RNA–Protein interactions for RNA: ENST00000447345.5

RFC4-208, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 785 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-208ENST00000447345 RAPGEF2Q9Y4G8 1499 aa20.02■□□□□ 0.8
RFC4-208ENST00000447345 CTTNBP2Q8WZ74 1663 aa20.01■□□□□ 0.79
RFC4-208ENST00000447345 KIAA0586Q9BVV6 1533 aa19.97■□□□□ 0.79
RFC4-208ENST00000447345 IQGAP2Q13576 1575 aa19.96■□□□□ 0.79
RFC4-208ENST00000447345 FAM9AQ8IZU1 332 aaPredicted RBP19.96■□□□□ 0.79
RFC4-208ENST00000447345 EEA1Q15075 1411 aa19.95■□□□□ 0.78
RFC4-208ENST00000447345 PRXQ9BXM0 1461 aa19.94■□□□□ 0.78
RFC4-208ENST00000447345 CYB5RLQ6IPT4 315 aa19.93■□□□□ 0.78
RFC4-208ENST00000447345 PRG4Q92954 1404 aaPredicted RBP19.93■□□□□ 0.78
RFC4-208ENST00000447345 CSRNP3Q8WYN3 585 aa19.9■□□□□ 0.78
RFC4-208ENST00000447345 JPH4Q96JJ6 628 aa19.89■□□□□ 0.77
RFC4-208ENST00000447345 KIF21BO75037 1637 aa19.86■□□□□ 0.77
RFC4-208ENST00000447345 UGGT2Q9NYU1 1516 aa19.79■□□□□ 0.76
RFC4-208ENST00000447345 KIAA0556O60303 1618 aa19.78■□□□□ 0.76
RFC4-208ENST00000447345 DISP1Q96F81 1524 aa19.76■□□□□ 0.75
RFC4-208ENST00000447345 EHMT2Q96KQ7 1210 aa19.76■□□□□ 0.75
RFC4-208ENST00000447345 CARMIL2Q6F5E8 1435 aa19.76■□□□□ 0.75
RFC4-208ENST00000447345 TTBK1Q5TCY1 1321 aaPredicted RBP19.74■□□□□ 0.75
RFC4-208ENST00000447345 ADCY10Q96PN6 1610 aa19.7■□□□□ 0.74
RFC4-208ENST00000447345 GOLGA3Q08378 1498 aa19.7■□□□□ 0.74
RFC4-208ENST00000447345 TNIKQ9UKE5 1360 aa19.68■□□□□ 0.74
RFC4-208ENST00000447345 PTPRGP23470 1445 aa19.67■□□□□ 0.74
RFC4-208ENST00000447345 SAMD9Q5K651 1589 aa19.66■□□□□ 0.74
RFC4-208ENST00000447345 RANGAP1P46060 587 aaPredicted RBP19.64■□□□□ 0.73
RFC4-208ENST00000447345 UBTFP17480 764 aaKnown RBP19.61■□□□□ 0.73
RFC4-208ENST00000447345 P3H3Q8IVL6 736 aa19.58■□□□□ 0.72
RFC4-208ENST00000447345 ABCC2Q92887 1545 aa19.56■□□□□ 0.72
RFC4-208ENST00000447345 EFCAB5A4FU69 1503 aa19.55■□□□□ 0.72
RFC4-208ENST00000447345 UACAQ9BZF9 1416 aa19.54■□□□□ 0.72
RFC4-208ENST00000447345 TRHP20396 242 aaPredicted RBP19.54■□□□□ 0.72
RFC4-208ENST00000447345 PLB1Q6P1J6 1458 aa19.54■□□□□ 0.72
RFC4-208ENST00000447345 KIF13AQ9H1H9 1805 aa19.53■□□□□ 0.72
RFC4-208ENST00000447345 FHOD3Q2V2M9 1422 aa19.52■□□□□ 0.72
RFC4-208ENST00000447345 ZCCHC11Q5TAX3 1644 aaKnown RBP19.52■□□□□ 0.72
RFC4-208ENST00000447345 UHRF1BP1LA0JNW5 1464 aa19.52■□□□□ 0.72
RFC4-208ENST00000447345 ABCA8O94911 1581 aa19.52■□□□□ 0.71
RFC4-208ENST00000447345 MAPKBP1O60336 1514 aa19.51■□□□□ 0.71
RFC4-208ENST00000447345 NPM1P06748 294 aaKnown RBP eCLIP19.5■□□□□ 0.71
RFC4-208ENST00000447345 RAPGEF6Q8TEU7 1601 aa19.48■□□□□ 0.71
RFC4-208ENST00000447345 ARHGAP35Q9NRY4 1499 aa19.44■□□□□ 0.7
RFC4-208ENST00000447345 KDM5BQ9UGL1 1544 aa19.44■□□□□ 0.7
RFC4-208ENST00000447345 DIP2BQ9P265 1576 aa19.44■□□□□ 0.7
RFC4-208ENST00000447345 TSPOAP1O95153 1857 aa19.39■□□□□ 0.7
RFC4-208ENST00000447345 ARID3CA6NKF2 412 aa19.39■□□□□ 0.69
RFC4-208ENST00000447345 ASXL2Q76L83 1435 aa19.39■□□□□ 0.69
RFC4-208ENST00000447345 ABCC10Q5T3U5 1492 aa19.37■□□□□ 0.69
RFC4-208ENST00000447345 NUP153P49790 1475 aaKnown RBP19.35■□□□□ 0.69
RFC4-208ENST00000447345 CLIP1P30622 1438 aa19.34■□□□□ 0.69
RFC4-208ENST00000447345 HECW1Q76N89 1606 aa19.33■□□□□ 0.68
RFC4-208ENST00000447345 FAM69CQ0P6D2 419 aa19.32■□□□□ 0.68
RFC4-208ENST00000447345 LRRIQ1Q96JM4 1722 aa19.31■□□□□ 0.68
RFC4-208ENST00000447345 ATP10BO94823 1461 aa19.31■□□□□ 0.68
RFC4-208ENST00000447345 WDR7Q9Y4E6 1490 aa19.31■□□□□ 0.68
RFC4-208ENST00000447345 FMN1Q68DA7 1419 aa19.31■□□□□ 0.68
RFC4-208ENST00000447345 PCF11O94913 1555 aaKnown RBP19.31■□□□□ 0.68
RFC4-208ENST00000447345 LOC105371045A0A1W2PR82 267 aa19.29■□□□□ 0.68
RFC4-208ENST00000447345 EPRSP07814 1512 aaKnown RBP19.28■□□□□ 0.68
RFC4-208ENST00000447345 CEP162Q5TB80 1403 aa19.27■□□□□ 0.68
RFC4-208ENST00000447345 CDK13Q14004 1512 aaKnown RBP19.27■□□□□ 0.68
RFC4-208ENST00000447345 GLI2P10070 1586 aa19.27■□□□□ 0.67
RFC4-208ENST00000447345 MAP3K4Q9Y6R4 1608 aa19.26■□□□□ 0.67
RFC4-208ENST00000447345 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.26■□□□□ 0.67
RFC4-208ENST00000447345 HNRNPUL2Q1KMD3 747 aaKnown RBP19.26■□□□□ 0.67
RFC4-208ENST00000447345 PPRC1Q5VV67 1664 aaKnown RBP19.25■□□□□ 0.67
RFC4-208ENST00000447345 ATP1B4Q9UN42 357 aaPredicted RBP19.25■□□□□ 0.67
RFC4-208ENST00000447345 CFAP43Q8NDM7 1665 aa19.23■□□□□ 0.67
RFC4-208ENST00000447345 KCNH8Q96L42 1107 aa19.2■□□□□ 0.66
RFC4-208ENST00000447345 CASKIN1Q8WXD9 1431 aa19.17■□□□□ 0.66
RFC4-208ENST00000447345 FYCO1Q9BQS8 1478 aa19.17■□□□□ 0.66
RFC4-208ENST00000447345 ABCA9Q8IUA7 1624 aa19.16■□□□□ 0.66
RFC4-208ENST00000447345 KDM6BO15054 1643 aa19.13■□□□□ 0.65
RFC4-208ENST00000447345 CCDC18Q5T9S5 1454 aa19.12■□□□□ 0.65
RFC4-208ENST00000447345 TTC37Q6PGP7 1564 aa19.11■□□□□ 0.65
RFC4-208ENST00000447345 KIF14Q15058 1648 aa19.11■□□□□ 0.65
RFC4-208ENST00000447345 PLEKHD1A6NEE1 506 aa19.1■□□□□ 0.65
RFC4-208ENST00000447345 CD109Q6YHK3 1445 aa19.09■□□□□ 0.65
RFC4-208ENST00000447345 TEX14Q8IWB6 1497 aa19.09■□□□□ 0.65
RFC4-208ENST00000447345 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.08■□□□□ 0.64
RFC4-208ENST00000447345 MAGI3Q5TCQ9 1506 aa19.06■□□□□ 0.64
RFC4-208ENST00000447345 MYO5CQ9NQX4 1742 aa19.06■□□□□ 0.64
RFC4-208ENST00000447345 TROQ12816 1431 aaPredicted RBP19.03■□□□□ 0.64
RFC4-208ENST00000447345 VPS8Q8N3P4 1428 aa19.02■□□□□ 0.64
RFC4-208ENST00000447345 CDK11AQ9UQ88 783 aaPredicted RBP19.02■□□□□ 0.64
RFC4-208ENST00000447345 CFAP74Q9C0B2 1584 aa18.99■□□□□ 0.63
RFC4-208ENST00000447345 TIAM1Q13009 1591 aa18.96■□□□□ 0.63
RFC4-208ENST00000447345 CDC42BPAQ5VT25 1732 aa18.96■□□□□ 0.63
RFC4-208ENST00000447345 COL17A1Q9UMD9 1497 aaPredicted RBP18.96■□□□□ 0.63
RFC4-208ENST00000447345 CDC42BPBQ9Y5S2 1711 aa18.95■□□□□ 0.62
RFC4-208ENST00000447345 PREX2Q70Z35 1606 aa18.95■□□□□ 0.62
RFC4-208ENST00000447345 EHBP1L1Q8N3D4 1523 aa18.95■□□□□ 0.62
RFC4-208ENST00000447345 FANCAO15360 1455 aa18.93■□□□□ 0.62
RFC4-208ENST00000447345 NEO1Q92859 1461 aa18.92■□□□□ 0.62
RFC4-208ENST00000447345 ARHGAP5Q13017 1502 aa18.91■□□□□ 0.62
RFC4-208ENST00000447345 MTUS2Q5JR59 1369 aa18.91■□□□□ 0.62
RFC4-208ENST00000447345 PLCH2O75038 1416 aa18.89■□□□□ 0.61
RFC4-208ENST00000447345 ARAP3Q8WWN8 1544 aa18.89■□□□□ 0.61
RFC4-208ENST00000447345 RICTORQ6R327 1708 aa18.88■□□□□ 0.61
RFC4-208ENST00000447345 SUPT6HQ7KZ85 1726 aaKnown RBP18.88■□□□□ 0.61
RFC4-208ENST00000447345 FRMPD1Q5SYB0 1578 aa18.88■□□□□ 0.61
RFC4-208ENST00000447345 ITSN2Q9NZM3 1697 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms