RNA–Protein interactions for RNA: ENST00000447784.1

LINC00408-201, long intergenic non-protein coding RNA 408, humanhuman

TSL 5 BASIC

Gene LINC00408, Length 560 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00408-201ENST00000447784 CARMIL1Q5VZK9 1371 aa19.29■□□□□ 0.68
LINC00408-201ENST00000447784 JPH4Q96JJ6 628 aa19.27■□□□□ 0.68
LINC00408-201ENST00000447784 SHROOM2Q13796 1616 aa19.25■□□□□ 0.67
LINC00408-201ENST00000447784 KIAA0586Q9BVV6 1533 aa19.23■□□□□ 0.67
LINC00408-201ENST00000447784 RUSC2Q8N2Y8 1516 aa19.2■□□□□ 0.66
LINC00408-201ENST00000447784 ERCC6L2Q5T890 1561 aa19.2■□□□□ 0.66
LINC00408-201ENST00000447784 PRG4Q92954 1404 aaPredicted RBP19.2■□□□□ 0.66
LINC00408-201ENST00000447784 FAM9AQ8IZU1 332 aaPredicted RBP19.17■□□□□ 0.66
LINC00408-201ENST00000447784 RAPGEF2Q9Y4G8 1499 aa19.15■□□□□ 0.66
LINC00408-201ENST00000447784 EEA1Q15075 1411 aa19.13■□□□□ 0.65
LINC00408-201ENST00000447784 CSRNP3Q8WYN3 585 aa19.12■□□□□ 0.65
LINC00408-201ENST00000447784 TRHP20396 242 aaPredicted RBP19.07■□□□□ 0.64
LINC00408-201ENST00000447784 PRXQ9BXM0 1461 aa19.05■□□□□ 0.64
LINC00408-201ENST00000447784 CARMIL2Q6F5E8 1435 aa19.03■□□□□ 0.64
LINC00408-201ENST00000447784 IQGAP2Q13576 1575 aa19.02■□□□□ 0.64
LINC00408-201ENST00000447784 TNIKQ9UKE5 1360 aa18.98■□□□□ 0.63
LINC00408-201ENST00000447784 PTPRGP23470 1445 aa18.98■□□□□ 0.63
LINC00408-201ENST00000447784 UGGT2Q9NYU1 1516 aa18.96■□□□□ 0.63
LINC00408-201ENST00000447784 NPM1P06748 294 aaKnown RBP eCLIP18.94■□□□□ 0.62
LINC00408-201ENST00000447784 DISP1Q96F81 1524 aa18.94■□□□□ 0.62
LINC00408-201ENST00000447784 EHMT2Q96KQ7 1210 aa18.9■□□□□ 0.62
LINC00408-201ENST00000447784 ADCY10Q96PN6 1610 aa18.88■□□□□ 0.61
LINC00408-201ENST00000447784 GOLGA3Q08378 1498 aa18.86■□□□□ 0.61
LINC00408-201ENST00000447784 UBTFP17480 764 aaKnown RBP18.86■□□□□ 0.61
LINC00408-201ENST00000447784 MAPKBP1O60336 1514 aa18.85■□□□□ 0.61
LINC00408-201ENST00000447784 TTBK1Q5TCY1 1321 aaPredicted RBP18.85■□□□□ 0.61
LINC00408-201ENST00000447784 KIAA0556O60303 1618 aa18.85■□□□□ 0.61
LINC00408-201ENST00000447784 UHRF1BP1LA0JNW5 1464 aa18.84■□□□□ 0.61
LINC00408-201ENST00000447784 UACAQ9BZF9 1416 aa18.84■□□□□ 0.61
LINC00408-201ENST00000447784 CTTNBP2Q8WZ74 1663 aa18.84■□□□□ 0.61
LINC00408-201ENST00000447784 ABCC2Q92887 1545 aa18.81■□□□□ 0.6
LINC00408-201ENST00000447784 ABCC10Q5T3U5 1492 aa18.8■□□□□ 0.6
LINC00408-201ENST00000447784 KIF21BO75037 1637 aa18.77■□□□□ 0.6
LINC00408-201ENST00000447784 FAM69CQ0P6D2 419 aa18.76■□□□□ 0.59
LINC00408-201ENST00000447784 KDM5BQ9UGL1 1544 aa18.74■□□□□ 0.59
LINC00408-201ENST00000447784 PLB1Q6P1J6 1458 aa18.71■□□□□ 0.59
LINC00408-201ENST00000447784 LOC105371045A0A1W2PR82 267 aa18.71■□□□□ 0.59
LINC00408-201ENST00000447784 RANGAP1P46060 587 aaPredicted RBP18.71■□□□□ 0.59
LINC00408-201ENST00000447784 ASXL2Q76L83 1435 aa18.71■□□□□ 0.59
LINC00408-201ENST00000447784 DIP2BQ9P265 1576 aa18.7■□□□□ 0.58
LINC00408-201ENST00000447784 P3H3Q8IVL6 736 aa18.68■□□□□ 0.58
LINC00408-201ENST00000447784 ABCA8O94911 1581 aa18.68■□□□□ 0.58
LINC00408-201ENST00000447784 KIF13AQ9H1H9 1805 aa18.67■□□□□ 0.58
LINC00408-201ENST00000447784 SAMD9Q5K651 1589 aa18.67■□□□□ 0.58
LINC00408-201ENST00000447784 ZCCHC11Q5TAX3 1644 aaKnown RBP18.61■□□□□ 0.57
LINC00408-201ENST00000447784 GLI2P10070 1586 aa18.61■□□□□ 0.57
LINC00408-201ENST00000447784 EPRSP07814 1512 aaKnown RBP18.59■□□□□ 0.57
LINC00408-201ENST00000447784 EFCAB5A4FU69 1503 aa18.59■□□□□ 0.57
LINC00408-201ENST00000447784 WDR7Q9Y4E6 1490 aa18.58■□□□□ 0.57
LINC00408-201ENST00000447784 FHOD3Q2V2M9 1422 aa18.57■□□□□ 0.56
LINC00408-201ENST00000447784 ATP10BO94823 1461 aa18.55■□□□□ 0.56
LINC00408-201ENST00000447784 RAPGEF6Q8TEU7 1601 aa18.51■□□□□ 0.55
LINC00408-201ENST00000447784 CLIP1P30622 1438 aa18.5■□□□□ 0.55
LINC00408-201ENST00000447784 NUP153P49790 1475 aaKnown RBP18.49■□□□□ 0.55
LINC00408-201ENST00000447784 ARID3CA6NKF2 412 aa18.48■□□□□ 0.55
LINC00408-201ENST00000447784 KCNH8Q96L42 1107 aa18.48■□□□□ 0.55
LINC00408-201ENST00000447784 ARHGAP35Q9NRY4 1499 aa18.47■□□□□ 0.55
LINC00408-201ENST00000447784 MAP3K4Q9Y6R4 1608 aa18.47■□□□□ 0.55
LINC00408-201ENST00000447784 CEP162Q5TB80 1403 aa18.47■□□□□ 0.55
LINC00408-201ENST00000447784 TEX14Q8IWB6 1497 aa18.46■□□□□ 0.55
LINC00408-201ENST00000447784 FMN1Q68DA7 1419 aa18.45■□□□□ 0.54
LINC00408-201ENST00000447784 CD109Q6YHK3 1445 aa18.45■□□□□ 0.54
LINC00408-201ENST00000447784 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.44■□□□□ 0.54
LINC00408-201ENST00000447784 HNRNPUL2Q1KMD3 747 aaKnown RBP18.44■□□□□ 0.54
LINC00408-201ENST00000447784 KDM6BO15054 1643 aa18.44■□□□□ 0.54
LINC00408-201ENST00000447784 PPRC1Q5VV67 1664 aaKnown RBP18.43■□□□□ 0.54
LINC00408-201ENST00000447784 MAGI3Q5TCQ9 1506 aa18.43■□□□□ 0.54
LINC00408-201ENST00000447784 TSPOAP1O95153 1857 aa18.41■□□□□ 0.54
LINC00408-201ENST00000447784 PLEKHD1A6NEE1 506 aa18.4■□□□□ 0.54
LINC00408-201ENST00000447784 ATP1B4Q9UN42 357 aaPredicted RBP18.38■□□□□ 0.53
LINC00408-201ENST00000447784 CFAP43Q8NDM7 1665 aa18.38■□□□□ 0.53
LINC00408-201ENST00000447784 COL17A1Q9UMD9 1497 aaPredicted RBP18.36■□□□□ 0.53
LINC00408-201ENST00000447784 FOXD1Q16676 465 aa18.34■□□□□ 0.53
LINC00408-201ENST00000447784 ABCA9Q8IUA7 1624 aa18.34■□□□□ 0.53
LINC00408-201ENST00000447784 PHLDB1Q86UU1 1377 aa18.32■□□□□ 0.52
LINC00408-201ENST00000447784 HECW1Q76N89 1606 aa18.31■□□□□ 0.52
LINC00408-201ENST00000447784 CDK11AQ9UQ88 783 aaPredicted RBP18.31■□□□□ 0.52
LINC00408-201ENST00000447784 CDK13Q14004 1512 aaKnown RBP18.3■□□□□ 0.52
LINC00408-201ENST00000447784 CASKIN1Q8WXD9 1431 aa18.28■□□□□ 0.52
LINC00408-201ENST00000447784 ARAP3Q8WWN8 1544 aa18.27■□□□□ 0.51
LINC00408-201ENST00000447784 NEO1Q92859 1461 aa18.26■□□□□ 0.51
LINC00408-201ENST00000447784 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.23■□□□□ 0.51
LINC00408-201ENST00000447784 VPS8Q8N3P4 1428 aa18.23■□□□□ 0.51
LINC00408-201ENST00000447784 CCDC18Q5T9S5 1454 aa18.22■□□□□ 0.51
LINC00408-201ENST00000447784 TROQ12816 1431 aaPredicted RBP18.22■□□□□ 0.51
LINC00408-201ENST00000447784 FYCO1Q9BQS8 1478 aa18.21■□□□□ 0.51
LINC00408-201ENST00000447784 APLP2Q06481 763 aa18.21■□□□□ 0.51
LINC00408-201ENST00000447784 PCF11O94913 1555 aaKnown RBP18.19■□□□□ 0.5
LINC00408-201ENST00000447784 PLCH2O75038 1416 aa18.18■□□□□ 0.5
LINC00408-201ENST00000447784 FANCAO15360 1455 aa18.17■□□□□ 0.5
LINC00408-201ENST00000447784 TTC37Q6PGP7 1564 aa18.17■□□□□ 0.5
LINC00408-201ENST00000447784 AKNAQ7Z591 1439 aa18.16■□□□□ 0.5
LINC00408-201ENST00000447784 KDM4FA0A1W2PPD8 638 aa18.16■□□□□ 0.5
LINC00408-201ENST00000447784 RAPGEF3O95398 923 aa18.15■□□□□ 0.5
LINC00408-201ENST00000447784 EFCAB2Q5VUJ9 269 aa18.13■□□□□ 0.49
LINC00408-201ENST00000447784 DENND4BO75064 1496 aaPredicted RBP18.13■□□□□ 0.49
LINC00408-201ENST00000447784 CFAP74Q9C0B2 1584 aa18.13■□□□□ 0.49
LINC00408-201ENST00000447784 KIF14Q15058 1648 aa18.12■□□□□ 0.49
LINC00408-201ENST00000447784 LRRIQ1Q96JM4 1722 aa18.11■□□□□ 0.49
LINC00408-201ENST00000447784 FRMPD1Q5SYB0 1578 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms