RNA–Protein interactions for RNA: ENST00000448136.5

SNHG16-201, Transcript of small nucleolar RNA host gene 16, humanhuman

TSL 1 (best) BASIC

Gene SNHG16, Length 3,607 nt, Biotype lincRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG16-201ENST00000448136 CCDC136Q96JN2 1154 aa14.28□□□□□ -0.12
SNHG16-201ENST00000448136 RRBP1Q9P2E9 1410 aaKnown RBP14.26□□□□□ -0.13
SNHG16-201ENST00000448136 DEKP35659 375 aaKnown RBP14.26□□□□□ -0.13
SNHG16-201ENST00000448136 BAZ1BQ9UIG0 1483 aaKnown RBP14.24□□□□□ -0.13
SNHG16-201ENST00000448136 RTN4Q9NQC3 1192 aaKnown RBP14.24□□□□□ -0.13
SNHG16-201ENST00000448136 PPP6R1Q9UPN7 881 aa14.24□□□□□ -0.13
SNHG16-201ENST00000448136 KCNA4P22459 653 aa14.23□□□□□ -0.13
SNHG16-201ENST00000448136 CCNB3Q8WWL7 1395 aa14.22□□□□□ -0.13
SNHG16-201ENST00000448136 CUX2O14529 1486 aa14.21□□□□□ -0.14
SNHG16-201ENST00000448136 SENP3-EIF4A1A0A087X0R7 540 aa14.19□□□□□ -0.14
SNHG16-201ENST00000448136 SALL2Q9Y467 1007 aaPredicted RBP14.18□□□□□ -0.14
SNHG16-201ENST00000448136 CCDC184Q52MB2 194 aa14.16□□□□□ -0.14
SNHG16-201ENST00000448136 CDK11AQ9UQ88 783 aaPredicted RBP14.15□□□□□ -0.14
SNHG16-201ENST00000448136 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.14□□□□□ -0.15
SNHG16-201ENST00000448136 PRXQ9BXM0 1461 aa14.14□□□□□ -0.15
SNHG16-201ENST00000448136 CNGB1Q14028 1251 aaPredicted RBP14.14□□□□□ -0.15
SNHG16-201ENST00000448136 ARHGAP35Q9NRY4 1499 aa14.13□□□□□ -0.15
SNHG16-201ENST00000448136 HNRNPUQ00839 825 aaKnown RBP eCLIP14.12□□□□□ -0.15
SNHG16-201ENST00000448136 PAK3O75914 559 aaPredicted RBP14.11□□□□□ -0.15
SNHG16-201ENST00000448136 B4GALNT3Q6L9W6 998 aa14.11□□□□□ -0.15
SNHG16-201ENST00000448136 PHLDB1Q86UU1 1377 aa14.11□□□□□ -0.15
SNHG16-201ENST00000448136 FAM50AQ14320 339 aaKnown RBP14.08□□□□□ -0.15
SNHG16-201ENST00000448136 FANCIQ9NVI1 1328 aa14.08□□□□□ -0.16
SNHG16-201ENST00000448136 TOP2BQ02880 1626 aa14.08□□□□□ -0.16
SNHG16-201ENST00000448136 ANP32CO43423 234 aa14.08□□□□□ -0.16
SNHG16-201ENST00000448136 IL27Q8NEV9 243 aa14.08□□□□□ -0.16
SNHG16-201ENST00000448136 FOXD1Q16676 465 aa14.07□□□□□ -0.16
SNHG16-201ENST00000448136 SETD5Q9C0A6 1442 aa14.06□□□□□ -0.16
SNHG16-201ENST00000448136 BICRAQ9NZM4 1560 aa14.05□□□□□ -0.16
SNHG16-201ENST00000448136 CCER2I3L3R5 266 aa14.04□□□□□ -0.16
SNHG16-201ENST00000448136 P3H3Q8IVL6 736 aa14.04□□□□□ -0.16
SNHG16-201ENST00000448136 ERICH3Q5RHP9 1530 aa14.02□□□□□ -0.17
SNHG16-201ENST00000448136 ATAD2BQ9ULI0 1458 aa14.01□□□□□ -0.17
SNHG16-201ENST00000448136 PEG3Q9GZU2 1588 aa13.99□□□□□ -0.17
SNHG16-201ENST00000448136 ATP1B4Q9UN42 357 aaPredicted RBP13.99□□□□□ -0.17
SNHG16-201ENST00000448136 CUX1P39880 1505 aa13.98□□□□□ -0.17
SNHG16-201ENST00000448136 BIVM-ERCC5R4GMW8 1640 aa13.97□□□□□ -0.17
SNHG16-201ENST00000448136 TIAM1Q13009 1591 aa13.96□□□□□ -0.17
SNHG16-201ENST00000448136 C11orf95C9JLR9 678 aaPredicted RBP13.96□□□□□ -0.17
SNHG16-201ENST00000448136 FAM9BQ8IZU0 186 aa13.95□□□□□ -0.18
SNHG16-201ENST00000448136 WASHC2AQ641Q2 1341 aa13.95□□□□□ -0.18
SNHG16-201ENST00000448136 NOP58Q9Y2X3 529 aaKnown RBP13.95□□□□□ -0.18
SNHG16-201ENST00000448136 AQRO60306 1485 aaKnown RBP eCLIP13.94□□□□□ -0.185e-10■■■■□ 19.4
SNHG16-201ENST00000448136 LRRC9Q6ZRR7 1453 aa13.94□□□□□ -0.18
SNHG16-201ENST00000448136 NPM2Q86SE8 214 aaKnown RBP13.93□□□□□ -0.18
SNHG16-201ENST00000448136 KDM5BQ9UGL1 1544 aa13.92□□□□□ -0.18
SNHG16-201ENST00000448136 PTPRKQ15262 1439 aa13.92□□□□□ -0.18
SNHG16-201ENST00000448136 LAS1LQ9Y4W2 734 aaKnown RBP13.89□□□□□ -0.19
SNHG16-201ENST00000448136 PPP4R2Q9NY27 417 aa13.88□□□□□ -0.19
SNHG16-201ENST00000448136 EIF5BO60841 1220 aaKnown RBP13.87□□□□□ -0.19
SNHG16-201ENST00000448136 HSPA5P11021 654 aaKnown RBP13.87□□□□□ -0.19
SNHG16-201ENST00000448136 RTL5Q5HYW3 569 aaPredicted RBP13.87□□□□□ -0.19
SNHG16-201ENST00000448136 KIF27Q86VH2 1401 aa13.86□□□□□ -0.19
SNHG16-201ENST00000448136 TONSLQ96HA7 1378 aa13.85□□□□□ -0.19
SNHG16-201ENST00000448136 IGF1RP08069 1367 aa13.85□□□□□ -0.19
SNHG16-201ENST00000448136 AKNAQ7Z591 1439 aa13.84□□□□□ -0.19
SNHG16-201ENST00000448136 PCF11O94913 1555 aaKnown RBP13.84□□□□□ -0.19
SNHG16-201ENST00000448136 FHOD3Q2V2M9 1422 aa13.81□□□□□ -0.2
SNHG16-201ENST00000448136 DENND4BO75064 1496 aaPredicted RBP13.8□□□□□ -0.2
SNHG16-201ENST00000448136 ZBTB47Q9UFB7 747 aaPredicted RBP13.78□□□□□ -0.2
SNHG16-201ENST00000448136 CCDC18Q5T9S5 1454 aa13.78□□□□□ -0.2
SNHG16-201ENST00000448136 TIMELESSQ9UNS1 1208 aa13.78□□□□□ -0.2
SNHG16-201ENST00000448136 PRKRIP1Q9H875 184 aaPredicted RBP13.77□□□□□ -0.2
SNHG16-201ENST00000448136 SKAP1Q86WV1 359 aa13.77□□□□□ -0.21
SNHG16-201ENST00000448136 POLR3GLQ9BT43 218 aa13.77□□□□□ -0.21
SNHG16-201ENST00000448136 MRS2Q9HD23 443 aa13.76□□□□□ -0.21
SNHG16-201ENST00000448136 BRPF3Q9ULD4 1205 aa13.76□□□□□ -0.21
SNHG16-201ENST00000448136 ANP32AP39687 249 aaKnown RBP13.75□□□□□ -0.21
SNHG16-201ENST00000448136 CHIC2Q9UKJ5 165 aa13.75□□□□□ -0.21
SNHG16-201ENST00000448136 RRP7BPQ9NSQ0 103 aa13.75□□□□□ -0.21
SNHG16-201ENST00000448136 CFAP43Q8NDM7 1665 aa13.75□□□□□ -0.21
SNHG16-201ENST00000448136 MAP3K1Q13233 1512 aa13.74□□□□□ -0.21
SNHG16-201ENST00000448136 KDM6BO15054 1643 aa13.73□□□□□ -0.21
SNHG16-201ENST00000448136 CARMIL1Q5VZK9 1371 aa13.73□□□□□ -0.21
SNHG16-201ENST00000448136 NEFMP07197 916 aa13.73□□□□□ -0.21
SNHG16-201ENST00000448136 MYT1LQ9UL68 1186 aa13.73□□□□□ -0.21
SNHG16-201ENST00000448136 FHAD1B1AJZ9 1412 aa13.72□□□□□ -0.21
SNHG16-201ENST00000448136 NBPF8Q3BBV2 869 aa13.72□□□□□ -0.21
SNHG16-201ENST00000448136 IPO9Q96P70 1041 aaKnown RBP13.72□□□□□ -0.21
SNHG16-201ENST00000448136 PTPN23Q9H3S7 1636 aa13.72□□□□□ -0.21
SNHG16-201ENST00000448136 NAIPQ13075 1403 aa13.72□□□□□ -0.21
SNHG16-201ENST00000448136 UACAQ9BZF9 1416 aa13.7□□□□□ -0.22
SNHG16-201ENST00000448136 FGD6Q6ZV73 1430 aa13.7□□□□□ -0.22
SNHG16-201ENST00000448136 ZBED9Q6R2W3 1325 aa13.7□□□□□ -0.22
SNHG16-201ENST00000448136 L3MBTL2Q969R5 705 aa13.7□□□□□ -0.22
SNHG16-201ENST00000448136 CNTLNQ9NXG0 1405 aa13.7□□□□□ -0.22
SNHG16-201ENST00000448136 NCOA2Q15596 1464 aa13.69□□□□□ -0.22
SNHG16-201ENST00000448136 LRRIQ1Q96JM4 1722 aa13.69□□□□□ -0.22
SNHG16-201ENST00000448136 SLC4A3P48751 1232 aa13.68□□□□□ -0.22
SNHG16-201ENST00000448136 HFM1A2PYH4 1435 aa13.67□□□□□ -0.22
SNHG16-201ENST00000448136 CCDC7Q96M83 1385 aa13.66□□□□□ -0.22
SNHG16-201ENST00000448136 EIF4G2P78344 907 aaKnown RBP eCLIP13.65□□□□□ -0.22
SNHG16-201ENST00000448136 ERICH6BQ5W0A0 696 aa13.65□□□□□ -0.22
SNHG16-201ENST00000448136 KIF7Q2M1P5 1343 aa13.65□□□□□ -0.22
SNHG16-201ENST00000448136 NCOA1Q15788 1441 aa13.63□□□□□ -0.23
SNHG16-201ENST00000448136 CFTRP13569 1480 aa13.62□□□□□ -0.23
SNHG16-201ENST00000448136 NCAPD3P42695 1498 aa13.62□□□□□ -0.23
SNHG16-201ENST00000448136 SLC4A1APQ9BWU0 796 aaKnown RBP13.62□□□□□ -0.23
SNHG16-201ENST00000448136 FGD5Q6ZNL6 1462 aa13.61□□□□□ -0.23
SNHG16-201ENST00000448136 ARID3CA6NKF2 412 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms