RNA–Protein interactions for RNA: ENST00000446803.6

TBC1D1-209, Transcript of TBC1 domain family member 1, humanhuman

TSL 2

Gene TBC1D1, Length 1,987 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D1-209ENST00000446803 GRIN2AQ12879 1464 aa36.79■■■■□ 3.48
TBC1D1-209ENST00000446803 CHMP7Q8WUX9 453 aaPredicted RBP36.78■■■■□ 3.48
TBC1D1-209ENST00000446803 ARAP1Q96P48 1450 aa36.76■■■■□ 3.47
TBC1D1-209ENST00000446803 FBLN2P98095 1184 aa36.75■■■■□ 3.47
TBC1D1-209ENST00000446803 VPS8Q8N3P4 1428 aa36.72■■■■□ 3.47
TBC1D1-209ENST00000446803 IQGAP2Q13576 1575 aa36.64■■■■□ 3.46
TBC1D1-209ENST00000446803 EFCAB5A4FU69 1503 aa36.62■■■■□ 3.45
TBC1D1-209ENST00000446803 P3H3Q8IVL6 736 aa36.61■■■■□ 3.45
TBC1D1-209ENST00000446803 CEP170Q5SW79 1584 aa36.58■■■■□ 3.45
TBC1D1-209ENST00000446803 PPARGC1BQ86YN6 1023 aaKnown RBP36.57■■■■□ 3.45
TBC1D1-209ENST00000446803 KIAA0586Q9BVV6 1533 aa36.57■■■■□ 3.44
TBC1D1-209ENST00000446803 CHD1O14646 1710 aa36.54■■■■□ 3.44
TBC1D1-209ENST00000446803 SAMD9Q5K651 1589 aa36.53■■■■□ 3.44
TBC1D1-209ENST00000446803 FHOD3Q2V2M9 1422 aa36.51■■■■□ 3.44
TBC1D1-209ENST00000446803 NUP160Q12769 1436 aa36.5■■■■□ 3.43
TBC1D1-209ENST00000446803 UGGT2Q9NYU1 1516 aa36.43■■■■□ 3.42
TBC1D1-209ENST00000446803 APLP2Q06481 763 aa36.42■■■■□ 3.42
TBC1D1-209ENST00000446803 TTBK1Q5TCY1 1321 aaPredicted RBP36.35■■■■□ 3.41
TBC1D1-209ENST00000446803 TRIM26Q12899 539 aaPredicted RBP36.32■■■■□ 3.4
TBC1D1-209ENST00000446803 FMN1Q68DA7 1419 aa36.31■■■■□ 3.4
TBC1D1-209ENST00000446803 PCGF6Q9BYE7 350 aa36.3■■■■□ 3.4
TBC1D1-209ENST00000446803 PCF11O94913 1555 aaKnown RBP36.29■■■■□ 3.4
TBC1D1-209ENST00000446803 DISP1Q96F81 1524 aa36.28■■■■□ 3.4
TBC1D1-209ENST00000446803 JPH4Q96JJ6 628 aa36.27■■■■□ 3.4
TBC1D1-209ENST00000446803 KIAA0556O60303 1618 aa36.27■■■■□ 3.4
TBC1D1-209ENST00000446803 ATP1B4Q9UN42 357 aaPredicted RBP36.22■■■■□ 3.39
TBC1D1-209ENST00000446803 CASKIN1Q8WXD9 1431 aa36.2■■■■□ 3.39
TBC1D1-209ENST00000446803 FYCO1Q9BQS8 1478 aa36.19■■■■□ 3.38
TBC1D1-209ENST00000446803 CARMIL2Q6F5E8 1435 aa36.14■■■■□ 3.38
TBC1D1-209ENST00000446803 TIAM1Q13009 1591 aa36.11■■■■□ 3.37
TBC1D1-209ENST00000446803 KANK4Q5T7N3 995 aaPredicted RBP36.1■■■■□ 3.37
TBC1D1-209ENST00000446803 MAP3K1Q13233 1512 aa36.08■■■■□ 3.37
TBC1D1-209ENST00000446803 PRG4Q92954 1404 aaPredicted RBP36.05■■■■□ 3.36
TBC1D1-209ENST00000446803 CFAP43Q8NDM7 1665 aa36.04■■■■□ 3.36
TBC1D1-209ENST00000446803 SHROOM2Q13796 1616 aa36.04■■■■□ 3.36
TBC1D1-209ENST00000446803 CLASP1Q7Z460 1538 aa36.04■■■■□ 3.36
TBC1D1-209ENST00000446803 LRRIQ1Q96JM4 1722 aa36.01■■■■□ 3.36
TBC1D1-209ENST00000446803 HECW1Q76N89 1606 aa35.97■■■■□ 3.35
TBC1D1-209ENST00000446803 LRRC9Q6ZRR7 1453 aa35.93■■■■□ 3.34
TBC1D1-209ENST00000446803 RAPGEF6Q8TEU7 1601 aa35.91■■■■□ 3.34
TBC1D1-209ENST00000446803 CCDC18Q5T9S5 1454 aa35.86■■■■□ 3.33
TBC1D1-209ENST00000446803 ERCC6L2Q5T890 1561 aa35.85■■■■□ 3.33
TBC1D1-209ENST00000446803 PLB1Q6P1J6 1458 aa35.84■■■■□ 3.33
TBC1D1-209ENST00000446803 EPRSP07814 1512 aaKnown RBP35.84■■■■□ 3.33
TBC1D1-209ENST00000446803 OSCARQ8IYS5 282 aa35.84■■■■□ 3.33
TBC1D1-209ENST00000446803 ARID3CA6NKF2 412 aa35.81■■■■□ 3.32
TBC1D1-209ENST00000446803 PTPRGP23470 1445 aa35.81■■■■□ 3.32
TBC1D1-209ENST00000446803 NUP153P49790 1475 aaKnown RBP35.79■■■■□ 3.32
TBC1D1-209ENST00000446803 CDK13Q14004 1512 aaKnown RBP35.78■■■■□ 3.32
TBC1D1-209ENST00000446803 MTUS2Q5JR59 1369 aa35.76■■■■□ 3.31
TBC1D1-209ENST00000446803 ABCA8O94911 1581 aa35.74■■■■□ 3.31
TBC1D1-209ENST00000446803 MAGI3Q5TCQ9 1506 aa35.67■■■■□ 3.3
TBC1D1-209ENST00000446803 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP35.67■■■■□ 3.3
TBC1D1-209ENST00000446803 HNRNPUL2Q1KMD3 747 aaKnown RBP35.67■■■■□ 3.3
TBC1D1-209ENST00000446803 EHBP1L1Q8N3D4 1523 aa35.67■■■■□ 3.3
TBC1D1-209ENST00000446803 PHLDB1Q86UU1 1377 aa35.61■■■■□ 3.29
TBC1D1-209ENST00000446803 SUPT6HQ7KZ85 1726 aaKnown RBP35.6■■■■□ 3.29
TBC1D1-209ENST00000446803 UACAQ9BZF9 1416 aa35.59■■■■□ 3.29
TBC1D1-209ENST00000446803 RRBP1Q9P2E9 1410 aaKnown RBP35.58■■■■□ 3.29
TBC1D1-209ENST00000446803 CDK11AQ9UQ88 783 aaPredicted RBP35.55■■■■□ 3.28
TBC1D1-209ENST00000446803 NCOA2Q15596 1464 aa35.53■■■■□ 3.28
TBC1D1-209ENST00000446803 ATP10BO94823 1461 aa35.52■■■■□ 3.28
TBC1D1-209ENST00000446803 CCNB3Q8WWL7 1395 aa35.51■■■■□ 3.28
TBC1D1-209ENST00000446803 ABCC2Q92887 1545 aa35.48■■■■□ 3.27
TBC1D1-209ENST00000446803 ARHGEF11O15085 1522 aa35.43■■■■□ 3.26
TBC1D1-209ENST00000446803 TROQ12816 1431 aaPredicted RBP35.41■■■■□ 3.26
TBC1D1-209ENST00000446803 PLEKHD1A6NEE1 506 aa35.38■■■■□ 3.25
TBC1D1-209ENST00000446803 MYOM3Q5VTT5 1437 aa35.37■■■■□ 3.25
TBC1D1-209ENST00000446803 UHRF1BP1LA0JNW5 1464 aa35.37■■■■□ 3.25
TBC1D1-209ENST00000446803 FGD6Q6ZV73 1430 aa35.36■■■■□ 3.25
TBC1D1-209ENST00000446803 FAM50AQ14320 339 aaKnown RBP35.35■■■■□ 3.25
TBC1D1-209ENST00000446803 ADCY10Q96PN6 1610 aa35.31■■■■□ 3.24
TBC1D1-209ENST00000446803 KIF14Q15058 1648 aa35.29■■■■□ 3.24
TBC1D1-209ENST00000446803 ITGAEP38570 1179 aa35.29■■■■□ 3.24
TBC1D1-209ENST00000446803 ZCCHC11Q5TAX3 1644 aaKnown RBP35.27■■■■□ 3.24
TBC1D1-209ENST00000446803 KDM5BQ9UGL1 1544 aa35.25■■■■□ 3.23
TBC1D1-209ENST00000446803 PTPN23Q9H3S7 1636 aa35.22■■■■□ 3.23
TBC1D1-209ENST00000446803 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP35.22■■■■□ 3.23
TBC1D1-209ENST00000446803 MIA2Q96PC5 1412 aa35.17■■■■□ 3.22
TBC1D1-209ENST00000446803 ITSN2Q9NZM3 1697 aa35.14■■■■□ 3.22
TBC1D1-209ENST00000446803 TCOF1Q13428 1488 aaKnown RBP35.11■■■■□ 3.21
TBC1D1-209ENST00000446803 ABCC10Q5T3U5 1492 aa35.11■■■■□ 3.21
TBC1D1-209ENST00000446803 GPATCH8Q9UKJ3 1502 aaKnown RBP35.1■■■■□ 3.21
TBC1D1-209ENST00000446803 RIMBP3CA6NJZ7 1639 aa35.08■■■■□ 3.21
TBC1D1-209ENST00000446803 RIMBP3BA6NNM3 1639 aa35.08■■■■□ 3.21
TBC1D1-209ENST00000446803 RIMBP3Q9UFD9 1639 aa35.08■■■■□ 3.21
TBC1D1-209ENST00000446803 CDC42BPAQ5VT25 1732 aa35.08■■■■□ 3.21
TBC1D1-209ENST00000446803 KCNH8Q96L42 1107 aa35.05■■■■□ 3.2
TBC1D1-209ENST00000446803 CFDP1Q9UEE9 299 aaPredicted RBP35.05■■■■□ 3.2
TBC1D1-209ENST00000446803 HRCP23327 699 aa35.02■■■■□ 3.2
TBC1D1-209ENST00000446803 NPM1P06748 294 aaKnown RBP eCLIP35■■■■□ 3.19
TBC1D1-209ENST00000446803 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP34.99■■■■□ 3.19
TBC1D1-209ENST00000446803 ZNF644Q9H582 1327 aaPredicted RBP34.99■■■■□ 3.19
TBC1D1-209ENST00000446803 TTC37Q6PGP7 1564 aa34.98■■■■□ 3.19
TBC1D1-209ENST00000446803 CYB5RLQ6IPT4 315 aa34.96■■■■□ 3.19
TBC1D1-209ENST00000446803 CCER1Q8TC90 406 aaPredicted RBP34.96■■■■□ 3.19
TBC1D1-209ENST00000446803 ZNF777Q9ULD5 760 aaPredicted RBP34.96■■■■□ 3.19
TBC1D1-209ENST00000446803 PTPRKQ15262 1439 aa34.95■■■■□ 3.18
TBC1D1-209ENST00000446803 WDR7Q9Y4E6 1490 aa34.94■■■■□ 3.18
TBC1D1-209ENST00000446803 CAMSAP2Q08AD1 1489 aa34.93■■■■□ 3.18
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms