RNA–Protein interactions for RNA: ENST00000445371.1

SDHCP3-201, Transcript of succinate dehydrogenase complex subunit C pseudogene 3, humanhuman

BASIC

Gene SDHCP3, Length 506 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHCP3-201ENST00000445371 GRIN2AQ12879 1464 aa11.19□□□□□ -0.62
SDHCP3-201ENST00000445371 CLIP1P30622 1438 aa11.18□□□□□ -0.62
SDHCP3-201ENST00000445371 KIAA0586Q9BVV6 1533 aa11.12□□□□□ -0.63
SDHCP3-201ENST00000445371 P3H3Q8IVL6 736 aa11.11□□□□□ -0.63
SDHCP3-201ENST00000445371 AEBP2Q6ZN18 517 aaPredicted RBP11.1□□□□□ -0.63
SDHCP3-201ENST00000445371 NUP160Q12769 1436 aa11.09□□□□□ -0.63
SDHCP3-201ENST00000445371 IQGAP2Q13576 1575 aa11.09□□□□□ -0.63
SDHCP3-201ENST00000445371 APLP2Q06481 763 aa11.08□□□□□ -0.64
SDHCP3-201ENST00000445371 EFCAB5A4FU69 1503 aa11.08□□□□□ -0.64
SDHCP3-201ENST00000445371 JPH4Q96JJ6 628 aa11.07□□□□□ -0.64
SDHCP3-201ENST00000445371 CTTNBP2Q8WZ74 1663 aa11.07□□□□□ -0.64
SDHCP3-201ENST00000445371 CEP170Q5SW79 1584 aa11.07□□□□□ -0.64
SDHCP3-201ENST00000445371 ARHGAP35Q9NRY4 1499 aa11.06□□□□□ -0.64
SDHCP3-201ENST00000445371 OSCARQ8IYS5 282 aa11.06□□□□□ -0.64
SDHCP3-201ENST00000445371 CARMIL2Q6F5E8 1435 aa11.06□□□□□ -0.64
SDHCP3-201ENST00000445371 VPS8Q8N3P4 1428 aa11.05□□□□□ -0.64
SDHCP3-201ENST00000445371 ATP1B4Q9UN42 357 aaPredicted RBP11.05□□□□□ -0.64
SDHCP3-201ENST00000445371 FHOD3Q2V2M9 1422 aa11.04□□□□□ -0.64
SDHCP3-201ENST00000445371 ARAP1Q96P48 1450 aa11.04□□□□□ -0.64
SDHCP3-201ENST00000445371 TTBK1Q5TCY1 1321 aaPredicted RBP11.04□□□□□ -0.64
SDHCP3-201ENST00000445371 UGGT2Q9NYU1 1516 aa11.03□□□□□ -0.64
SDHCP3-201ENST00000445371 FMN1Q68DA7 1419 aa11.02□□□□□ -0.64
SDHCP3-201ENST00000445371 CHD1O14646 1710 aa11.01□□□□□ -0.65
SDHCP3-201ENST00000445371 PRG4Q92954 1404 aaPredicted RBP11.01□□□□□ -0.65
SDHCP3-201ENST00000445371 SAMD9Q5K651 1589 aa10.99□□□□□ -0.65
SDHCP3-201ENST00000445371 DISP1Q96F81 1524 aa10.98□□□□□ -0.65
SDHCP3-201ENST00000445371 RIMBP3CA6NJZ7 1639 aa10.98□□□□□ -0.65
SDHCP3-201ENST00000445371 RIMBP3BA6NNM3 1639 aa10.98□□□□□ -0.65
SDHCP3-201ENST00000445371 RIMBP3Q9UFD9 1639 aa10.98□□□□□ -0.65
SDHCP3-201ENST00000445371 KIAA0556O60303 1618 aa10.95□□□□□ -0.66
SDHCP3-201ENST00000445371 CLASP1Q7Z460 1538 aa10.95□□□□□ -0.66
SDHCP3-201ENST00000445371 PPARGC1BQ86YN6 1023 aaKnown RBP10.95□□□□□ -0.66
SDHCP3-201ENST00000445371 PTPRGP23470 1445 aa10.94□□□□□ -0.66
SDHCP3-201ENST00000445371 CASKIN1Q8WXD9 1431 aa10.94□□□□□ -0.66
SDHCP3-201ENST00000445371 FYCO1Q9BQS8 1478 aa10.93□□□□□ -0.66
SDHCP3-201ENST00000445371 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.92□□□□□ -0.66
SDHCP3-201ENST00000445371 HNRNPUL2Q1KMD3 747 aaKnown RBP10.92□□□□□ -0.66
SDHCP3-201ENST00000445371 SHROOM2Q13796 1616 aa10.9□□□□□ -0.66
SDHCP3-201ENST00000445371 ARID3CA6NKF2 412 aa10.89□□□□□ -0.67
SDHCP3-201ENST00000445371 TRHP20396 242 aaPredicted RBP10.89□□□□□ -0.67
SDHCP3-201ENST00000445371 PCF11O94913 1555 aaKnown RBP10.89□□□□□ -0.67
SDHCP3-201ENST00000445371 CDK11AQ9UQ88 783 aaPredicted RBP10.88□□□□□ -0.67
SDHCP3-201ENST00000445371 HECW1Q76N89 1606 aa10.87□□□□□ -0.67
SDHCP3-201ENST00000445371 CCDC18Q5T9S5 1454 aa10.87□□□□□ -0.67
SDHCP3-201ENST00000445371 PLB1Q6P1J6 1458 aa10.87□□□□□ -0.67
SDHCP3-201ENST00000445371 UACAQ9BZF9 1416 aa10.85□□□□□ -0.67
SDHCP3-201ENST00000445371 ARHGEF11O15085 1522 aa10.85□□□□□ -0.67
SDHCP3-201ENST00000445371 MAP3K1Q13233 1512 aa10.85□□□□□ -0.67
SDHCP3-201ENST00000445371 KANK4Q5T7N3 995 aaPredicted RBP10.85□□□□□ -0.67
SDHCP3-201ENST00000445371 MTUS2Q5JR59 1369 aa10.85□□□□□ -0.67
SDHCP3-201ENST00000445371 TRIM26Q12899 539 aaPredicted RBP10.84□□□□□ -0.67
SDHCP3-201ENST00000445371 ERCC6L2Q5T890 1561 aa10.84□□□□□ -0.67
SDHCP3-201ENST00000445371 TIAM1Q13009 1591 aa10.83□□□□□ -0.68
SDHCP3-201ENST00000445371 RAPGEF6Q8TEU7 1601 aa10.83□□□□□ -0.68
SDHCP3-201ENST00000445371 EPRSP07814 1512 aaKnown RBP10.83□□□□□ -0.68
SDHCP3-201ENST00000445371 NUP153P49790 1475 aaKnown RBP10.82□□□□□ -0.68
SDHCP3-201ENST00000445371 LRRC9Q6ZRR7 1453 aa10.82□□□□□ -0.68
SDHCP3-201ENST00000445371 PLEKHD1A6NEE1 506 aa10.82□□□□□ -0.68
SDHCP3-201ENST00000445371 NPM1P06748 294 aaKnown RBP eCLIP10.82□□□□□ -0.68
SDHCP3-201ENST00000445371 ILDR1Q86SU0 546 aaPredicted RBP10.81□□□□□ -0.68
SDHCP3-201ENST00000445371 ABCA8O94911 1581 aa10.8□□□□□ -0.68
SDHCP3-201ENST00000445371 CDK13Q14004 1512 aaKnown RBP10.79□□□□□ -0.68
SDHCP3-201ENST00000445371 PCGF6Q9BYE7 350 aa10.79□□□□□ -0.68
SDHCP3-201ENST00000445371 ABCC2Q92887 1545 aa10.79□□□□□ -0.68
SDHCP3-201ENST00000445371 CYB5RLQ6IPT4 315 aa10.78□□□□□ -0.68
SDHCP3-201ENST00000445371 UHRF1BP1LA0JNW5 1464 aa10.77□□□□□ -0.69
SDHCP3-201ENST00000445371 CFAP43Q8NDM7 1665 aa10.76□□□□□ -0.69
SDHCP3-201ENST00000445371 ATP10BO94823 1461 aa10.76□□□□□ -0.69
SDHCP3-201ENST00000445371 EHBP1L1Q8N3D4 1523 aa10.76□□□□□ -0.69
SDHCP3-201ENST00000445371 TROQ12816 1431 aaPredicted RBP10.74□□□□□ -0.69
SDHCP3-201ENST00000445371 KCNH8Q96L42 1107 aa10.72□□□□□ -0.69
SDHCP3-201ENST00000445371 NCOA2Q15596 1464 aa10.72□□□□□ -0.69
SDHCP3-201ENST00000445371 FAM50AQ14320 339 aaKnown RBP10.71□□□□□ -0.69
SDHCP3-201ENST00000445371 PHLDB1Q86UU1 1377 aa10.71□□□□□ -0.69
SDHCP3-201ENST00000445371 CCNB3Q8WWL7 1395 aa10.71□□□□□ -0.69
SDHCP3-201ENST00000445371 KDM5BQ9UGL1 1544 aa10.71□□□□□ -0.69
SDHCP3-201ENST00000445371 MAGI3Q5TCQ9 1506 aa10.7□□□□□ -0.7
SDHCP3-201ENST00000445371 SUPT6HQ7KZ85 1726 aaKnown RBP10.69□□□□□ -0.7
SDHCP3-201ENST00000445371 ADCY10Q96PN6 1610 aa10.69□□□□□ -0.7
SDHCP3-201ENST00000445371 MYOM3Q5VTT5 1437 aa10.67□□□□□ -0.7
SDHCP3-201ENST00000445371 LRRIQ1Q96JM4 1722 aa10.67□□□□□ -0.7
SDHCP3-201ENST00000445371 KIF14Q15058 1648 aa10.67□□□□□ -0.7
SDHCP3-201ENST00000445371 ITGAEP38570 1179 aa10.67□□□□□ -0.7
SDHCP3-201ENST00000445371 CFDP1Q9UEE9 299 aaPredicted RBP10.67□□□□□ -0.7
SDHCP3-201ENST00000445371 ZCCHC11Q5TAX3 1644 aaKnown RBP10.66□□□□□ -0.7
SDHCP3-201ENST00000445371 WDR7Q9Y4E6 1490 aa10.66□□□□□ -0.7
SDHCP3-201ENST00000445371 FGD6Q6ZV73 1430 aa10.66□□□□□ -0.7
SDHCP3-201ENST00000445371 ASXL2Q76L83 1435 aa10.66□□□□□ -0.7
SDHCP3-201ENST00000445371 RRBP1Q9P2E9 1410 aaKnown RBP10.66□□□□□ -0.7
SDHCP3-201ENST00000445371 ZNF777Q9ULD5 760 aaPredicted RBP10.65□□□□□ -0.7
SDHCP3-201ENST00000445371 MIA2Q96PC5 1412 aa10.64□□□□□ -0.71
SDHCP3-201ENST00000445371 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.62□□□□□ -0.71
SDHCP3-201ENST00000445371 GPATCH8Q9UKJ3 1502 aaKnown RBP10.61□□□□□ -0.71
SDHCP3-201ENST00000445371 EFCAB2Q5VUJ9 269 aa10.6□□□□□ -0.71
SDHCP3-201ENST00000445371 ABCC10Q5T3U5 1492 aa10.6□□□□□ -0.71
SDHCP3-201ENST00000445371 ARHGAP5Q13017 1502 aa10.58□□□□□ -0.72
SDHCP3-201ENST00000445371 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.58□□□□□ -0.72
SDHCP3-201ENST00000445371 ZNF644Q9H582 1327 aaPredicted RBP10.58□□□□□ -0.72
SDHCP3-201ENST00000445371 MAPKBP1O60336 1514 aa10.57□□□□□ -0.72
SDHCP3-201ENST00000445371 PLCH2O75038 1416 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms