RNA–Protein interactions for RNA: ENST00000445215.5

POLDIP3-204, Transcript of DNA polymerase delta interacting protein 3, humanhuman

TSL 1 (best)

Gene POLDIP3, Length 3,337 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLDIP3-204ENST00000445215 EIF4G3O43432 1585 aaKnown RBP14.48□□□□□ -0.09
POLDIP3-204ENST00000445215 CHMP7Q8WUX9 453 aaPredicted RBP14.48□□□□□ -0.09
POLDIP3-204ENST00000445215 SNAPC4Q5SXM2 1469 aa14.47□□□□□ -0.09
POLDIP3-204ENST00000445215 TRIM26Q12899 539 aaPredicted RBP14.46□□□□□ -0.1
POLDIP3-204ENST00000445215 VPS8Q8N3P4 1428 aa14.45□□□□□ -0.1
POLDIP3-204ENST00000445215 ATP1B4Q9UN42 357 aaPredicted RBP14.44□□□□□ -0.1
POLDIP3-204ENST00000445215 ADAMTS12P58397 1594 aa14.44□□□□□ -0.1
POLDIP3-204ENST00000445215 ARHGAP35Q9NRY4 1499 aa14.41□□□□□ -0.1
POLDIP3-204ENST00000445215 MAGI1Q96QZ7 1491 aaPredicted RBP14.4□□□□□ -0.1
POLDIP3-204ENST00000445215 ARAP1Q96P48 1450 aa14.4□□□□□ -0.1
POLDIP3-204ENST00000445215 CTTNBP2Q8WZ74 1663 aa14.38□□□□□ -0.11
POLDIP3-204ENST00000445215 SYNJ2O15056 1496 aa14.36□□□□□ -0.11
POLDIP3-204ENST00000445215 GRIN2AQ12879 1464 aa14.36□□□□□ -0.11
POLDIP3-204ENST00000445215 FHOD3Q2V2M9 1422 aa14.36□□□□□ -0.11
POLDIP3-204ENST00000445215 EFCAB5A4FU69 1503 aa14.33□□□□□ -0.12
POLDIP3-204ENST00000445215 IQGAP2Q13576 1575 aa14.31□□□□□ -0.12
POLDIP3-204ENST00000445215 KIAA0586Q9BVV6 1533 aa14.28□□□□□ -0.12
POLDIP3-204ENST00000445215 FMN1Q68DA7 1419 aa14.27□□□□□ -0.12
POLDIP3-204ENST00000445215 SLC24A1O60721 1099 aa14.26□□□□□ -0.13
POLDIP3-204ENST00000445215 JPH4Q96JJ6 628 aa14.23□□□□□ -0.13
POLDIP3-204ENST00000445215 CEP170Q5SW79 1584 aa14.22□□□□□ -0.13
POLDIP3-204ENST00000445215 KANK4Q5T7N3 995 aaPredicted RBP14.21□□□□□ -0.13
POLDIP3-204ENST00000445215 PCF11O94913 1555 aaKnown RBP14.21□□□□□ -0.13
POLDIP3-204ENST00000445215 SAMD9Q5K651 1589 aa14.21□□□□□ -0.13
POLDIP3-204ENST00000445215 NUP160Q12769 1436 aa14.2□□□□□ -0.14
POLDIP3-204ENST00000445215 CARMIL2Q6F5E8 1435 aa14.2□□□□□ -0.14
POLDIP3-204ENST00000445215 ARID3CA6NKF2 412 aa14.2□□□□□ -0.14
POLDIP3-204ENST00000445215 UGGT2Q9NYU1 1516 aa14.19□□□□□ -0.14
POLDIP3-204ENST00000445215 CASKIN1Q8WXD9 1431 aa14.19□□□□□ -0.14
POLDIP3-204ENST00000445215 FYCO1Q9BQS8 1478 aa14.19□□□□□ -0.14
POLDIP3-204ENST00000445215 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.18□□□□□ -0.14
POLDIP3-204ENST00000445215 HNRNPUL2Q1KMD3 747 aaKnown RBP14.18□□□□□ -0.14
POLDIP3-204ENST00000445215 CHD1O14646 1710 aa14.16□□□□□ -0.14
POLDIP3-204ENST00000445215 TIAM1Q13009 1591 aa14.15□□□□□ -0.14
POLDIP3-204ENST00000445215 MTUS2Q5JR59 1369 aa14.14□□□□□ -0.15
POLDIP3-204ENST00000445215 KIAA0556O60303 1618 aa14.14□□□□□ -0.15
POLDIP3-204ENST00000445215 DISP1Q96F81 1524 aa14.13□□□□□ -0.15
POLDIP3-204ENST00000445215 PRG4Q92954 1404 aaPredicted RBP14.11□□□□□ -0.15
POLDIP3-204ENST00000445215 LRRC9Q6ZRR7 1453 aa14.1□□□□□ -0.15
POLDIP3-204ENST00000445215 MAP3K1Q13233 1512 aa14.1□□□□□ -0.15
POLDIP3-204ENST00000445215 HECW1Q76N89 1606 aa14.09□□□□□ -0.15
POLDIP3-204ENST00000445215 ITGAEP38570 1179 aa14.08□□□□□ -0.16
POLDIP3-204ENST00000445215 ZEB1P37275 1124 aaPredicted RBP14.07□□□□□ -0.16
POLDIP3-204ENST00000445215 CCDC18Q5T9S5 1454 aa14.07□□□□□ -0.16
POLDIP3-204ENST00000445215 CDK11AQ9UQ88 783 aaPredicted RBP14.07□□□□□ -0.16
POLDIP3-204ENST00000445215 CFAP43Q8NDM7 1665 aa14.06□□□□□ -0.16
POLDIP3-204ENST00000445215 FAM50AQ14320 339 aaKnown RBP14.06□□□□□ -0.16
POLDIP3-204ENST00000445215 PTPRGP23470 1445 aa14.05□□□□□ -0.16
POLDIP3-204ENST00000445215 SCAF1Q9H7N4 1312 aaKnown RBP14.03□□□□□ -0.16
POLDIP3-204ENST00000445215 EPRSP07814 1512 aaKnown RBP14.03□□□□□ -0.16
POLDIP3-204ENST00000445215 PLB1Q6P1J6 1458 aa14.02□□□□□ -0.16
POLDIP3-204ENST00000445215 OSCARQ8IYS5 282 aa14.02□□□□□ -0.16
POLDIP3-204ENST00000445215 CDK13Q14004 1512 aaKnown RBP14.02□□□□□ -0.16
POLDIP3-204ENST00000445215 CCNB3Q8WWL7 1395 aa14.02□□□□□ -0.17
POLDIP3-204ENST00000445215 RAPGEF6Q8TEU7 1601 aa14.01□□□□□ -0.17
POLDIP3-204ENST00000445215 CCER1Q8TC90 406 aaPredicted RBP14.01□□□□□ -0.17
POLDIP3-204ENST00000445215 PHLDB1Q86UU1 1377 aa14□□□□□ -0.17
POLDIP3-204ENST00000445215 EHBP1L1Q8N3D4 1523 aa13.99□□□□□ -0.17
POLDIP3-204ENST00000445215 NUP153P49790 1475 aaKnown RBP13.98□□□□□ -0.17
POLDIP3-204ENST00000445215 RRBP1Q9P2E9 1410 aaKnown RBP13.96□□□□□ -0.17
POLDIP3-204ENST00000445215 PLEKHD1A6NEE1 506 aa13.96□□□□□ -0.17
POLDIP3-204ENST00000445215 CLASP1Q7Z460 1538 aa13.96□□□□□ -0.17
POLDIP3-204ENST00000445215 NCOA2Q15596 1464 aa13.95□□□□□ -0.18
POLDIP3-204ENST00000445215 SUPT6HQ7KZ85 1726 aaKnown RBP13.94□□□□□ -0.18
POLDIP3-204ENST00000445215 LRRIQ1Q96JM4 1722 aa13.94□□□□□ -0.18
POLDIP3-204ENST00000445215 SHROOM2Q13796 1616 aa13.94□□□□□ -0.18
POLDIP3-204ENST00000445215 ERCC6L2Q5T890 1561 aa13.93□□□□□ -0.18
POLDIP3-204ENST00000445215 UACAQ9BZF9 1416 aa13.93□□□□□ -0.18
POLDIP3-204ENST00000445215 MAGI3Q5TCQ9 1506 aa13.91□□□□□ -0.18
POLDIP3-204ENST00000445215 ABCA8O94911 1581 aa13.91□□□□□ -0.18
POLDIP3-204ENST00000445215 MYOM3Q5VTT5 1437 aa13.91□□□□□ -0.18
POLDIP3-204ENST00000445215 FGD6Q6ZV73 1430 aa13.91□□□□□ -0.18
POLDIP3-204ENST00000445215 MYT1Q01538 1121 aa13.89□□□□□ -0.19
POLDIP3-204ENST00000445215 TROQ12816 1431 aaPredicted RBP13.89□□□□□ -0.19
POLDIP3-204ENST00000445215 PELP1Q8IZL8 1130 aaKnown RBP13.89□□□□□ -0.19
POLDIP3-204ENST00000445215 ATP10BO94823 1461 aa13.88□□□□□ -0.19
POLDIP3-204ENST00000445215 ZNF777Q9ULD5 760 aaPredicted RBP13.87□□□□□ -0.19
POLDIP3-204ENST00000445215 KCNH8Q96L42 1107 aa13.85□□□□□ -0.19
POLDIP3-204ENST00000445215 CFDP1Q9UEE9 299 aaPredicted RBP13.85□□□□□ -0.19
POLDIP3-204ENST00000445215 ABCC2Q92887 1545 aa13.84□□□□□ -0.19
POLDIP3-204ENST00000445215 NPM1P06748 294 aaKnown RBP eCLIP13.83□□□□□ -0.2
POLDIP3-204ENST00000445215 NEUROD1Q13562 356 aa13.81□□□□□ -0.2
POLDIP3-204ENST00000445215 CHIC2Q9UKJ5 165 aa13.8□□□□□ -0.2
POLDIP3-204ENST00000445215 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.8□□□□□ -0.2
POLDIP3-204ENST00000445215 KIF14Q15058 1648 aa13.8□□□□□ -0.2
POLDIP3-204ENST00000445215 PTPN23Q9H3S7 1636 aa13.8□□□□□ -0.2
POLDIP3-204ENST00000445215 MIA2Q96PC5 1412 aa13.8□□□□□ -0.2
POLDIP3-204ENST00000445215 ARHGEF11O15085 1522 aa13.79□□□□□ -0.2
POLDIP3-204ENST00000445215 SETD5Q9C0A6 1442 aa13.77□□□□□ -0.21
POLDIP3-204ENST00000445215 ZNF644Q9H582 1327 aaPredicted RBP13.76□□□□□ -0.21
POLDIP3-204ENST00000445215 DIEXFQ68CQ4 756 aaKnown RBP13.76□□□□□ -0.21
POLDIP3-204ENST00000445215 UHRF1BP1LA0JNW5 1464 aa13.76□□□□□ -0.21
POLDIP3-204ENST00000445215 RAB3GAP2Q9H2M9 1393 aa13.75□□□□□ -0.21
POLDIP3-204ENST00000445215 RRP7BPQ9NSQ0 103 aa13.75□□□□□ -0.21
POLDIP3-204ENST00000445215 GPATCH8Q9UKJ3 1502 aaKnown RBP13.73□□□□□ -0.21
POLDIP3-204ENST00000445215 ITSN2Q9NZM3 1697 aa13.73□□□□□ -0.21
POLDIP3-204ENST00000445215 YTHDC1Q96MU7 727 aaKnown RBP13.72□□□□□ -0.21
POLDIP3-204ENST00000445215 ACIN1Q9UKV3 1341 aaKnown RBP13.72□□□□□ -0.21
POLDIP3-204ENST00000445215 TCOF1Q13428 1488 aaKnown RBP13.72□□□□□ -0.21
POLDIP3-204ENST00000445215 CYB5RLQ6IPT4 315 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms