RNA–Protein interactions for RNA: ENST00000447839.6

ERCC6-203, Transcript of ERCC excision repair 6, chromatin remodeling factor, humanhuman

TSL 2 BASIC

Gene ERCC6, Length 3,411 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6-203ENST00000447839 KANK4Q5T7N3 995 aaPredicted RBP17.84■□□□□ 0.45
ERCC6-203ENST00000447839 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.82■□□□□ 0.44
ERCC6-203ENST00000447839 GRIN2BQ13224 1484 aa17.81■□□□□ 0.44
ERCC6-203ENST00000447839 FHOD3Q2V2M9 1422 aa17.8■□□□□ 0.44
ERCC6-203ENST00000447839 HNRNPUL2Q1KMD3 747 aaKnown RBP17.8■□□□□ 0.44
ERCC6-203ENST00000447839 FHAD1B1AJZ9 1412 aa17.8■□□□□ 0.44
ERCC6-203ENST00000447839 PBRM1Q86U86 1689 aa17.8■□□□□ 0.44
ERCC6-203ENST00000447839 ZEB1P37275 1124 aaPredicted RBP17.79■□□□□ 0.44
ERCC6-203ENST00000447839 CTTNBP2Q8WZ74 1663 aa17.79■□□□□ 0.44
ERCC6-203ENST00000447839 CCER1Q8TC90 406 aaPredicted RBP17.78■□□□□ 0.44
ERCC6-203ENST00000447839 THOC2Q8NI27 1593 aaKnown RBP17.78■□□□□ 0.44
ERCC6-203ENST00000447839 EFCAB5A4FU69 1503 aa17.74■□□□□ 0.43
ERCC6-203ENST00000447839 ADAMTS12P58397 1594 aa17.73■□□□□ 0.43
ERCC6-203ENST00000447839 FBLN2P98095 1184 aa17.71■□□□□ 0.43
ERCC6-203ENST00000447839 SNAPC4Q5SXM2 1469 aa17.7■□□□□ 0.42
ERCC6-203ENST00000447839 EIF4G3O43432 1585 aaKnown RBP17.7■□□□□ 0.42
ERCC6-203ENST00000447839 CHMP7Q8WUX9 453 aaPredicted RBP17.68■□□□□ 0.42
ERCC6-203ENST00000447839 PCF11O94913 1555 aaKnown RBP17.67■□□□□ 0.42
ERCC6-203ENST00000447839 FMN1Q68DA7 1419 aa17.67■□□□□ 0.42
ERCC6-203ENST00000447839 TIAM1Q13009 1591 aa17.65■□□□□ 0.42
ERCC6-203ENST00000447839 CASKIN1Q8WXD9 1431 aa17.63■□□□□ 0.41
ERCC6-203ENST00000447839 IQGAP2Q13576 1575 aa17.62■□□□□ 0.41
ERCC6-203ENST00000447839 FYCO1Q9BQS8 1478 aa17.62■□□□□ 0.41
ERCC6-203ENST00000447839 MAP3K1Q13233 1512 aa17.61■□□□□ 0.41
ERCC6-203ENST00000447839 SAMD9Q5K651 1589 aa17.61■□□□□ 0.41
ERCC6-203ENST00000447839 LRRC9Q6ZRR7 1453 aa17.61■□□□□ 0.41
ERCC6-203ENST00000447839 GRIN2AQ12879 1464 aa17.6■□□□□ 0.41
ERCC6-203ENST00000447839 ITGAEP38570 1179 aa17.6■□□□□ 0.41
ERCC6-203ENST00000447839 MAGI1Q96QZ7 1491 aaPredicted RBP17.59■□□□□ 0.41
ERCC6-203ENST00000447839 CCNB3Q8WWL7 1395 aa17.57■□□□□ 0.4
ERCC6-203ENST00000447839 SYNJ2O15056 1496 aa17.56■□□□□ 0.4
ERCC6-203ENST00000447839 KIAA0586Q9BVV6 1533 aa17.55■□□□□ 0.4
ERCC6-203ENST00000447839 RRBP1Q9P2E9 1410 aaKnown RBP17.55■□□□□ 0.4
ERCC6-203ENST00000447839 CFAP43Q8NDM7 1665 aa17.53■□□□□ 0.4
ERCC6-203ENST00000447839 MTUS2Q5JR59 1369 aa17.53■□□□□ 0.4
ERCC6-203ENST00000447839 ARID3CA6NKF2 412 aa17.53■□□□□ 0.4
ERCC6-203ENST00000447839 FAM50AQ14320 339 aaKnown RBP17.52■□□□□ 0.4
ERCC6-203ENST00000447839 PHLDB1Q86UU1 1377 aa17.51■□□□□ 0.39
ERCC6-203ENST00000447839 UGGT2Q9NYU1 1516 aa17.49■□□□□ 0.39
ERCC6-203ENST00000447839 CEP170Q5SW79 1584 aa17.46■□□□□ 0.39
ERCC6-203ENST00000447839 JPH4Q96JJ6 628 aa17.45■□□□□ 0.38
ERCC6-203ENST00000447839 DISP1Q96F81 1524 aa17.44■□□□□ 0.38
ERCC6-203ENST00000447839 KIAA0556O60303 1618 aa17.42■□□□□ 0.38
ERCC6-203ENST00000447839 NUP160Q12769 1436 aa17.41■□□□□ 0.38
ERCC6-203ENST00000447839 HECW1Q76N89 1606 aa17.41■□□□□ 0.38
ERCC6-203ENST00000447839 LRRIQ1Q96JM4 1722 aa17.4■□□□□ 0.38
ERCC6-203ENST00000447839 CCDC18Q5T9S5 1454 aa17.4■□□□□ 0.38
ERCC6-203ENST00000447839 CARMIL2Q6F5E8 1435 aa17.39■□□□□ 0.37
ERCC6-203ENST00000447839 EPRSP07814 1512 aaKnown RBP17.38■□□□□ 0.37
ERCC6-203ENST00000447839 CDK13Q14004 1512 aaKnown RBP17.37■□□□□ 0.37
ERCC6-203ENST00000447839 NCOA2Q15596 1464 aa17.36■□□□□ 0.37
ERCC6-203ENST00000447839 EHBP1L1Q8N3D4 1523 aa17.35■□□□□ 0.37
ERCC6-203ENST00000447839 FGD6Q6ZV73 1430 aa17.34■□□□□ 0.37
ERCC6-203ENST00000447839 MAGI3Q5TCQ9 1506 aa17.32■□□□□ 0.36
ERCC6-203ENST00000447839 SUPT6HQ7KZ85 1726 aaKnown RBP17.32■□□□□ 0.36
ERCC6-203ENST00000447839 CDK11AQ9UQ88 783 aaPredicted RBP17.31■□□□□ 0.36
ERCC6-203ENST00000447839 MYOM3Q5VTT5 1437 aa17.3■□□□□ 0.36
ERCC6-203ENST00000447839 PLB1Q6P1J6 1458 aa17.3■□□□□ 0.36
ERCC6-203ENST00000447839 RAPGEF6Q8TEU7 1601 aa17.29■□□□□ 0.36
ERCC6-203ENST00000447839 DHX57Q6P158 1386 aaKnown RBP17.29■□□□□ 0.36
ERCC6-203ENST00000447839 RAB3GAP2Q9H2M9 1393 aa17.29■□□□□ 0.36
ERCC6-203ENST00000447839 NUP153P49790 1475 aaKnown RBP17.29■□□□□ 0.36
ERCC6-203ENST00000447839 PRG4Q92954 1404 aaPredicted RBP17.27■□□□□ 0.36
ERCC6-203ENST00000447839 SETD5Q9C0A6 1442 aa17.27■□□□□ 0.36
ERCC6-203ENST00000447839 CHD1O14646 1710 aa17.27■□□□□ 0.35
ERCC6-203ENST00000447839 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.26■□□□□ 0.35
ERCC6-203ENST00000447839 CLSPNQ9HAW4 1339 aa17.22■□□□□ 0.35
ERCC6-203ENST00000447839 PTPRGP23470 1445 aa17.21■□□□□ 0.35
ERCC6-203ENST00000447839 ARHGEF11O15085 1522 aa17.21■□□□□ 0.34
ERCC6-203ENST00000447839 PTPN23Q9H3S7 1636 aa17.19■□□□□ 0.34
ERCC6-203ENST00000447839 CHIC2Q9UKJ5 165 aa17.19■□□□□ 0.34
ERCC6-203ENST00000447839 PLEKHD1A6NEE1 506 aa17.18■□□□□ 0.34
ERCC6-203ENST00000447839 PTPRKQ15262 1439 aa17.17■□□□□ 0.34
ERCC6-203ENST00000447839 TROQ12816 1431 aaPredicted RBP17.16■□□□□ 0.34
ERCC6-203ENST00000447839 MIA2Q96PC5 1412 aa17.14■□□□□ 0.33
ERCC6-203ENST00000447839 RRP7BPQ9NSQ0 103 aa17.14■□□□□ 0.33
ERCC6-203ENST00000447839 ABCA8O94911 1581 aa17.13■□□□□ 0.33
ERCC6-203ENST00000447839 ZNF777Q9ULD5 760 aaPredicted RBP17.12■□□□□ 0.33
ERCC6-203ENST00000447839 CFDP1Q9UEE9 299 aaPredicted RBP17.12■□□□□ 0.33
ERCC6-203ENST00000447839 ZNF644Q9H582 1327 aaPredicted RBP17.12■□□□□ 0.33
ERCC6-203ENST00000447839 ATP10BO94823 1461 aa17.11■□□□□ 0.33
ERCC6-203ENST00000447839 TCOF1Q13428 1488 aaKnown RBP17.11■□□□□ 0.33
ERCC6-203ENST00000447839 HFM1A2PYH4 1435 aa17.09■□□□□ 0.33
ERCC6-203ENST00000447839 ZNF316A6NFI3 1004 aaPredicted RBP17.08■□□□□ 0.33
ERCC6-203ENST00000447839 NEUROD1Q13562 356 aa17.08■□□□□ 0.32
ERCC6-203ENST00000447839 ERCC6L2Q5T890 1561 aa17.07■□□□□ 0.32
ERCC6-203ENST00000447839 NAIPQ13075 1403 aa17.07■□□□□ 0.32
ERCC6-203ENST00000447839 UACAQ9BZF9 1416 aa17.07■□□□□ 0.32
ERCC6-203ENST00000447839 SHROOM2Q13796 1616 aa17.07■□□□□ 0.32
ERCC6-203ENST00000447839 KIF14Q15058 1648 aa17.05■□□□□ 0.32
ERCC6-203ENST00000447839 MAPKBP1O60336 1514 aa17.04■□□□□ 0.32
ERCC6-203ENST00000447839 SIN3AQ96ST3 1273 aa17.04■□□□□ 0.32
ERCC6-203ENST00000447839 TRIM52Q96A61 297 aa17.03■□□□□ 0.32
ERCC6-203ENST00000447839 DIEXFQ68CQ4 756 aaKnown RBP17.03■□□□□ 0.32
ERCC6-203ENST00000447839 GPATCH8Q9UKJ3 1502 aaKnown RBP17.03■□□□□ 0.32
ERCC6-203ENST00000447839 CLASP1Q7Z460 1538 aa17.02■□□□□ 0.31
ERCC6-203ENST00000447839 DAPK1P53355 1430 aa17.01■□□□□ 0.31
ERCC6-203ENST00000447839 ABCC5O15440 1437 aa16.99■□□□□ 0.31
ERCC6-203ENST00000447839 ADCY10Q96PN6 1610 aa16.99■□□□□ 0.31
ERCC6-203ENST00000447839 CAMSAP2Q08AD1 1489 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms