RNA–Protein interactions for RNA: ENST00000448162.6

CCHCR1-207, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 5

Gene CCHCR1, Length 699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-207ENST00000448162 KIF13AQ9H1H9 1805 aa34.33■■■■□ 3.09
CCHCR1-207ENST00000448162 IGF1RP08069 1367 aa34.22■■■■□ 3.07
CCHCR1-207ENST00000448162 KIF27Q86VH2 1401 aa34.18■■■■□ 3.06
CCHCR1-207ENST00000448162 ABCC10Q5T3U5 1492 aa34.18■■■■□ 3.06
CCHCR1-207ENST00000448162 MAPKBP1O60336 1514 aa34.15■■■■□ 3.06
CCHCR1-207ENST00000448162 KIAA0586Q9BVV6 1533 aa34.15■■■■□ 3.06
CCHCR1-207ENST00000448162 ADCY10Q96PN6 1610 aa34.13■■■■□ 3.05
CCHCR1-207ENST00000448162 FAM69CQ0P6D2 419 aa34.13■■■■□ 3.05
CCHCR1-207ENST00000448162 NPM1P06748 294 aaKnown RBP eCLIP34.07■■■■□ 3.04
CCHCR1-207ENST00000448162 DIP2BQ9P265 1576 aa34.06■■■■□ 3.04
CCHCR1-207ENST00000448162 CUL7Q14999 1698 aa34.03■■■■□ 3.04
CCHCR1-207ENST00000448162 CARMIL1Q5VZK9 1371 aa33.91■■■■□ 3.02
CCHCR1-207ENST00000448162 PTPRGP23470 1445 aa33.87■■■■□ 3.01
CCHCR1-207ENST00000448162 KDM6BO15054 1643 aa33.79■■■■□ 3
CCHCR1-207ENST00000448162 TNIKQ9UKE5 1360 aa33.79■■■■□ 3
CCHCR1-207ENST00000448162 ABCC2Q92887 1545 aa33.77■■■■□ 3
CCHCR1-207ENST00000448162 CARMIL2Q6F5E8 1435 aa33.75■■■□□ 2.99
CCHCR1-207ENST00000448162 KDM4FA0A1W2PPD8 638 aa33.74■■■□□ 2.99
CCHCR1-207ENST00000448162 TSPOAP1O95153 1857 aa33.73■■■□□ 2.99
CCHCR1-207ENST00000448162 TTBK1Q5TCY1 1321 aaPredicted RBP33.73■■■□□ 2.99
CCHCR1-207ENST00000448162 IQGAP2Q13576 1575 aa33.72■■■□□ 2.99
CCHCR1-207ENST00000448162 UHRF1BP1LA0JNW5 1464 aa33.69■■■□□ 2.98
CCHCR1-207ENST00000448162 DISP1Q96F81 1524 aa33.69■■■□□ 2.98
CCHCR1-207ENST00000448162 ASXL2Q76L83 1435 aa33.68■■■□□ 2.98
CCHCR1-207ENST00000448162 RAPGEF2Q9Y4G8 1499 aa33.66■■■□□ 2.98
CCHCR1-207ENST00000448162 PLB1Q6P1J6 1458 aa33.63■■■□□ 2.97
CCHCR1-207ENST00000448162 GLI2P10070 1586 aa33.63■■■□□ 2.97
CCHCR1-207ENST00000448162 UACAQ9BZF9 1416 aa33.62■■■□□ 2.97
CCHCR1-207ENST00000448162 PPRC1Q5VV67 1664 aaKnown RBP33.61■■■□□ 2.97
CCHCR1-207ENST00000448162 PRXQ9BXM0 1461 aa33.6■■■□□ 2.97
CCHCR1-207ENST00000448162 CHIC1Q5VXU3 224 aa33.59■■■□□ 2.97
CCHCR1-207ENST00000448162 UGGT2Q9NYU1 1516 aa33.56■■■□□ 2.96
CCHCR1-207ENST00000448162 KDM5BQ9UGL1 1544 aa33.54■■■□□ 2.96
CCHCR1-207ENST00000448162 COL17A1Q9UMD9 1497 aaPredicted RBP33.49■■■□□ 2.95
CCHCR1-207ENST00000448162 EPRSP07814 1512 aaKnown RBP33.48■■■□□ 2.95
CCHCR1-207ENST00000448162 EEA1Q15075 1411 aa33.47■■■□□ 2.95
CCHCR1-207ENST00000448162 CSRNP3Q8WYN3 585 aa33.45■■■□□ 2.95
CCHCR1-207ENST00000448162 KIAA0556O60303 1618 aa33.45■■■□□ 2.95
CCHCR1-207ENST00000448162 MAP3K4Q9Y6R4 1608 aa33.42■■■□□ 2.94
CCHCR1-207ENST00000448162 ZCCHC11Q5TAX3 1644 aaKnown RBP33.4■■■□□ 2.94
CCHCR1-207ENST00000448162 CTTNBP2Q8WZ74 1663 aa33.33■■■□□ 2.93
CCHCR1-207ENST00000448162 ADGRL1O94910 1474 aa33.31■■■□□ 2.92
CCHCR1-207ENST00000448162 TEX14Q8IWB6 1497 aa33.29■■■□□ 2.92
CCHCR1-207ENST00000448162 WDR7Q9Y4E6 1490 aa33.28■■■□□ 2.92
CCHCR1-207ENST00000448162 ABCA8O94911 1581 aa33.2■■■□□ 2.91
CCHCR1-207ENST00000448162 FAM9AQ8IZU1 332 aaPredicted RBP33.18■■■□□ 2.9
CCHCR1-207ENST00000448162 GOLGA3Q08378 1498 aa33.18■■■□□ 2.9
CCHCR1-207ENST00000448162 KIF21BO75037 1637 aa33.17■■■□□ 2.9
CCHCR1-207ENST00000448162 MAGI3Q5TCQ9 1506 aa33.13■■■□□ 2.89
CCHCR1-207ENST00000448162 CD109Q6YHK3 1445 aa33.11■■■□□ 2.89
CCHCR1-207ENST00000448162 KCNH8Q96L42 1107 aa33.07■■■□□ 2.88
CCHCR1-207ENST00000448162 CFAP43Q8NDM7 1665 aa33.06■■■□□ 2.88
CCHCR1-207ENST00000448162 ILDR1Q86SU0 546 aaPredicted RBP32.99■■■□□ 2.87
CCHCR1-207ENST00000448162 SAMD9Q5K651 1589 aa32.97■■■□□ 2.87
CCHCR1-207ENST00000448162 HECW2Q9P2P5 1572 aa32.95■■■□□ 2.86
CCHCR1-207ENST00000448162 ATP10BO94823 1461 aa32.94■■■□□ 2.86
CCHCR1-207ENST00000448162 ARAP3Q8WWN8 1544 aa32.89■■■□□ 2.86
CCHCR1-207ENST00000448162 P3H3Q8IVL6 736 aa32.89■■■□□ 2.86
CCHCR1-207ENST00000448162 ARID3CA6NKF2 412 aa32.88■■■□□ 2.85
CCHCR1-207ENST00000448162 ABCA9Q8IUA7 1624 aa32.8■■■□□ 2.84
CCHCR1-207ENST00000448162 EFCAB5A4FU69 1503 aa32.75■■■□□ 2.83
CCHCR1-207ENST00000448162 PHLDB1Q86UU1 1377 aa32.74■■■□□ 2.83
CCHCR1-207ENST00000448162 UBTFP17480 764 aaKnown RBP32.73■■■□□ 2.83
CCHCR1-207ENST00000448162 RAPGEF6Q8TEU7 1601 aa32.71■■■□□ 2.83
CCHCR1-207ENST00000448162 EHMT2Q96KQ7 1210 aa32.69■■■□□ 2.82
CCHCR1-207ENST00000448162 FHOD3Q2V2M9 1422 aa32.68■■■□□ 2.82
CCHCR1-207ENST00000448162 RAPGEF3O95398 923 aa32.68■■■□□ 2.82
CCHCR1-207ENST00000448162 NUP153P49790 1475 aaKnown RBP32.67■■■□□ 2.82
CCHCR1-207ENST00000448162 NEO1Q92859 1461 aa32.67■■■□□ 2.82
CCHCR1-207ENST00000448162 RANGAP1P46060 587 aaPredicted RBP32.65■■■□□ 2.82
CCHCR1-207ENST00000448162 ADAMTSL3P82987 1691 aa32.61■■■□□ 2.81
CCHCR1-207ENST00000448162 FRMPD1Q5SYB0 1578 aa32.61■■■□□ 2.81
CCHCR1-207ENST00000448162 ARHGAP35Q9NRY4 1499 aa32.61■■■□□ 2.81
CCHCR1-207ENST00000448162 PTPRMP28827 1452 aa32.58■■■□□ 2.81
CCHCR1-207ENST00000448162 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP32.57■■■□□ 2.8
CCHCR1-207ENST00000448162 HNRNPUL2Q1KMD3 747 aaKnown RBP32.57■■■□□ 2.8
CCHCR1-207ENST00000448162 BCORL1Q5H9F3 1711 aa32.47■■■□□ 2.79
CCHCR1-207ENST00000448162 PLEKHD1A6NEE1 506 aa32.45■■■□□ 2.79
CCHCR1-207ENST00000448162 FMN1Q68DA7 1419 aa32.42■■■□□ 2.78
CCHCR1-207ENST00000448162 AKNAQ7Z591 1439 aa32.42■■■□□ 2.78
CCHCR1-207ENST00000448162 DENND4BO75064 1496 aaPredicted RBP32.42■■■□□ 2.78
CCHCR1-207ENST00000448162 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP32.41■■■□□ 2.781e-5■■■■□ 25.8
CCHCR1-207ENST00000448162 MADDQ8WXG6 1647 aa32.41■■■□□ 2.78
CCHCR1-207ENST00000448162 RICTORQ6R327 1708 aa32.4■■■□□ 2.78
CCHCR1-207ENST00000448162 ARHGEF40Q8TER5 1519 aa32.4■■■□□ 2.78
CCHCR1-207ENST00000448162 FANCAO15360 1455 aa32.38■■■□□ 2.77
CCHCR1-207ENST00000448162 ARID4BQ4LE39 1312 aaPredicted RBP32.38■■■□□ 2.77
CCHCR1-207ENST00000448162 TTC37Q6PGP7 1564 aa32.36■■■□□ 2.77
CCHCR1-207ENST00000448162 LMTK3Q96Q04 1460 aa32.33■■■□□ 2.77
CCHCR1-207ENST00000448162 PCF11O94913 1555 aaKnown RBP32.32■■■□□ 2.76
CCHCR1-207ENST00000448162 ZMYM4Q5VZL5 1548 aa32.31■■■□□ 2.76
CCHCR1-207ENST00000448162 CLIP1P30622 1438 aa32.3■■■□□ 2.76
CCHCR1-207ENST00000448162 FBXO41Q8TF61 875 aa32.29■■■□□ 2.76
CCHCR1-207ENST00000448162 CDK13Q14004 1512 aaKnown RBP32.29■■■□□ 2.76
CCHCR1-207ENST00000448162 CFAP74Q9C0B2 1584 aa32.28■■■□□ 2.76
CCHCR1-207ENST00000448162 YEATS2Q9ULM3 1422 aa32.27■■■□□ 2.76
CCHCR1-207ENST00000448162 SIGLEC1Q9BZZ2 1709 aa32.27■■■□□ 2.76
CCHCR1-207ENST00000448162 HECW1Q76N89 1606 aa32.26■■■□□ 2.76
CCHCR1-207ENST00000448162 RIMS1Q86UR5 1692 aaKnown RBP32.24■■■□□ 2.75
CCHCR1-207ENST00000448162 PLCH2O75038 1416 aa32.22■■■□□ 2.75
Retrieved 100 of 20,778 RNA–protein pairs in 133.1 ms