RNA–Protein interactions for RNA: ENST00000444415.7

TRAF4-205, Transcript of TNF receptor associated factor 4, humanhuman

TSL 5 BASIC

Gene TRAF4, Length 1,456 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-205ENST00000444415 KIAA0586Q9BVV6 1533 aa37.11■■■■□ 3.53
TRAF4-205ENST00000444415 JPH4Q96JJ6 628 aa37.07■■■■□ 3.53
TRAF4-205ENST00000444415 PRG4Q92954 1404 aaPredicted RBP37.06■■■■□ 3.52
TRAF4-205ENST00000444415 RAPGEF2Q9Y4G8 1499 aa37.05■■■■□ 3.52
TRAF4-205ENST00000444415 PRXQ9BXM0 1461 aa36.96■■■■□ 3.51
TRAF4-205ENST00000444415 CHIC1Q5VXU3 224 aa36.94■■■■□ 3.5
TRAF4-205ENST00000444415 IQGAP2Q13576 1575 aa36.91■■■■□ 3.5
TRAF4-205ENST00000444415 CTTNBP2Q8WZ74 1663 aa36.79■■■■□ 3.48
TRAF4-205ENST00000444415 EEA1Q15075 1411 aa36.78■■■■□ 3.48
TRAF4-205ENST00000444415 CSRNP3Q8WYN3 585 aa36.76■■■■□ 3.48
TRAF4-205ENST00000444415 DISP1Q96F81 1524 aa36.73■■■■□ 3.47
TRAF4-205ENST00000444415 UGGT2Q9NYU1 1516 aa36.73■■■■□ 3.47
TRAF4-205ENST00000444415 FAM9AQ8IZU1 332 aaPredicted RBP36.62■■■■□ 3.45
TRAF4-205ENST00000444415 ADCY10Q96PN6 1610 aa36.62■■■■□ 3.45
TRAF4-205ENST00000444415 CARMIL2Q6F5E8 1435 aa36.62■■■■□ 3.45
TRAF4-205ENST00000444415 KIAA0556O60303 1618 aa36.61■■■■□ 3.45
TRAF4-205ENST00000444415 TNIKQ9UKE5 1360 aa36.57■■■■□ 3.45
TRAF4-205ENST00000444415 PTPRGP23470 1445 aa36.55■■■■□ 3.44
TRAF4-205ENST00000444415 KIF21BO75037 1637 aa36.53■■■■□ 3.44
TRAF4-205ENST00000444415 TRHP20396 242 aaPredicted RBP36.5■■■■□ 3.43
TRAF4-205ENST00000444415 TTBK1Q5TCY1 1321 aaPredicted RBP36.44■■■■□ 3.42
TRAF4-205ENST00000444415 GOLGA3Q08378 1498 aa36.39■■■■□ 3.42
TRAF4-205ENST00000444415 MAPKBP1O60336 1514 aa36.36■■■■□ 3.41
TRAF4-205ENST00000444415 UHRF1BP1LA0JNW5 1464 aa36.35■■■■□ 3.41
TRAF4-205ENST00000444415 SAMD9Q5K651 1589 aa36.34■■■■□ 3.41
TRAF4-205ENST00000444415 UACAQ9BZF9 1416 aa36.34■■■■□ 3.41
TRAF4-205ENST00000444415 KIF13AQ9H1H9 1805 aa36.33■■■■□ 3.41
TRAF4-205ENST00000444415 ABCC2Q92887 1545 aa36.32■■■■□ 3.41
TRAF4-205ENST00000444415 PLB1Q6P1J6 1458 aa36.25■■■■□ 3.39
TRAF4-205ENST00000444415 NPM1P06748 294 aaKnown RBP eCLIP36.24■■■■□ 3.39
TRAF4-205ENST00000444415 ABCA8O94911 1581 aa36.22■■■■□ 3.39
TRAF4-205ENST00000444415 KDM5BQ9UGL1 1544 aa36.2■■■■□ 3.39
TRAF4-205ENST00000444415 DIP2BQ9P265 1576 aa36.2■■■■□ 3.39
TRAF4-205ENST00000444415 ABCC10Q5T3U5 1492 aa36.19■■■■□ 3.38
TRAF4-205ENST00000444415 EHMT2Q96KQ7 1210 aa36.18■■■■□ 3.38
TRAF4-205ENST00000444415 P3H3Q8IVL6 736 aa36.17■■■■□ 3.38
TRAF4-205ENST00000444415 ZCCHC11Q5TAX3 1644 aaKnown RBP36.16■■■■□ 3.38
TRAF4-205ENST00000444415 ASXL2Q76L83 1435 aa36.1■■■■□ 3.37
TRAF4-205ENST00000444415 RANGAP1P46060 587 aaPredicted RBP36.08■■■■□ 3.37
TRAF4-205ENST00000444415 FHOD3Q2V2M9 1422 aa36.06■■■■□ 3.36
TRAF4-205ENST00000444415 EFCAB5A4FU69 1503 aa36.06■■■■□ 3.36
TRAF4-205ENST00000444415 UBTFP17480 764 aaKnown RBP36.04■■■■□ 3.36
TRAF4-205ENST00000444415 FAM69CQ0P6D2 419 aa36.04■■■■□ 3.36
TRAF4-205ENST00000444415 RAPGEF6Q8TEU7 1601 aa35.97■■■■□ 3.35
TRAF4-205ENST00000444415 ARHGAP35Q9NRY4 1499 aa35.93■■■■□ 3.34
TRAF4-205ENST00000444415 GLI2P10070 1586 aa35.92■■■■□ 3.34
TRAF4-205ENST00000444415 EPRSP07814 1512 aaKnown RBP35.9■■■■□ 3.34
TRAF4-205ENST00000444415 WDR7Q9Y4E6 1490 aa35.89■■■■□ 3.34
TRAF4-205ENST00000444415 TSPOAP1O95153 1857 aa35.89■■■■□ 3.34
TRAF4-205ENST00000444415 ATP10BO94823 1461 aa35.88■■■■□ 3.33
TRAF4-205ENST00000444415 NUP153P49790 1475 aaKnown RBP35.87■■■■□ 3.33
TRAF4-205ENST00000444415 PPRC1Q5VV67 1664 aaKnown RBP35.85■■■■□ 3.33
TRAF4-205ENST00000444415 ARID3CA6NKF2 412 aa35.81■■■■□ 3.32
TRAF4-205ENST00000444415 MAP3K4Q9Y6R4 1608 aa35.8■■■■□ 3.32
TRAF4-205ENST00000444415 FMN1Q68DA7 1419 aa35.66■■■■□ 3.3
TRAF4-205ENST00000444415 CFAP43Q8NDM7 1665 aa35.63■■■■□ 3.29
TRAF4-205ENST00000444415 KCNH8Q96L42 1107 aa35.61■■■■□ 3.29
TRAF4-205ENST00000444415 CDK13Q14004 1512 aaKnown RBP35.61■■■■□ 3.29
TRAF4-205ENST00000444415 KDM6BO15054 1643 aa35.59■■■■□ 3.29
TRAF4-205ENST00000444415 HECW1Q76N89 1606 aa35.58■■■■□ 3.29
TRAF4-205ENST00000444415 LRRIQ1Q96JM4 1722 aa35.57■■■■□ 3.29
TRAF4-205ENST00000444415 CLIP1P30622 1438 aa35.57■■■■□ 3.28
TRAF4-205ENST00000444415 ABCA9Q8IUA7 1624 aa35.55■■■■□ 3.28
TRAF4-205ENST00000444415 CD109Q6YHK3 1445 aa35.52■■■■□ 3.28
TRAF4-205ENST00000444415 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP35.52■■■■□ 3.28
TRAF4-205ENST00000444415 HNRNPUL2Q1KMD3 747 aaKnown RBP35.52■■■■□ 3.28
TRAF4-205ENST00000444415 MAGI3Q5TCQ9 1506 aa35.51■■■■□ 3.28
TRAF4-205ENST00000444415 PCF11O94913 1555 aaKnown RBP35.51■■■■□ 3.28
TRAF4-205ENST00000444415 TEX14Q8IWB6 1497 aa35.48■■■■□ 3.27
TRAF4-205ENST00000444415 COL17A1Q9UMD9 1497 aaPredicted RBP35.48■■■■□ 3.27
TRAF4-205ENST00000444415 CASKIN1Q8WXD9 1431 aa35.43■■■■□ 3.26
TRAF4-205ENST00000444415 LOC105371045A0A1W2PR82 267 aa35.42■■■■□ 3.26
TRAF4-205ENST00000444415 CEP162Q5TB80 1403 aa35.41■■■■□ 3.26
TRAF4-205ENST00000444415 PLEKHD1A6NEE1 506 aa35.4■■■■□ 3.26
TRAF4-205ENST00000444415 ATP1B4Q9UN42 357 aaPredicted RBP35.39■■■■□ 3.26
TRAF4-205ENST00000444415 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP35.38■■■■□ 3.252e-6■■■□□ 16.3
TRAF4-205ENST00000444415 TTC37Q6PGP7 1564 aa35.36■■■■□ 3.25
TRAF4-205ENST00000444415 FYCO1Q9BQS8 1478 aa35.34■■■■□ 3.25
TRAF4-205ENST00000444415 KIF14Q15058 1648 aa35.27■■■■□ 3.24
TRAF4-205ENST00000444415 CCDC18Q5T9S5 1454 aa35.26■■■■□ 3.24
TRAF4-205ENST00000444415 TROQ12816 1431 aaPredicted RBP35.24■■■■□ 3.23
TRAF4-205ENST00000444415 ARAP3Q8WWN8 1544 aa35.21■■■■□ 3.23
TRAF4-205ENST00000444415 NEO1Q92859 1461 aa35.19■■■■□ 3.22
TRAF4-205ENST00000444415 CDK11AQ9UQ88 783 aaPredicted RBP35.16■■■■□ 3.22
TRAF4-205ENST00000444415 PHLDB1Q86UU1 1377 aa35.12■■■■□ 3.21
TRAF4-205ENST00000444415 FANCAO15360 1455 aa35.11■■■■□ 3.21
TRAF4-205ENST00000444415 MYO5CQ9NQX4 1742 aa35.11■■■■□ 3.21
TRAF4-205ENST00000444415 FRMPD1Q5SYB0 1578 aa35.1■■■■□ 3.21
TRAF4-205ENST00000444415 PLCH2O75038 1416 aa35.09■■■■□ 3.21
TRAF4-205ENST00000444415 CFAP74Q9C0B2 1584 aa35.07■■■■□ 3.2
TRAF4-205ENST00000444415 AKNAQ7Z591 1439 aa35.04■■■■□ 3.2
TRAF4-205ENST00000444415 RICTORQ6R327 1708 aa35.01■■■■□ 3.2
TRAF4-205ENST00000444415 CDC42BPBQ9Y5S2 1711 aa35.01■■■■□ 3.19
TRAF4-205ENST00000444415 RAPGEF3O95398 923 aa35■■■■□ 3.19
TRAF4-205ENST00000444415 VPS8Q8N3P4 1428 aa34.98■■■■□ 3.19
TRAF4-205ENST00000444415 PREX2Q70Z35 1606 aa34.96■■■■□ 3.19
TRAF4-205ENST00000444415 CDC42BPAQ5VT25 1732 aa34.95■■■■□ 3.19
TRAF4-205ENST00000444415 DENND4BO75064 1496 aaPredicted RBP34.93■■■■□ 3.18
TRAF4-205ENST00000444415 ADGRL1O94910 1474 aa34.91■■■■□ 3.18
TRAF4-205ENST00000444415 ARHGAP5Q13017 1502 aa34.91■■■■□ 3.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms