQ7Z3K3 1410 aa22.42■■□□□ 1.18
PDLIM2-213ENST00000448520 HECW1Q76N89 1606 aa22.42■■□□□ 1.18
PDLIM2-213ENST00000448520 ARHGEF40Q8TER5 1519 aa22.41■■□□□ 1.18
PDLIM2-213ENST00000448520 SCAPERQ9BY12 1400 aa22.4■■□□□ 1.18
PDLIM2-213ENST00000448520 ZMYM4Q5VZL5 1548 aa22.4■■□□□ 1.18
PDLIM2-213ENST00000448520 MADDQ8WXG6 1647 aa22.37■■□□□ 1.17
PDLIM2-213ENST00000448520 ZFYVE16Q7Z3T8 1539 aa22.36■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms