RNA–Protein interactions for RNA: ENST00000447683.2

OTUB1-204, Transcript of OTU deubiquitinase, ubiquitin aldehyde binding 1, humanhuman

TSL 2

Gene OTUB1, Length 2,315 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB1-204ENST00000447683 FHAD1B1AJZ9 1412 aa24.41■■□□□ 1.5
OTUB1-204ENST00000447683 EFCAB5A4FU69 1503 aa24.41■■□□□ 1.5
OTUB1-204ENST00000447683 GAPVD1Q14C86 1478 aa24.37■■□□□ 1.49
OTUB1-204ENST00000447683 TARBP1Q13395 1621 aaKnown RBP24.36■■□□□ 1.49
OTUB1-204ENST00000447683 TDRD9Q8NDG6 1382 aaKnown RBP24.35■■□□□ 1.49
OTUB1-204ENST00000447683 CFAP43Q8NDM7 1665 aa24.34■■□□□ 1.49
OTUB1-204ENST00000447683 PCF11O94913 1555 aaKnown RBP24.34■■□□□ 1.49
OTUB1-204ENST00000447683 CCNB3Q8WWL7 1395 aa24.32■■□□□ 1.48
OTUB1-204ENST00000447683 LRRC9Q6ZRR7 1453 aa24.31■■□□□ 1.48
OTUB1-204ENST00000447683 AQRO60306 1485 aaKnown RBP eCLIP24.29■■□□□ 1.488e-6■■■■□ 23.2
OTUB1-204ENST00000447683 FHOD3Q2V2M9 1422 aa24.28■■□□□ 1.48
OTUB1-204ENST00000447683 FYCO1Q9BQS8 1478 aa24.27■■□□□ 1.48
OTUB1-204ENST00000447683 P3H3Q8IVL6 736 aa24.24■■□□□ 1.47
OTUB1-204ENST00000447683 CASKIN1Q8WXD9 1431 aa24.24■■□□□ 1.47
OTUB1-204ENST00000447683 MRC2Q9UBG0 1479 aa24.24■■□□□ 1.47
OTUB1-204ENST00000447683 CLSPNQ9HAW4 1339 aa24.24■■□□□ 1.47
OTUB1-204ENST00000447683 SAMD9Q5K651 1589 aa24.23■■□□□ 1.47
OTUB1-204ENST00000447683 PBRM1Q86U86 1689 aa24.21■■□□□ 1.47
OTUB1-204ENST00000447683 DHX57Q6P158 1386 aaKnown RBP24.2■■□□□ 1.47
OTUB1-204ENST00000447683 FMN1Q68DA7 1419 aa24.19■■□□□ 1.46
OTUB1-204ENST00000447683 PHLDB1Q86UU1 1377 aa24.15■■□□□ 1.46
OTUB1-204ENST00000447683 SNAPC4Q5SXM2 1469 aa24.15■■□□□ 1.46
OTUB1-204ENST00000447683 ZNF316A6NFI3 1004 aaPredicted RBP24.14■■□□□ 1.45
OTUB1-204ENST00000447683 DIEXFQ68CQ4 756 aaKnown RBP24.13■■□□□ 1.45
OTUB1-204ENST00000447683 ADAMTS12P58397 1594 aa24.1■■□□□ 1.45
OTUB1-204ENST00000447683 WDR62O43379 1518 aa24.09■■□□□ 1.45
OTUB1-204ENST00000447683 ATP1B4Q9UN42 357 aaPredicted RBP24.06■■□□□ 1.44
OTUB1-204ENST00000447683 GRIN2BQ13224 1484 aa24.05■■□□□ 1.44
OTUB1-204ENST00000447683 THOC2Q8NI27 1593 aaKnown RBP24.05■■□□□ 1.44
OTUB1-204ENST00000447683 LRRIQ1Q96JM4 1722 aa24.05■■□□□ 1.44
OTUB1-204ENST00000447683 IFT140Q96RY7 1462 aa24.05■■□□□ 1.44
OTUB1-204ENST00000447683 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.02■■□□□ 1.44
OTUB1-204ENST00000447683 ITGAEP38570 1179 aa24.01■■□□□ 1.43
OTUB1-204ENST00000447683 RAB3GAP2Q9H2M9 1393 aa24■■□□□ 1.43
OTUB1-204ENST00000447683 IQGAP2Q13576 1575 aa23.99■■□□□ 1.43
OTUB1-204ENST00000447683 SETD5Q9C0A6 1442 aa23.97■■□□□ 1.43
OTUB1-204ENST00000447683 ZNF608Q9ULD9 1512 aaPredicted RBP23.96■■□□□ 1.43
OTUB1-204ENST00000447683 FAM50AQ14320 339 aaKnown RBP23.94■■□□□ 1.42
OTUB1-204ENST00000447683 MTUS2Q5JR59 1369 aa23.93■■□□□ 1.42
OTUB1-204ENST00000447683 FGD6Q6ZV73 1430 aa23.91■■□□□ 1.42
OTUB1-204ENST00000447683 UGGT2Q9NYU1 1516 aa23.9■■□□□ 1.42
OTUB1-204ENST00000447683 EHBP1L1Q8N3D4 1523 aa23.89■■□□□ 1.42
OTUB1-204ENST00000447683 MAPKBP1O60336 1514 aa23.89■■□□□ 1.41
OTUB1-204ENST00000447683 SUPT6HQ7KZ85 1726 aaKnown RBP23.88■■□□□ 1.41
OTUB1-204ENST00000447683 CCDC18Q5T9S5 1454 aa23.88■■□□□ 1.41
OTUB1-204ENST00000447683 EIF4G3O43432 1585 aaKnown RBP23.87■■□□□ 1.41
OTUB1-204ENST00000447683 HECW1Q76N89 1606 aa23.87■■□□□ 1.41
OTUB1-204ENST00000447683 NCOA2Q15596 1464 aa23.85■■□□□ 1.41
OTUB1-204ENST00000447683 ERCC6Q03468 1493 aa23.84■■□□□ 1.41
OTUB1-204ENST00000447683 ARHGEF11O15085 1522 aa23.83■■□□□ 1.4
OTUB1-204ENST00000447683 KIAA0586Q9BVV6 1533 aa23.82■■□□□ 1.4
OTUB1-204ENST00000447683 MYOM3Q5VTT5 1437 aa23.82■■□□□ 1.4
OTUB1-204ENST00000447683 MAGI3Q5TCQ9 1506 aa23.81■■□□□ 1.4
OTUB1-204ENST00000447683 GRIN2AQ12879 1464 aa23.79■■□□□ 1.4
OTUB1-204ENST00000447683 EPRSP07814 1512 aaKnown RBP23.78■■□□□ 1.4
OTUB1-204ENST00000447683 KIAA0556O60303 1618 aa23.76■■□□□ 1.39
OTUB1-204ENST00000447683 MAGI1Q96QZ7 1491 aaPredicted RBP23.75■■□□□ 1.39
OTUB1-204ENST00000447683 DISP1Q96F81 1524 aa23.74■■□□□ 1.39
OTUB1-204ENST00000447683 PTPN23Q9H3S7 1636 aa23.73■■□□□ 1.39
OTUB1-204ENST00000447683 PTPRKQ15262 1439 aa23.72■■□□□ 1.39
OTUB1-204ENST00000447683 SCAF1Q9H7N4 1312 aaKnown RBP23.71■■□□□ 1.39
OTUB1-204ENST00000447683 HFM1A2PYH4 1435 aa23.7■■□□□ 1.38
OTUB1-204ENST00000447683 TCOF1Q13428 1488 aaKnown RBP23.69■■□□□ 1.38
OTUB1-204ENST00000447683 CDK13Q14004 1512 aaKnown RBP23.69■■□□□ 1.38
OTUB1-204ENST00000447683 SYNJ2O15056 1496 aa23.67■■□□□ 1.38
OTUB1-204ENST00000447683 ACIN1Q9UKV3 1341 aaKnown RBP23.67■■□□□ 1.38
OTUB1-204ENST00000447683 MIER1Q8N108 512 aa23.65■■□□□ 1.38
OTUB1-204ENST00000447683 CEP170Q5SW79 1584 aa23.64■■□□□ 1.37
OTUB1-204ENST00000447683 CENPBP07199 599 aaPredicted RBP23.62■■□□□ 1.37
OTUB1-204ENST00000447683 RAPGEF6Q8TEU7 1601 aa23.62■■□□□ 1.37
OTUB1-204ENST00000447683 NAIPQ13075 1403 aa23.62■■□□□ 1.37
OTUB1-204ENST00000447683 NEUROD1Q13562 356 aa23.61■■□□□ 1.37
OTUB1-204ENST00000447683 TIMELESSQ9UNS1 1208 aa23.61■■□□□ 1.37
OTUB1-204ENST00000447683 MIA2Q96PC5 1412 aa23.61■■□□□ 1.37
OTUB1-204ENST00000447683 UACAQ9BZF9 1416 aa23.59■■□□□ 1.37
OTUB1-204ENST00000447683 NUP153P49790 1475 aaKnown RBP23.59■■□□□ 1.37
OTUB1-204ENST00000447683 CHMP7Q8WUX9 453 aaPredicted RBP23.58■■□□□ 1.37
OTUB1-204ENST00000447683 SIN3AQ96ST3 1273 aa23.58■■□□□ 1.36
OTUB1-204ENST00000447683 NUP160Q12769 1436 aa23.57■■□□□ 1.36
OTUB1-204ENST00000447683 GCC2Q8IWJ2 1684 aa23.55■■□□□ 1.36
OTUB1-204ENST00000447683 AKNAQ7Z591 1439 aa23.54■■□□□ 1.36
OTUB1-204ENST00000447683 ARID3CA6NKF2 412 aa23.48■■□□□ 1.35
OTUB1-204ENST00000447683 CARMIL2Q6F5E8 1435 aa23.46■■□□□ 1.35
OTUB1-204ENST00000447683 CDK11AQ9UQ88 783 aaPredicted RBP23.45■■□□□ 1.34
OTUB1-204ENST00000447683 FBLN2P98095 1184 aa23.44■■□□□ 1.34
OTUB1-204ENST00000447683 JPH4Q96JJ6 628 aa23.44■■□□□ 1.34
OTUB1-204ENST00000447683 PPP1R15AO75807 674 aaPredicted RBP23.43■■□□□ 1.34
OTUB1-204ENST00000447683 PLB1Q6P1J6 1458 aa23.43■■□□□ 1.34
OTUB1-204ENST00000447683 TROQ12816 1431 aaPredicted RBP23.42■■□□□ 1.34
OTUB1-204ENST00000447683 DNMT1P26358 1616 aaKnown RBP23.41■■□□□ 1.34
OTUB1-204ENST00000447683 RRP7BPQ9NSQ0 103 aa23.41■■□□□ 1.34
OTUB1-204ENST00000447683 ADCY10Q96PN6 1610 aa23.4■■□□□ 1.34
OTUB1-204ENST00000447683 CHIC2Q9UKJ5 165 aa23.39■■□□□ 1.33
OTUB1-204ENST00000447683 KDM6BO15054 1643 aa23.39■■□□□ 1.33
OTUB1-204ENST00000447683 DAPK1P53355 1430 aa23.38■■□□□ 1.33
OTUB1-204ENST00000447683 ROCK1Q13464 1354 aa23.38■■□□□ 1.33
OTUB1-204ENST00000447683 PRG4Q92954 1404 aaPredicted RBP23.37■■□□□ 1.33
OTUB1-204ENST00000447683 ITSN2Q9NZM3 1697 aa23.36■■□□□ 1.33
OTUB1-204ENST00000447683 YTHDC1Q96MU7 727 aaKnown RBP23.36■■□□□ 1.33
OTUB1-204ENST00000447683 ABCA8O94911 1581 aa23.36■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms