RNA–Protein interactions for RNA: ENST00000447873.5

SGCE-207, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-207ENST00000447873 CEP170Q5SW79 1584 aa31.4■■■□□ 2.62
SGCE-207ENST00000447873 NUP160Q12769 1436 aa31.39■■■□□ 2.62
SGCE-207ENST00000447873 KIAA0586Q9BVV6 1533 aa31.34■■■□□ 2.61
SGCE-207ENST00000447873 RANGAP1P46060 587 aaPredicted RBP31.34■■■□□ 2.61
SGCE-207ENST00000447873 CEP162Q5TB80 1403 aa31.33■■■□□ 2.61
SGCE-207ENST00000447873 IQGAP2Q13576 1575 aa31.32■■■□□ 2.61
SGCE-207ENST00000447873 CLIP1P30622 1438 aa31.25■■■□□ 2.59
SGCE-207ENST00000447873 OSCARQ8IYS5 282 aa31.19■■■□□ 2.58
SGCE-207ENST00000447873 CLASP1Q7Z460 1538 aa31.16■■■□□ 2.58
SGCE-207ENST00000447873 UGGT2Q9NYU1 1516 aa31.15■■■□□ 2.58
SGCE-207ENST00000447873 JPH4Q96JJ6 628 aa31.13■■■□□ 2.57
SGCE-207ENST00000447873 EFCAB5A4FU69 1503 aa31.13■■■□□ 2.57
SGCE-207ENST00000447873 ARHGAP35Q9NRY4 1499 aa31.13■■■□□ 2.57
SGCE-207ENST00000447873 SAMD9Q5K651 1589 aa31.1■■■□□ 2.57
SGCE-207ENST00000447873 SHROOM2Q13796 1616 aa31.06■■■□□ 2.56
SGCE-207ENST00000447873 P3H3Q8IVL6 736 aa31.05■■■□□ 2.56
SGCE-207ENST00000447873 DISP1Q96F81 1524 aa31.02■■■□□ 2.56
SGCE-207ENST00000447873 ARAP1Q96P48 1450 aa31.01■■■□□ 2.56
SGCE-207ENST00000447873 KIAA0556O60303 1618 aa31■■■□□ 2.55
SGCE-207ENST00000447873 CARMIL2Q6F5E8 1435 aa31■■■□□ 2.55
SGCE-207ENST00000447873 PRG4Q92954 1404 aaPredicted RBP30.99■■■□□ 2.55
SGCE-207ENST00000447873 FHOD3Q2V2M9 1422 aa30.99■■■□□ 2.55
SGCE-207ENST00000447873 VPS8Q8N3P4 1428 aa30.89■■■□□ 2.54
SGCE-207ENST00000447873 ERCC6L2Q5T890 1561 aa30.85■■■□□ 2.53
SGCE-207ENST00000447873 FMN1Q68DA7 1419 aa30.85■■■□□ 2.53
SGCE-207ENST00000447873 TTBK1Q5TCY1 1321 aaPredicted RBP30.82■■■□□ 2.52
SGCE-207ENST00000447873 PTPRGP23470 1445 aa30.74■■■□□ 2.51
SGCE-207ENST00000447873 PCF11O94913 1555 aaKnown RBP30.72■■■□□ 2.51
SGCE-207ENST00000447873 CASKIN1Q8WXD9 1431 aa30.7■■■□□ 2.5
SGCE-207ENST00000447873 FYCO1Q9BQS8 1478 aa30.67■■■□□ 2.5
SGCE-207ENST00000447873 ATP1B4Q9UN42 357 aaPredicted RBP30.66■■■□□ 2.5
SGCE-207ENST00000447873 ARHGEF11O15085 1522 aa30.66■■■□□ 2.5
SGCE-207ENST00000447873 RAPGEF6Q8TEU7 1601 aa30.63■■■□□ 2.49
SGCE-207ENST00000447873 PLB1Q6P1J6 1458 aa30.62■■■□□ 2.49
SGCE-207ENST00000447873 APLP2Q06481 763 aa30.62■■■□□ 2.49
SGCE-207ENST00000447873 HECW1Q76N89 1606 aa30.6■■■□□ 2.49
SGCE-207ENST00000447873 ABCA8O94911 1581 aa30.58■■■□□ 2.49
SGCE-207ENST00000447873 RIMBP3CA6NJZ7 1639 aa30.57■■■□□ 2.48
SGCE-207ENST00000447873 RIMBP3BA6NNM3 1639 aa30.57■■■□□ 2.48
SGCE-207ENST00000447873 RIMBP3Q9UFD9 1639 aa30.57■■■□□ 2.48
SGCE-207ENST00000447873 UACAQ9BZF9 1416 aa30.55■■■□□ 2.48
SGCE-207ENST00000447873 NUP153P49790 1475 aaKnown RBP30.52■■■□□ 2.48
SGCE-207ENST00000447873 LRRIQ1Q96JM4 1722 aa30.52■■■□□ 2.48
SGCE-207ENST00000447873 EPRSP07814 1512 aaKnown RBP30.48■■■□□ 2.47
SGCE-207ENST00000447873 ABCC2Q92887 1545 aa30.48■■■□□ 2.47
SGCE-207ENST00000447873 CCDC18Q5T9S5 1454 aa30.47■■■□□ 2.47
SGCE-207ENST00000447873 TIAM1Q13009 1591 aa30.47■■■□□ 2.47
SGCE-207ENST00000447873 MAP3K1Q13233 1512 aa30.47■■■□□ 2.47
SGCE-207ENST00000447873 ARID3CA6NKF2 412 aa30.46■■■□□ 2.47
SGCE-207ENST00000447873 CFAP43Q8NDM7 1665 aa30.46■■■□□ 2.47
SGCE-207ENST00000447873 UHRF1BP1LA0JNW5 1464 aa30.44■■■□□ 2.46
SGCE-207ENST00000447873 CDK13Q14004 1512 aaKnown RBP30.42■■■□□ 2.46
SGCE-207ENST00000447873 PPARGC1BQ86YN6 1023 aaKnown RBP30.41■■■□□ 2.46
SGCE-207ENST00000447873 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.4■■■□□ 2.46
SGCE-207ENST00000447873 HNRNPUL2Q1KMD3 747 aaKnown RBP30.4■■■□□ 2.46
SGCE-207ENST00000447873 ADCY10Q96PN6 1610 aa30.39■■■□□ 2.45
SGCE-207ENST00000447873 CYB5RLQ6IPT4 315 aa30.37■■■□□ 2.45
SGCE-207ENST00000447873 ATP10BO94823 1461 aa30.36■■■□□ 2.45
SGCE-207ENST00000447873 KANK4Q5T7N3 995 aaPredicted RBP30.35■■■□□ 2.45
SGCE-207ENST00000447873 LRRC9Q6ZRR7 1453 aa30.32■■■□□ 2.44
SGCE-207ENST00000447873 CDK11AQ9UQ88 783 aaPredicted RBP30.31■■■□□ 2.44
SGCE-207ENST00000447873 KDM5BQ9UGL1 1544 aa30.31■■■□□ 2.44
SGCE-207ENST00000447873 ZCCHC11Q5TAX3 1644 aaKnown RBP30.28■■■□□ 2.44
SGCE-207ENST00000447873 MTUS2Q5JR59 1369 aa30.28■■■□□ 2.44
SGCE-207ENST00000447873 DNAJC5Q9H3Z4 198 aa30.25■■■□□ 2.43
SGCE-207ENST00000447873 MAGI3Q5TCQ9 1506 aa30.24■■■□□ 2.43
SGCE-207ENST00000447873 EHBP1L1Q8N3D4 1523 aa30.23■■■□□ 2.43
SGCE-207ENST00000447873 NPM1P06748 294 aaKnown RBP eCLIP30.23■■■□□ 2.43
SGCE-207ENST00000447873 PLEKHD1A6NEE1 506 aa30.22■■■□□ 2.43
SGCE-207ENST00000447873 TROQ12816 1431 aaPredicted RBP30.17■■■□□ 2.42
SGCE-207ENST00000447873 SUPT6HQ7KZ85 1726 aaKnown RBP30.14■■■□□ 2.42
SGCE-207ENST00000447873 NCOA2Q15596 1464 aa30.07■■■□□ 2.4
SGCE-207ENST00000447873 ASXL2Q76L83 1435 aa30.06■■■□□ 2.4
SGCE-207ENST00000447873 KIF14Q15058 1648 aa30.06■■■□□ 2.4
SGCE-207ENST00000447873 WDR7Q9Y4E6 1490 aa30.05■■■□□ 2.4
SGCE-207ENST00000447873 KCNH8Q96L42 1107 aa30.02■■■□□ 2.4
SGCE-207ENST00000447873 MAPKBP1O60336 1514 aa30■■■□□ 2.39
SGCE-207ENST00000447873 PHLDB1Q86UU1 1377 aa29.99■■■□□ 2.39
SGCE-207ENST00000447873 CCNB3Q8WWL7 1395 aa29.94■■■□□ 2.38
SGCE-207ENST00000447873 ABCC10Q5T3U5 1492 aa29.92■■■□□ 2.38
SGCE-207ENST00000447873 MYOM3Q5VTT5 1437 aa29.91■■■□□ 2.38
SGCE-207ENST00000447873 TRIM26Q12899 539 aaPredicted RBP29.91■■■□□ 2.38
SGCE-207ENST00000447873 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.91■■■□□ 2.38
SGCE-207ENST00000447873 TTC37Q6PGP7 1564 aa29.88■■■□□ 2.37
SGCE-207ENST00000447873 ITSN2Q9NZM3 1697 aa29.87■■■□□ 2.37
SGCE-207ENST00000447873 CDC42BPAQ5VT25 1732 aa29.86■■■□□ 2.37
SGCE-207ENST00000447873 GPATCH8Q9UKJ3 1502 aaKnown RBP29.85■■■□□ 2.37
SGCE-207ENST00000447873 FGD6Q6ZV73 1430 aa29.84■■■□□ 2.37
SGCE-207ENST00000447873 RRBP1Q9P2E9 1410 aaKnown RBP29.84■■■□□ 2.37
SGCE-207ENST00000447873 MYO5CQ9NQX4 1742 aa29.82■■■□□ 2.36
SGCE-207ENST00000447873 ABCA9Q8IUA7 1624 aa29.82■■■□□ 2.36
SGCE-207ENST00000447873 MIA2Q96PC5 1412 aa29.81■■■□□ 2.36
SGCE-207ENST00000447873 CFDP1Q9UEE9 299 aaPredicted RBP29.79■■■□□ 2.36
SGCE-207ENST00000447873 PREX2Q70Z35 1606 aa29.78■■■□□ 2.36
SGCE-207ENST00000447873 CDC42BPBQ9Y5S2 1711 aa29.77■■■□□ 2.36
SGCE-207ENST00000447873 PTPN23Q9H3S7 1636 aa29.76■■■□□ 2.36
SGCE-207ENST00000447873 DIP2BQ9P265 1576 aa29.74■■■□□ 2.35
SGCE-207ENST00000447873 FAM50AQ14320 339 aaKnown RBP29.73■■■□□ 2.35
SGCE-207ENST00000447873 PLCH2O75038 1416 aa29.73■■■□□ 2.35
SGCE-207ENST00000447873 GLI2P10070 1586 aa29.73■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms