RNA–Protein interactions for RNA: ENST00000444532.2

CCDC188-202, Transcript of coiled-coil domain containing 188, humanhuman

TSL 3

Gene CCDC188, Length 628 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-202ENST00000444532 ERCC6L2Q5T890 1561 aa31.59■■■□□ 2.65
CCDC188-202ENST00000444532 KIAA0586Q9BVV6 1533 aa31.57■■■□□ 2.64
CCDC188-202ENST00000444532 PRG4Q92954 1404 aaPredicted RBP31.53■■■□□ 2.64
CCDC188-202ENST00000444532 RAPGEF2Q9Y4G8 1499 aa31.48■■■□□ 2.63
CCDC188-202ENST00000444532 IQGAP2Q13576 1575 aa31.35■■■□□ 2.61
CCDC188-202ENST00000444532 PRXQ9BXM0 1461 aa31.31■■■□□ 2.6
CCDC188-202ENST00000444532 EEA1Q15075 1411 aa31.27■■■□□ 2.6
CCDC188-202ENST00000444532 CSRNP3Q8WYN3 585 aa31.26■■■□□ 2.59
CCDC188-202ENST00000444532 TRHP20396 242 aaPredicted RBP31.25■■■□□ 2.59
CCDC188-202ENST00000444532 CARMIL2Q6F5E8 1435 aa31.24■■■□□ 2.59
CCDC188-202ENST00000444532 CHIC1Q5VXU3 224 aa31.24■■■□□ 2.59
CCDC188-202ENST00000444532 CTTNBP2Q8WZ74 1663 aa31.2■■■□□ 2.59
CCDC188-202ENST00000444532 UGGT2Q9NYU1 1516 aa31.18■■■□□ 2.58
CCDC188-202ENST00000444532 TNIKQ9UKE5 1360 aa31.15■■■□□ 2.58
CCDC188-202ENST00000444532 PTPRGP23470 1445 aa31.14■■■□□ 2.58
CCDC188-202ENST00000444532 DISP1Q96F81 1524 aa31.14■■■□□ 2.57
CCDC188-202ENST00000444532 ADCY10Q96PN6 1610 aa31.07■■■□□ 2.56
CCDC188-202ENST00000444532 NPM1P06748 294 aaKnown RBP eCLIP31.06■■■□□ 2.56
CCDC188-202ENST00000444532 FAM9AQ8IZU1 332 aaPredicted RBP31.05■■■□□ 2.56
CCDC188-202ENST00000444532 KIAA0556O60303 1618 aa31.03■■■□□ 2.56
CCDC188-202ENST00000444532 TTBK1Q5TCY1 1321 aaPredicted RBP31.01■■■□□ 2.56
CCDC188-202ENST00000444532 GOLGA3Q08378 1498 aa31.01■■■□□ 2.55
CCDC188-202ENST00000444532 KIF21BO75037 1637 aa30.94■■■□□ 2.54
CCDC188-202ENST00000444532 MAPKBP1O60336 1514 aa30.93■■■□□ 2.54
CCDC188-202ENST00000444532 UACAQ9BZF9 1416 aa30.92■■■□□ 2.54
CCDC188-202ENST00000444532 UHRF1BP1LA0JNW5 1464 aa30.92■■■□□ 2.54
CCDC188-202ENST00000444532 ABCC2Q92887 1545 aa30.88■■■□□ 2.53
CCDC188-202ENST00000444532 KIF13AQ9H1H9 1805 aa30.84■■■□□ 2.53
CCDC188-202ENST00000444532 ABCC10Q5T3U5 1492 aa30.82■■■□□ 2.52
CCDC188-202ENST00000444532 SAMD9Q5K651 1589 aa30.77■■■□□ 2.52
CCDC188-202ENST00000444532 KDM5BQ9UGL1 1544 aa30.77■■■□□ 2.52
CCDC188-202ENST00000444532 FAM69CQ0P6D2 419 aa30.76■■■□□ 2.51
CCDC188-202ENST00000444532 PLB1Q6P1J6 1458 aa30.75■■■□□ 2.51
CCDC188-202ENST00000444532 P3H3Q8IVL6 736 aa30.74■■■□□ 2.51
CCDC188-202ENST00000444532 DIP2BQ9P265 1576 aa30.74■■■□□ 2.51
CCDC188-202ENST00000444532 ABCA8O94911 1581 aa30.72■■■□□ 2.51
CCDC188-202ENST00000444532 ASXL2Q76L83 1435 aa30.7■■■□□ 2.5
CCDC188-202ENST00000444532 UBTFP17480 764 aaKnown RBP30.69■■■□□ 2.5
CCDC188-202ENST00000444532 ZCCHC11Q5TAX3 1644 aaKnown RBP30.69■■■□□ 2.5
CCDC188-202ENST00000444532 RANGAP1P46060 587 aaPredicted RBP30.66■■■□□ 2.5
CCDC188-202ENST00000444532 EHMT2Q96KQ7 1210 aa30.64■■■□□ 2.5
CCDC188-202ENST00000444532 EFCAB5A4FU69 1503 aa30.62■■■□□ 2.49
CCDC188-202ENST00000444532 GLI2P10070 1586 aa30.57■■■□□ 2.48
CCDC188-202ENST00000444532 FHOD3Q2V2M9 1422 aa30.55■■■□□ 2.48
CCDC188-202ENST00000444532 RAPGEF6Q8TEU7 1601 aa30.52■■■□□ 2.48
CCDC188-202ENST00000444532 EPRSP07814 1512 aaKnown RBP30.52■■■□□ 2.48
CCDC188-202ENST00000444532 WDR7Q9Y4E6 1490 aa30.51■■■□□ 2.48
CCDC188-202ENST00000444532 TSPOAP1O95153 1857 aa30.5■■■□□ 2.47
CCDC188-202ENST00000444532 ATP10BO94823 1461 aa30.48■■■□□ 2.47
CCDC188-202ENST00000444532 MAP3K4Q9Y6R4 1608 aa30.41■■■□□ 2.46
CCDC188-202ENST00000444532 ARID3CA6NKF2 412 aa30.41■■■□□ 2.46
CCDC188-202ENST00000444532 ARHGAP35Q9NRY4 1499 aa30.4■■■□□ 2.46
CCDC188-202ENST00000444532 NUP153P49790 1475 aaKnown RBP30.39■■■□□ 2.46
CCDC188-202ENST00000444532 KCNH8Q96L42 1107 aa30.38■■■□□ 2.45
CCDC188-202ENST00000444532 PPRC1Q5VV67 1664 aaKnown RBP30.37■■■□□ 2.45
CCDC188-202ENST00000444532 FMN1Q68DA7 1419 aa30.35■■■□□ 2.45
CCDC188-202ENST00000444532 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.33■■■□□ 2.45
CCDC188-202ENST00000444532 HNRNPUL2Q1KMD3 747 aaKnown RBP30.33■■■□□ 2.45
CCDC188-202ENST00000444532 CFAP43Q8NDM7 1665 aa30.31■■■□□ 2.44
CCDC188-202ENST00000444532 KDM6BO15054 1643 aa30.31■■■□□ 2.44
CCDC188-202ENST00000444532 TEX14Q8IWB6 1497 aa30.3■■■□□ 2.44
CCDC188-202ENST00000444532 CD109Q6YHK3 1445 aa30.27■■■□□ 2.44
CCDC188-202ENST00000444532 MAGI3Q5TCQ9 1506 aa30.22■■■□□ 2.43
CCDC188-202ENST00000444532 PLEKHD1A6NEE1 506 aa30.22■■■□□ 2.43
CCDC188-202ENST00000444532 HECW1Q76N89 1606 aa30.2■■■□□ 2.43
CCDC188-202ENST00000444532 ABCA9Q8IUA7 1624 aa30.19■■■□□ 2.42
CCDC188-202ENST00000444532 ATP1B4Q9UN42 357 aaPredicted RBP30.17■■■□□ 2.42
CCDC188-202ENST00000444532 CLIP1P30622 1438 aa30.16■■■□□ 2.42
CCDC188-202ENST00000444532 CDK13Q14004 1512 aaKnown RBP30.15■■■□□ 2.42
CCDC188-202ENST00000444532 COL17A1Q9UMD9 1497 aaPredicted RBP30.1■■■□□ 2.41
CCDC188-202ENST00000444532 CDK11AQ9UQ88 783 aaPredicted RBP30.08■■■□□ 2.41
CCDC188-202ENST00000444532 CASKIN1Q8WXD9 1431 aa30.07■■■□□ 2.4
CCDC188-202ENST00000444532 PCF11O94913 1555 aaKnown RBP30.03■■■□□ 2.4
CCDC188-202ENST00000444532 PHLDB1Q86UU1 1377 aa30.03■■■□□ 2.4
CCDC188-202ENST00000444532 LRRIQ1Q96JM4 1722 aa30.02■■■□□ 2.4
CCDC188-202ENST00000444532 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP30.01■■■□□ 2.39
CCDC188-202ENST00000444532 CCDC18Q5T9S5 1454 aa29.99■■■□□ 2.39
CCDC188-202ENST00000444532 FYCO1Q9BQS8 1478 aa29.99■■■□□ 2.39
CCDC188-202ENST00000444532 ARAP3Q8WWN8 1544 aa29.98■■■□□ 2.39
CCDC188-202ENST00000444532 NEO1Q92859 1461 aa29.98■■■□□ 2.39
CCDC188-202ENST00000444532 CEP162Q5TB80 1403 aa29.97■■■□□ 2.39
CCDC188-202ENST00000444532 LOC105371045A0A1W2PR82 267 aa29.96■■■□□ 2.39
CCDC188-202ENST00000444532 TTC37Q6PGP7 1564 aa29.94■■■□□ 2.38
CCDC188-202ENST00000444532 TROQ12816 1431 aaPredicted RBP29.94■■■□□ 2.38
CCDC188-202ENST00000444532 KIF14Q15058 1648 aa29.89■■■□□ 2.37
CCDC188-202ENST00000444532 CFAP74Q9C0B2 1584 aa29.88■■■□□ 2.37
CCDC188-202ENST00000444532 FANCAO15360 1455 aa29.86■■■□□ 2.37
CCDC188-202ENST00000444532 PLCH2O75038 1416 aa29.85■■■□□ 2.37
CCDC188-202ENST00000444532 AEBP2Q6ZN18 517 aaPredicted RBP29.83■■■□□ 2.37
CCDC188-202ENST00000444532 MYO5CQ9NQX4 1742 aa29.82■■■□□ 2.36
CCDC188-202ENST00000444532 AKNAQ7Z591 1439 aa29.82■■■□□ 2.36
CCDC188-202ENST00000444532 RAPGEF3O95398 923 aa29.79■■■□□ 2.36
CCDC188-202ENST00000444532 EFCAB2Q5VUJ9 269 aa29.75■■■□□ 2.35
CCDC188-202ENST00000444532 DENND4BO75064 1496 aaPredicted RBP29.74■■■□□ 2.35
CCDC188-202ENST00000444532 FRMPD1Q5SYB0 1578 aa29.73■■■□□ 2.35
CCDC188-202ENST00000444532 KDM4FA0A1W2PPD8 638 aa29.71■■■□□ 2.35
CCDC188-202ENST00000444532 RICTORQ6R327 1708 aa29.71■■■□□ 2.35
CCDC188-202ENST00000444532 ADGRL1O94910 1474 aa29.68■■■□□ 2.34
CCDC188-202ENST00000444532 ARHGAP5Q13017 1502 aa29.68■■■□□ 2.34
CCDC188-202ENST00000444532 CDC42BPBQ9Y5S2 1711 aa29.67■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms