RNA–Protein interactions for RNA: ENST00000446989.1

LINC01054-201, Transcript of long intergenic non-protein coding RNA 1054, humanhuman

TSL 3 BASIC

Gene LINC01054, Length 514 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01054-201ENST00000446989 NUP160Q12769 1436 aa16.11■□□□□ 0.17
LINC01054-201ENST00000446989 CARMIL1Q5VZK9 1371 aa16.05■□□□□ 0.16
LINC01054-201ENST00000446989 SHROOM2Q13796 1616 aa16.04■□□□□ 0.16
LINC01054-201ENST00000446989 ARAP1Q96P48 1450 aa16.02■□□□□ 0.15
LINC01054-201ENST00000446989 ERCC6L2Q5T890 1561 aa16■□□□□ 0.15
LINC01054-201ENST00000446989 RAPGEF2Q9Y4G8 1499 aa15.99■□□□□ 0.15
LINC01054-201ENST00000446989 CTTNBP2Q8WZ74 1663 aa15.97■□□□□ 0.15
LINC01054-201ENST00000446989 KIAA0586Q9BVV6 1533 aa15.95■□□□□ 0.14
LINC01054-201ENST00000446989 CYB5RLQ6IPT4 315 aa15.94■□□□□ 0.14
LINC01054-201ENST00000446989 IQGAP2Q13576 1575 aa15.94■□□□□ 0.14
LINC01054-201ENST00000446989 EEA1Q15075 1411 aa15.93■□□□□ 0.14
LINC01054-201ENST00000446989 PRG4Q92954 1404 aaPredicted RBP15.93■□□□□ 0.14
LINC01054-201ENST00000446989 FAM9AQ8IZU1 332 aaPredicted RBP15.92■□□□□ 0.14
LINC01054-201ENST00000446989 PRXQ9BXM0 1461 aa15.91■□□□□ 0.14
LINC01054-201ENST00000446989 JPH4Q96JJ6 628 aa15.9■□□□□ 0.14
LINC01054-201ENST00000446989 CSRNP3Q8WYN3 585 aa15.88■□□□□ 0.13
LINC01054-201ENST00000446989 KIF21BO75037 1637 aa15.83■□□□□ 0.13
LINC01054-201ENST00000446989 KIAA0556O60303 1618 aa15.8■□□□□ 0.12
LINC01054-201ENST00000446989 UGGT2Q9NYU1 1516 aa15.8■□□□□ 0.12
LINC01054-201ENST00000446989 CARMIL2Q6F5E8 1435 aa15.79■□□□□ 0.12
LINC01054-201ENST00000446989 DISP1Q96F81 1524 aa15.78■□□□□ 0.12
LINC01054-201ENST00000446989 TTBK1Q5TCY1 1321 aaPredicted RBP15.76■□□□□ 0.11
LINC01054-201ENST00000446989 EHMT2Q96KQ7 1210 aa15.76■□□□□ 0.11
LINC01054-201ENST00000446989 ADCY10Q96PN6 1610 aa15.74■□□□□ 0.11
LINC01054-201ENST00000446989 MSH5O43196 834 aa15.73■□□□□ 0.11
LINC01054-201ENST00000446989 TNIKQ9UKE5 1360 aa15.73■□□□□ 0.11
LINC01054-201ENST00000446989 GOLGA3Q08378 1498 aa15.71■□□□□ 0.11
LINC01054-201ENST00000446989 PTPRGP23470 1445 aa15.71■□□□□ 0.11
LINC01054-201ENST00000446989 SAMD9Q5K651 1589 aa15.69■□□□□ 0.1
LINC01054-201ENST00000446989 RANGAP1P46060 587 aaPredicted RBP15.67■□□□□ 0.1
LINC01054-201ENST00000446989 UBTFP17480 764 aaKnown RBP15.65■□□□□ 0.1
LINC01054-201ENST00000446989 TRHP20396 242 aaPredicted RBP15.65■□□□□ 0.1
LINC01054-201ENST00000446989 P3H3Q8IVL6 736 aa15.63■□□□□ 0.09
LINC01054-201ENST00000446989 ABCC2Q92887 1545 aa15.63■□□□□ 0.09
LINC01054-201ENST00000446989 KIF13AQ9H1H9 1805 aa15.61■□□□□ 0.09
LINC01054-201ENST00000446989 UACAQ9BZF9 1416 aa15.61■□□□□ 0.09
LINC01054-201ENST00000446989 PLB1Q6P1J6 1458 aa15.6■□□□□ 0.09
LINC01054-201ENST00000446989 EFCAB5A4FU69 1503 aa15.6■□□□□ 0.09
LINC01054-201ENST00000446989 NPM1P06748 294 aaKnown RBP eCLIP15.6■□□□□ 0.09
LINC01054-201ENST00000446989 ZCCHC11Q5TAX3 1644 aaKnown RBP15.6■□□□□ 0.09
LINC01054-201ENST00000446989 UHRF1BP1LA0JNW5 1464 aa15.59■□□□□ 0.09
LINC01054-201ENST00000446989 MAPKBP1O60336 1514 aa15.59■□□□□ 0.09
LINC01054-201ENST00000446989 ABCA8O94911 1581 aa15.58■□□□□ 0.09
LINC01054-201ENST00000446989 FHOD3Q2V2M9 1422 aa15.58■□□□□ 0.08
LINC01054-201ENST00000446989 RAPGEF6Q8TEU7 1601 aa15.55■□□□□ 0.08
LINC01054-201ENST00000446989 DIP2BQ9P265 1576 aa15.54■□□□□ 0.08
LINC01054-201ENST00000446989 KDM5BQ9UGL1 1544 aa15.53■□□□□ 0.08
LINC01054-201ENST00000446989 ARHGAP35Q9NRY4 1499 aa15.52■□□□□ 0.07
LINC01054-201ENST00000446989 TSPOAP1O95153 1857 aa15.5■□□□□ 0.07
LINC01054-201ENST00000446989 ABCC10Q5T3U5 1492 aa15.5■□□□□ 0.07
LINC01054-201ENST00000446989 ASXL2Q76L83 1435 aa15.5■□□□□ 0.07
LINC01054-201ENST00000446989 ARID3CA6NKF2 412 aa15.47■□□□□ 0.07
LINC01054-201ENST00000446989 FAM69CQ0P6D2 419 aa15.45■□□□□ 0.06
LINC01054-201ENST00000446989 NUP153P49790 1475 aaKnown RBP15.44■□□□□ 0.06
LINC01054-201ENST00000446989 WDR7Q9Y4E6 1490 aa15.44■□□□□ 0.06
LINC01054-201ENST00000446989 HECW1Q76N89 1606 aa15.43■□□□□ 0.06
LINC01054-201ENST00000446989 CLIP1P30622 1438 aa15.43■□□□□ 0.06
LINC01054-201ENST00000446989 FMN1Q68DA7 1419 aa15.42■□□□□ 0.06
LINC01054-201ENST00000446989 ATP10BO94823 1461 aa15.41■□□□□ 0.06
LINC01054-201ENST00000446989 EPRSP07814 1512 aaKnown RBP15.41■□□□□ 0.06
LINC01054-201ENST00000446989 PCF11O94913 1555 aaKnown RBP15.41■□□□□ 0.06
LINC01054-201ENST00000446989 LRRIQ1Q96JM4 1722 aa15.4■□□□□ 0.06
LINC01054-201ENST00000446989 GLI2P10070 1586 aa15.4■□□□□ 0.06
LINC01054-201ENST00000446989 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.39■□□□□ 0.05
LINC01054-201ENST00000446989 HNRNPUL2Q1KMD3 747 aaKnown RBP15.39■□□□□ 0.05
LINC01054-201ENST00000446989 MAP3K4Q9Y6R4 1608 aa15.39■□□□□ 0.05
LINC01054-201ENST00000446989 PPRC1Q5VV67 1664 aaKnown RBP15.38■□□□□ 0.05
LINC01054-201ENST00000446989 CDK13Q14004 1512 aaKnown RBP15.38■□□□□ 0.05
LINC01054-201ENST00000446989 CEP162Q5TB80 1403 aa15.37■□□□□ 0.05
LINC01054-201ENST00000446989 LOC105371045A0A1W2PR82 267 aa15.37■□□□□ 0.05
LINC01054-201ENST00000446989 ATP1B4Q9UN42 357 aaPredicted RBP15.37■□□□□ 0.05
LINC01054-201ENST00000446989 CFAP43Q8NDM7 1665 aa15.36■□□□□ 0.05
LINC01054-201ENST00000446989 KCNH8Q96L42 1107 aa15.34■□□□□ 0.05
LINC01054-201ENST00000446989 ABCA9Q8IUA7 1624 aa15.31■□□□□ 0.04
LINC01054-201ENST00000446989 KDM6BO15054 1643 aa15.3■□□□□ 0.04
LINC01054-201ENST00000446989 FYCO1Q9BQS8 1478 aa15.3■□□□□ 0.04
LINC01054-201ENST00000446989 CASKIN1Q8WXD9 1431 aa15.29■□□□□ 0.04
LINC01054-201ENST00000446989 TEX14Q8IWB6 1497 aa15.27■□□□□ 0.03
LINC01054-201ENST00000446989 CD109Q6YHK3 1445 aa15.26■□□□□ 0.03
LINC01054-201ENST00000446989 PLEKHD1A6NEE1 506 aa15.26■□□□□ 0.03
LINC01054-201ENST00000446989 TTC37Q6PGP7 1564 aa15.26■□□□□ 0.03
LINC01054-201ENST00000446989 CCDC18Q5T9S5 1454 aa15.26■□□□□ 0.03
LINC01054-201ENST00000446989 KIF14Q15058 1648 aa15.25■□□□□ 0.03
LINC01054-201ENST00000446989 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.23■□□□□ 0.03
LINC01054-201ENST00000446989 PIAS4Q8N2W9 510 aaPredicted RBP15.23■□□□□ 0.03
LINC01054-201ENST00000446989 MAGI3Q5TCQ9 1506 aa15.22■□□□□ 0.03
LINC01054-201ENST00000446989 MYO5CQ9NQX4 1742 aa15.22■□□□□ 0.03
LINC01054-201ENST00000446989 CDK11AQ9UQ88 783 aaPredicted RBP15.2■□□□□ 0.02
LINC01054-201ENST00000446989 TROQ12816 1431 aaPredicted RBP15.19■□□□□ 0.02
LINC01054-201ENST00000446989 CFAP74Q9C0B2 1584 aa15.17■□□□□ 0.02
LINC01054-201ENST00000446989 VPS8Q8N3P4 1428 aa15.17■□□□□ 0.02
LINC01054-201ENST00000446989 COL17A1Q9UMD9 1497 aaPredicted RBP15.15■□□□□ 0.02
LINC01054-201ENST00000446989 CDC42BPAQ5VT25 1732 aa15.13■□□□□ 0.01
LINC01054-201ENST00000446989 CDC42BPBQ9Y5S2 1711 aa15.13■□□□□ 0.01
LINC01054-201ENST00000446989 FANCAO15360 1455 aa15.13■□□□□ 0.01
LINC01054-201ENST00000446989 NEO1Q92859 1461 aa15.13■□□□□ 0.01
LINC01054-201ENST00000446989 PREX2Q70Z35 1606 aa15.12■□□□□ 0.01
LINC01054-201ENST00000446989 EHBP1L1Q8N3D4 1523 aa15.12■□□□□ 0.01
LINC01054-201ENST00000446989 TIAM1Q13009 1591 aa15.11■□□□□ 0.01
LINC01054-201ENST00000446989 MTUS2Q5JR59 1369 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms