RNA–Protein interactions for RNA: ENST00000446987.5

DDX56-206, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-206ENST00000446987 RIMBP3Q9UFD9 1639 aa20.71■□□□□ 0.91
DDX56-206ENST00000446987 PCGF6Q9BYE7 350 aa20.7■□□□□ 0.9
DDX56-206ENST00000446987 SHROOM2Q13796 1616 aa20.7■□□□□ 0.9
DDX56-206ENST00000446987 ARHGEF11O15085 1522 aa20.69■□□□□ 0.9
DDX56-206ENST00000446987 EEA1Q15075 1411 aa20.69■□□□□ 0.9
DDX56-206ENST00000446987 RAPGEF2Q9Y4G8 1499 aa20.68■□□□□ 0.9
DDX56-206ENST00000446987 SCAF1Q9H7N4 1312 aaKnown RBP20.68■□□□□ 0.9
DDX56-206ENST00000446987 ERCC6L2Q5T890 1561 aa20.62■□□□□ 0.89
DDX56-206ENST00000446987 KIAA0586Q9BVV6 1533 aa20.61■□□□□ 0.89
DDX56-206ENST00000446987 CSRNP3Q8WYN3 585 aa20.6■□□□□ 0.89
DDX56-206ENST00000446987 CTTNBP2Q8WZ74 1663 aa20.59■□□□□ 0.89
DDX56-206ENST00000446987 TTBK1Q5TCY1 1321 aaPredicted RBP20.58■□□□□ 0.88
DDX56-206ENST00000446987 KIF21BO75037 1637 aa20.58■□□□□ 0.88
DDX56-206ENST00000446987 ARAP1Q96P48 1450 aa20.57■□□□□ 0.88
DDX56-206ENST00000446987 IQGAP2Q13576 1575 aa20.56■□□□□ 0.88
DDX56-206ENST00000446987 FAM9AQ8IZU1 332 aaPredicted RBP20.56■□□□□ 0.88
DDX56-206ENST00000446987 ZEB1P37275 1124 aaPredicted RBP20.52■□□□□ 0.87
DDX56-206ENST00000446987 PRG4Q92954 1404 aaPredicted RBP20.49■□□□□ 0.87
DDX56-206ENST00000446987 JPH4Q96JJ6 628 aa20.47■□□□□ 0.87
DDX56-206ENST00000446987 UGGT2Q9NYU1 1516 aa20.46■□□□□ 0.87
DDX56-206ENST00000446987 DISP1Q96F81 1524 aa20.43■□□□□ 0.86
DDX56-206ENST00000446987 GOLGA3Q08378 1498 aa20.4■□□□□ 0.86
DDX56-206ENST00000446987 KIAA0556O60303 1618 aa20.39■□□□□ 0.85
DDX56-206ENST00000446987 CYB5RLQ6IPT4 315 aa20.35■□□□□ 0.85
DDX56-206ENST00000446987 SAMD9Q5K651 1589 aa20.33■□□□□ 0.85
DDX56-206ENST00000446987 CARMIL2Q6F5E8 1435 aa20.3■□□□□ 0.84
DDX56-206ENST00000446987 EHMT2Q96KQ7 1210 aa20.27■□□□□ 0.84
DDX56-206ENST00000446987 TNIKQ9UKE5 1360 aa20.27■□□□□ 0.83
DDX56-206ENST00000446987 TRIM26Q12899 539 aaPredicted RBP20.26■□□□□ 0.83
DDX56-206ENST00000446987 ADCY10Q96PN6 1610 aa20.26■□□□□ 0.83
DDX56-206ENST00000446987 PTPRGP23470 1445 aa20.22■□□□□ 0.83
DDX56-206ENST00000446987 EFCAB5A4FU69 1503 aa20.2■□□□□ 0.82
DDX56-206ENST00000446987 UBTFP17480 764 aaKnown RBP20.19■□□□□ 0.82
DDX56-206ENST00000446987 ACIN1Q9UKV3 1341 aaKnown RBP20.18■□□□□ 0.82
DDX56-206ENST00000446987 ARHGAP35Q9NRY4 1499 aa20.16■□□□□ 0.82
DDX56-206ENST00000446987 ABCA8O94911 1581 aa20.16■□□□□ 0.82
DDX56-206ENST00000446987 FHOD3Q2V2M9 1422 aa20.15■□□□□ 0.82
DDX56-206ENST00000446987 ABCC2Q92887 1545 aa20.15■□□□□ 0.82
DDX56-206ENST00000446987 UHRF1BP1LA0JNW5 1464 aa20.14■□□□□ 0.82
DDX56-206ENST00000446987 PLB1Q6P1J6 1458 aa20.14■□□□□ 0.81
DDX56-206ENST00000446987 UACAQ9BZF9 1416 aa20.13■□□□□ 0.81
DDX56-206ENST00000446987 RANGAP1P46060 587 aaPredicted RBP20.11■□□□□ 0.81
DDX56-206ENST00000446987 P3H3Q8IVL6 736 aa20.11■□□□□ 0.81
DDX56-206ENST00000446987 KDM5BQ9UGL1 1544 aa20.06■□□□□ 0.8
DDX56-206ENST00000446987 ZCCHC11Q5TAX3 1644 aaKnown RBP20.06■□□□□ 0.8
DDX56-206ENST00000446987 RAPGEF6Q8TEU7 1601 aa20.06■□□□□ 0.8
DDX56-206ENST00000446987 MAPKBP1O60336 1514 aa20.06■□□□□ 0.8
DDX56-206ENST00000446987 LOC105371045A0A1W2PR82 267 aa20.05■□□□□ 0.8
DDX56-206ENST00000446987 CLIP1P30622 1438 aa20.01■□□□□ 0.79
DDX56-206ENST00000446987 CEP162Q5TB80 1403 aa20■□□□□ 0.79
DDX56-206ENST00000446987 NUP153P49790 1475 aaKnown RBP20■□□□□ 0.79
DDX56-206ENST00000446987 KIF13AQ9H1H9 1805 aa19.99■□□□□ 0.79
DDX56-206ENST00000446987 DIP2BQ9P265 1576 aa19.95■□□□□ 0.78
DDX56-206ENST00000446987 LRRIQ1Q96JM4 1722 aa19.95■□□□□ 0.78
DDX56-206ENST00000446987 PCF11O94913 1555 aaKnown RBP19.95■□□□□ 0.78
DDX56-206ENST00000446987 ATP10BO94823 1461 aa19.94■□□□□ 0.78
DDX56-206ENST00000446987 FMN1Q68DA7 1419 aa19.94■□□□□ 0.78
DDX56-206ENST00000446987 ASXL2Q76L83 1435 aa19.93■□□□□ 0.78
DDX56-206ENST00000446987 CENPBP07199 599 aaPredicted RBP19.93■□□□□ 0.78
DDX56-206ENST00000446987 ABCC10Q5T3U5 1492 aa19.91■□□□□ 0.78
DDX56-206ENST00000446987 HECW1Q76N89 1606 aa19.91■□□□□ 0.78
DDX56-206ENST00000446987 NEUROD1Q13562 356 aa19.9■□□□□ 0.78
DDX56-206ENST00000446987 NPM1P06748 294 aaKnown RBP eCLIP19.89■□□□□ 0.77
DDX56-206ENST00000446987 CDK13Q14004 1512 aaKnown RBP19.88■□□□□ 0.77
DDX56-206ENST00000446987 WDR7Q9Y4E6 1490 aa19.87■□□□□ 0.77
DDX56-206ENST00000446987 ARID3CA6NKF2 412 aa19.86■□□□□ 0.77
DDX56-206ENST00000446987 CASKIN1Q8WXD9 1431 aa19.85■□□□□ 0.77
DDX56-206ENST00000446987 GTF3C3Q9Y5Q9 886 aa19.85■□□□□ 0.77
DDX56-206ENST00000446987 EPRSP07814 1512 aaKnown RBP19.84■□□□□ 0.77
DDX56-206ENST00000446987 GLI2P10070 1586 aa19.83■□□□□ 0.77
DDX56-206ENST00000446987 FYCO1Q9BQS8 1478 aa19.83■□□□□ 0.77
DDX56-206ENST00000446987 TRHP20396 242 aaPredicted RBP19.82■□□□□ 0.76
DDX56-206ENST00000446987 PPRC1Q5VV67 1664 aaKnown RBP19.8■□□□□ 0.76
DDX56-206ENST00000446987 MAP3K4Q9Y6R4 1608 aa19.79■□□□□ 0.76
DDX56-206ENST00000446987 MAGI3Q5TCQ9 1506 aa19.75■□□□□ 0.75
DDX56-206ENST00000446987 FAM69CQ0P6D2 419 aa19.75■□□□□ 0.75
DDX56-206ENST00000446987 TSPOAP1O95153 1857 aa19.74■□□□□ 0.75
DDX56-206ENST00000446987 VPS8Q8N3P4 1428 aa19.74■□□□□ 0.75
DDX56-206ENST00000446987 CCDC18Q5T9S5 1454 aa19.74■□□□□ 0.75
DDX56-206ENST00000446987 ABCA9Q8IUA7 1624 aa19.74■□□□□ 0.75
DDX56-206ENST00000446987 CFAP43Q8NDM7 1665 aa19.73■□□□□ 0.75
DDX56-206ENST00000446987 KIF14Q15058 1648 aa19.69■□□□□ 0.74
DDX56-206ENST00000446987 TTC37Q6PGP7 1564 aa19.69■□□□□ 0.74
DDX56-206ENST00000446987 ATP1B4Q9UN42 357 aaPredicted RBP19.69■□□□□ 0.74
DDX56-206ENST00000446987 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.68■□□□□ 0.74
DDX56-206ENST00000446987 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.67■□□□□ 0.74
DDX56-206ENST00000446987 HNRNPUL2Q1KMD3 747 aaKnown RBP19.67■□□□□ 0.74
DDX56-206ENST00000446987 TROQ12816 1431 aaPredicted RBP19.66■□□□□ 0.74
DDX56-206ENST00000446987 KCNH8Q96L42 1107 aa19.65■□□□□ 0.74
DDX56-206ENST00000446987 TIAM1Q13009 1591 aa19.63■□□□□ 0.73
DDX56-206ENST00000446987 PLEKHD1A6NEE1 506 aa19.62■□□□□ 0.73
DDX56-206ENST00000446987 CD109Q6YHK3 1445 aa19.61■□□□□ 0.73
DDX56-206ENST00000446987 EHBP1L1Q8N3D4 1523 aa19.57■□□□□ 0.72
DDX56-206ENST00000446987 BCL11AQ9H165 835 aa19.56■□□□□ 0.72
DDX56-206ENST00000446987 MAP3K1Q13233 1512 aa19.56■□□□□ 0.72
DDX56-206ENST00000446987 MYO5CQ9NQX4 1742 aa19.56■□□□□ 0.72
DDX56-206ENST00000446987 TEX14Q8IWB6 1497 aa19.56■□□□□ 0.72
DDX56-206ENST00000446987 CDK11AQ9UQ88 783 aaPredicted RBP19.54■□□□□ 0.72
DDX56-206ENST00000446987 COL17A1Q9UMD9 1497 aaPredicted RBP19.54■□□□□ 0.72
DDX56-206ENST00000446987 CDC42BPAQ5VT25 1732 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms