RNA–Protein interactions for RNA: ENST00000448141.6

CCHCR1-206, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 664 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-206ENST00000448141 CYB5RLQ6IPT4 315 aa34.48■■■■□ 3.11
CCHCR1-206ENST00000448141 ERCC6L2Q5T890 1561 aa34.48■■■■□ 3.11
CCHCR1-206ENST00000448141 KIAA0586Q9BVV6 1533 aa34.47■■■■□ 3.11
CCHCR1-206ENST00000448141 JPH4Q96JJ6 628 aa34.42■■■■□ 3.1
CCHCR1-206ENST00000448141 EEA1Q15075 1411 aa34.4■■■■□ 3.1
CCHCR1-206ENST00000448141 PRXQ9BXM0 1461 aa34.39■■■■□ 3.1
CCHCR1-206ENST00000448141 PRG4Q92954 1404 aaPredicted RBP34.38■■■■□ 3.09
CCHCR1-206ENST00000448141 CSRNP3Q8WYN3 585 aa34.37■■■■□ 3.09
CCHCR1-206ENST00000448141 IQGAP2Q13576 1575 aa34.33■■■■□ 3.09
CCHCR1-206ENST00000448141 FAM9AQ8IZU1 332 aaPredicted RBP34.33■■■■□ 3.09
CCHCR1-206ENST00000448141 CTTNBP2Q8WZ74 1663 aa34.28■■■■□ 3.08
CCHCR1-206ENST00000448141 UGGT2Q9NYU1 1516 aa34.11■■■■□ 3.05
CCHCR1-206ENST00000448141 KIF21BO75037 1637 aa34.11■■■■□ 3.05
CCHCR1-206ENST00000448141 CARMIL2Q6F5E8 1435 aa34.1■■■■□ 3.05
CCHCR1-206ENST00000448141 DISP1Q96F81 1524 aa34.07■■■■□ 3.04
CCHCR1-206ENST00000448141 KIAA0556O60303 1618 aa34.01■■■■□ 3.03
CCHCR1-206ENST00000448141 TNIKQ9UKE5 1360 aa33.98■■■■□ 3.03
CCHCR1-206ENST00000448141 PTPRGP23470 1445 aa33.96■■■■□ 3.03
CCHCR1-206ENST00000448141 TTBK1Q5TCY1 1321 aaPredicted RBP33.96■■■■□ 3.03
CCHCR1-206ENST00000448141 GOLGA3Q08378 1498 aa33.92■■■■□ 3.02
CCHCR1-206ENST00000448141 EHMT2Q96KQ7 1210 aa33.91■■■■□ 3.02
CCHCR1-206ENST00000448141 ADCY10Q96PN6 1610 aa33.9■■■■□ 3.02
CCHCR1-206ENST00000448141 UBTFP17480 764 aaKnown RBP33.79■■■■□ 3
CCHCR1-206ENST00000448141 SAMD9Q5K651 1589 aa33.79■■■■□ 3
CCHCR1-206ENST00000448141 TRHP20396 242 aaPredicted RBP33.78■■■■□ 3
CCHCR1-206ENST00000448141 RANGAP1P46060 587 aaPredicted RBP33.77■■■■□ 3
CCHCR1-206ENST00000448141 UACAQ9BZF9 1416 aa33.74■■■□□ 2.99
CCHCR1-206ENST00000448141 P3H3Q8IVL6 736 aa33.74■■■□□ 2.99
CCHCR1-206ENST00000448141 NPM1P06748 294 aaKnown RBP eCLIP33.73■■■□□ 2.99
CCHCR1-206ENST00000448141 UHRF1BP1LA0JNW5 1464 aa33.7■■■□□ 2.99
CCHCR1-206ENST00000448141 ABCC2Q92887 1545 aa33.7■■■□□ 2.99
CCHCR1-206ENST00000448141 PLB1Q6P1J6 1458 aa33.65■■■□□ 2.98
CCHCR1-206ENST00000448141 MAPKBP1O60336 1514 aa33.64■■■□□ 2.98
CCHCR1-206ENST00000448141 EFCAB5A4FU69 1503 aa33.63■■■□□ 2.97
CCHCR1-206ENST00000448141 ABCA8O94911 1581 aa33.61■■■□□ 2.97
CCHCR1-206ENST00000448141 FHOD3Q2V2M9 1422 aa33.58■■■□□ 2.97
CCHCR1-206ENST00000448141 KDM5BQ9UGL1 1544 aa33.55■■■□□ 2.96
CCHCR1-206ENST00000448141 ZCCHC11Q5TAX3 1644 aaKnown RBP33.55■■■□□ 2.96
CCHCR1-206ENST00000448141 KIF13AQ9H1H9 1805 aa33.54■■■□□ 2.96
CCHCR1-206ENST00000448141 RAPGEF6Q8TEU7 1601 aa33.46■■■□□ 2.95
CCHCR1-206ENST00000448141 ASXL2Q76L83 1435 aa33.46■■■□□ 2.95
CCHCR1-206ENST00000448141 ABCC10Q5T3U5 1492 aa33.46■■■□□ 2.95
CCHCR1-206ENST00000448141 ARHGAP35Q9NRY4 1499 aa33.46■■■□□ 2.95
CCHCR1-206ENST00000448141 DIP2BQ9P265 1576 aa33.46■■■□□ 2.95
CCHCR1-206ENST00000448141 FAM69CQ0P6D2 419 aa33.39■■■□□ 2.94
CCHCR1-206ENST00000448141 ARID3CA6NKF2 412 aa33.36■■■□□ 2.93
CCHCR1-206ENST00000448141 ATP10BO94823 1461 aa33.32■■■□□ 2.92
CCHCR1-206ENST00000448141 NUP153P49790 1475 aaKnown RBP33.31■■■□□ 2.92
CCHCR1-206ENST00000448141 WDR7Q9Y4E6 1490 aa33.3■■■□□ 2.92
CCHCR1-206ENST00000448141 FMN1Q68DA7 1419 aa33.29■■■□□ 2.92
CCHCR1-206ENST00000448141 CLIP1P30622 1438 aa33.28■■■□□ 2.92
CCHCR1-206ENST00000448141 EPRSP07814 1512 aaKnown RBP33.26■■■□□ 2.91
CCHCR1-206ENST00000448141 GLI2P10070 1586 aa33.25■■■□□ 2.91
CCHCR1-206ENST00000448141 TSPOAP1O95153 1857 aa33.24■■■□□ 2.91
CCHCR1-206ENST00000448141 LOC105371045A0A1W2PR82 267 aa33.23■■■□□ 2.91
CCHCR1-206ENST00000448141 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.19■■■□□ 2.9
CCHCR1-206ENST00000448141 HNRNPUL2Q1KMD3 747 aaKnown RBP33.19■■■□□ 2.9
CCHCR1-206ENST00000448141 HECW1Q76N89 1606 aa33.18■■■□□ 2.9
CCHCR1-206ENST00000448141 KCNH8Q96L42 1107 aa33.15■■■□□ 2.9
CCHCR1-206ENST00000448141 MAP3K4Q9Y6R4 1608 aa33.14■■■□□ 2.9
CCHCR1-206ENST00000448141 CEP162Q5TB80 1403 aa33.14■■■□□ 2.9
CCHCR1-206ENST00000448141 ATP1B4Q9UN42 357 aaPredicted RBP33.14■■■□□ 2.9
CCHCR1-206ENST00000448141 CDK13Q14004 1512 aaKnown RBP33.12■■■□□ 2.89
CCHCR1-206ENST00000448141 PCF11O94913 1555 aaKnown RBP33.1■■■□□ 2.89
CCHCR1-206ENST00000448141 PPRC1Q5VV67 1664 aaKnown RBP33.1■■■□□ 2.89
CCHCR1-206ENST00000448141 LRRIQ1Q96JM4 1722 aa33.07■■■□□ 2.88
CCHCR1-206ENST00000448141 CFAP43Q8NDM7 1665 aa33.06■■■□□ 2.88
CCHCR1-206ENST00000448141 CASKIN1Q8WXD9 1431 aa33.04■■■□□ 2.88
CCHCR1-206ENST00000448141 PLEKHD1A6NEE1 506 aa33.02■■■□□ 2.88
CCHCR1-206ENST00000448141 FYCO1Q9BQS8 1478 aa32.99■■■□□ 2.87
CCHCR1-206ENST00000448141 ABCA9Q8IUA7 1624 aa32.98■■■□□ 2.87
CCHCR1-206ENST00000448141 CD109Q6YHK3 1445 aa32.97■■■□□ 2.87
CCHCR1-206ENST00000448141 TEX14Q8IWB6 1497 aa32.93■■■□□ 2.86
CCHCR1-206ENST00000448141 KDM6BO15054 1643 aa32.92■■■□□ 2.86
CCHCR1-206ENST00000448141 CCDC18Q5T9S5 1454 aa32.92■■■□□ 2.86
CCHCR1-206ENST00000448141 MAGI3Q5TCQ9 1506 aa32.9■■■□□ 2.86
CCHCR1-206ENST00000448141 CDK11AQ9UQ88 783 aaPredicted RBP32.89■■■□□ 2.86
CCHCR1-206ENST00000448141 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP32.84■■■□□ 2.851e-5■■■■□ 25.8
CCHCR1-206ENST00000448141 TTC37Q6PGP7 1564 aa32.83■■■□□ 2.85
CCHCR1-206ENST00000448141 TROQ12816 1431 aaPredicted RBP32.81■■■□□ 2.84
CCHCR1-206ENST00000448141 KIF14Q15058 1648 aa32.79■■■□□ 2.84
CCHCR1-206ENST00000448141 COL17A1Q9UMD9 1497 aaPredicted RBP32.74■■■□□ 2.83
CCHCR1-206ENST00000448141 VPS8Q8N3P4 1428 aa32.73■■■□□ 2.83
CCHCR1-206ENST00000448141 MYO5CQ9NQX4 1742 aa32.68■■■□□ 2.82
CCHCR1-206ENST00000448141 NEO1Q92859 1461 aa32.67■■■□□ 2.82
CCHCR1-206ENST00000448141 CFAP74Q9C0B2 1584 aa32.63■■■□□ 2.81
CCHCR1-206ENST00000448141 ARAP3Q8WWN8 1544 aa32.62■■■□□ 2.81
CCHCR1-206ENST00000448141 FANCAO15360 1455 aa32.62■■■□□ 2.81
CCHCR1-206ENST00000448141 PHLDB1Q86UU1 1377 aa32.62■■■□□ 2.81
CCHCR1-206ENST00000448141 PLCH2O75038 1416 aa32.61■■■□□ 2.81
CCHCR1-206ENST00000448141 MTUS2Q5JR59 1369 aa32.58■■■□□ 2.81
CCHCR1-206ENST00000448141 TIAM1Q13009 1591 aa32.56■■■□□ 2.8
CCHCR1-206ENST00000448141 AKNAQ7Z591 1439 aa32.55■■■□□ 2.8
CCHCR1-206ENST00000448141 EHBP1L1Q8N3D4 1523 aa32.54■■■□□ 2.8
CCHCR1-206ENST00000448141 CDC42BPBQ9Y5S2 1711 aa32.53■■■□□ 2.8
CCHCR1-206ENST00000448141 PREX2Q70Z35 1606 aa32.52■■■□□ 2.8
CCHCR1-206ENST00000448141 CDC42BPAQ5VT25 1732 aa32.52■■■□□ 2.8
CCHCR1-206ENST00000448141 ARHGAP5Q13017 1502 aa32.51■■■□□ 2.8
CCHCR1-206ENST00000448141 EFCAB2Q5VUJ9 269 aa32.48■■■□□ 2.79
CCHCR1-206ENST00000448141 RAPGEF3O95398 923 aa32.47■■■□□ 2.79
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms