RNA–Protein interactions for RNA: ENST00000444408.1

AP1S3-207, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 4

Gene AP1S3, Length 561 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-207ENST00000444408 FAM9AQ8IZU1 332 aaPredicted RBP28.76■■■□□ 2.19
AP1S3-207ENST00000444408 CSRNP3Q8WYN3 585 aa28.68■■■□□ 2.18
AP1S3-207ENST00000444408 RAPGEF2Q9Y4G8 1499 aa28.67■■■□□ 2.18
AP1S3-207ENST00000444408 PRXQ9BXM0 1461 aa28.65■■■□□ 2.18
AP1S3-207ENST00000444408 EEA1Q15075 1411 aa28.63■■■□□ 2.17
AP1S3-207ENST00000444408 KIAA0586Q9BVV6 1533 aa28.57■■■□□ 2.16
AP1S3-207ENST00000444408 ERCC6L2Q5T890 1561 aa28.57■■■□□ 2.16
AP1S3-207ENST00000444408 SHROOM2Q13796 1616 aa28.54■■■□□ 2.16
AP1S3-207ENST00000444408 JPH4Q96JJ6 628 aa28.54■■■□□ 2.16
AP1S3-207ENST00000444408 PRG4Q92954 1404 aaPredicted RBP28.48■■■□□ 2.15
AP1S3-207ENST00000444408 IQGAP2Q13576 1575 aa28.43■■■□□ 2.14
AP1S3-207ENST00000444408 EHMT2Q96KQ7 1210 aa28.43■■■□□ 2.14
AP1S3-207ENST00000444408 KIF21BO75037 1637 aa28.37■■■□□ 2.13
AP1S3-207ENST00000444408 CTTNBP2Q8WZ74 1663 aa28.35■■■□□ 2.13
AP1S3-207ENST00000444408 UGGT2Q9NYU1 1516 aa28.28■■■□□ 2.12
AP1S3-207ENST00000444408 DISP1Q96F81 1524 aa28.28■■■□□ 2.12
AP1S3-207ENST00000444408 TTBK1Q5TCY1 1321 aaPredicted RBP28.24■■■□□ 2.11
AP1S3-207ENST00000444408 GOLGA3Q08378 1498 aa28.24■■■□□ 2.11
AP1S3-207ENST00000444408 CARMIL2Q6F5E8 1435 aa28.22■■■□□ 2.11
AP1S3-207ENST00000444408 AEBP2Q6ZN18 517 aaPredicted RBP28.21■■■□□ 2.11
AP1S3-207ENST00000444408 UBTFP17480 764 aaKnown RBP28.2■■■□□ 2.1
AP1S3-207ENST00000444408 RANGAP1P46060 587 aaPredicted RBP28.19■■■□□ 2.1
AP1S3-207ENST00000444408 KIAA0556O60303 1618 aa28.18■■■□□ 2.1
AP1S3-207ENST00000444408 TNIKQ9UKE5 1360 aa28.16■■■□□ 2.1
AP1S3-207ENST00000444408 PTPRGP23470 1445 aa28.15■■■□□ 2.1
AP1S3-207ENST00000444408 P3H3Q8IVL6 736 aa28.13■■■□□ 2.09
AP1S3-207ENST00000444408 SAMD9Q5K651 1589 aa28.04■■■□□ 2.08
AP1S3-207ENST00000444408 ADCY10Q96PN6 1610 aa28.02■■■□□ 2.08
AP1S3-207ENST00000444408 FHOD3Q2V2M9 1422 aa27.97■■■□□ 2.07
AP1S3-207ENST00000444408 LOC105371045A0A1W2PR82 267 aa27.96■■■□□ 2.07
AP1S3-207ENST00000444408 UACAQ9BZF9 1416 aa27.95■■■□□ 2.07
AP1S3-207ENST00000444408 PLB1Q6P1J6 1458 aa27.95■■■□□ 2.06
AP1S3-207ENST00000444408 ARHGAP35Q9NRY4 1499 aa27.9■■■□□ 2.06
AP1S3-207ENST00000444408 EFCAB5A4FU69 1503 aa27.9■■■□□ 2.06
AP1S3-207ENST00000444408 ABCC2Q92887 1545 aa27.89■■■□□ 2.06
AP1S3-207ENST00000444408 UHRF1BP1LA0JNW5 1464 aa27.89■■■□□ 2.05
AP1S3-207ENST00000444408 ABCA8O94911 1581 aa27.86■■■□□ 2.05
AP1S3-207ENST00000444408 KIF13AQ9H1H9 1805 aa27.85■■■□□ 2.05
AP1S3-207ENST00000444408 NPM1P06748 294 aaKnown RBP eCLIP27.85■■■□□ 2.05
AP1S3-207ENST00000444408 ARID3CA6NKF2 412 aa27.79■■■□□ 2.04
AP1S3-207ENST00000444408 KDM5BQ9UGL1 1544 aa27.77■■■□□ 2.04
AP1S3-207ENST00000444408 CLIP1P30622 1438 aa27.77■■■□□ 2.04
AP1S3-207ENST00000444408 MAPKBP1O60336 1514 aa27.74■■■□□ 2.03
AP1S3-207ENST00000444408 ZCCHC11Q5TAX3 1644 aaKnown RBP27.73■■■□□ 2.03
AP1S3-207ENST00000444408 RAPGEF6Q8TEU7 1601 aa27.73■■■□□ 2.03
AP1S3-207ENST00000444408 ABCC10Q5T3U5 1492 aa27.71■■■□□ 2.03
AP1S3-207ENST00000444408 FAM69CQ0P6D2 419 aa27.71■■■□□ 2.03
AP1S3-207ENST00000444408 CEP162Q5TB80 1403 aa27.7■■■□□ 2.03
AP1S3-207ENST00000444408 ASXL2Q76L83 1435 aa27.69■■■□□ 2.02
AP1S3-207ENST00000444408 NUP153P49790 1475 aaKnown RBP27.69■■■□□ 2.02
AP1S3-207ENST00000444408 ATP10BO94823 1461 aa27.67■■■□□ 2.02
AP1S3-207ENST00000444408 FMN1Q68DA7 1419 aa27.65■■■□□ 2.02
AP1S3-207ENST00000444408 DIP2BQ9P265 1576 aa27.61■■■□□ 2.01
AP1S3-207ENST00000444408 ATP1B4Q9UN42 357 aaPredicted RBP27.61■■■□□ 2.01
AP1S3-207ENST00000444408 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.56■■■□□ 2
AP1S3-207ENST00000444408 HNRNPUL2Q1KMD3 747 aaKnown RBP27.56■■■□□ 2
AP1S3-207ENST00000444408 WDR7Q9Y4E6 1490 aa27.55■■■□□ 2
AP1S3-207ENST00000444408 CDK13Q14004 1512 aaKnown RBP27.55■■■□□ 2
AP1S3-207ENST00000444408 PCF11O94913 1555 aaKnown RBP27.54■■■□□ 2
AP1S3-207ENST00000444408 EPRSP07814 1512 aaKnown RBP27.51■■■□□ 2
AP1S3-207ENST00000444408 KCNH8Q96L42 1107 aa27.51■■□□□ 1.99
AP1S3-207ENST00000444408 HECW1Q76N89 1606 aa27.51■■□□□ 1.99
AP1S3-207ENST00000444408 CASKIN1Q8WXD9 1431 aa27.5■■□□□ 1.99
AP1S3-207ENST00000444408 KDM6BO15054 1643 aa27.48■■□□□ 1.99
AP1S3-207ENST00000444408 LRRIQ1Q96JM4 1722 aa27.46■■□□□ 1.99
AP1S3-207ENST00000444408 GLI2P10070 1586 aa27.43■■□□□ 1.98
AP1S3-207ENST00000444408 FYCO1Q9BQS8 1478 aa27.42■■□□□ 1.98
AP1S3-207ENST00000444408 TSPOAP1O95153 1857 aa27.41■■□□□ 1.98
AP1S3-207ENST00000444408 PLEKHD1A6NEE1 506 aa27.4■■□□□ 1.98
AP1S3-207ENST00000444408 KDM4FA0A1W2PPD8 638 aa27.35■■□□□ 1.97
AP1S3-207ENST00000444408 MAP3K4Q9Y6R4 1608 aa27.34■■□□□ 1.97
AP1S3-207ENST00000444408 VPS8Q8N3P4 1428 aa27.33■■□□□ 1.96
AP1S3-207ENST00000444408 CCDC18Q5T9S5 1454 aa27.32■■□□□ 1.96
AP1S3-207ENST00000444408 PPRC1Q5VV67 1664 aaKnown RBP27.3■■□□□ 1.96
AP1S3-207ENST00000444408 MAGI3Q5TCQ9 1506 aa27.3■■□□□ 1.96
AP1S3-207ENST00000444408 CD109Q6YHK3 1445 aa27.29■■□□□ 1.96
AP1S3-207ENST00000444408 CDK11AQ9UQ88 783 aaPredicted RBP27.27■■□□□ 1.96
AP1S3-207ENST00000444408 ABCA9Q8IUA7 1624 aa27.26■■□□□ 1.95
AP1S3-207ENST00000444408 TROQ12816 1431 aaPredicted RBP27.25■■□□□ 1.95
AP1S3-207ENST00000444408 CFAP43Q8NDM7 1665 aa27.25■■□□□ 1.95
AP1S3-207ENST00000444408 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.23■■□□□ 1.95
AP1S3-207ENST00000444408 KIF14Q15058 1648 aa27.23■■□□□ 1.95
AP1S3-207ENST00000444408 TTC37Q6PGP7 1564 aa27.22■■□□□ 1.95
AP1S3-207ENST00000444408 TEX14Q8IWB6 1497 aa27.14■■□□□ 1.94
AP1S3-207ENST00000444408 COL17A1Q9UMD9 1497 aaPredicted RBP27.12■■□□□ 1.93
AP1S3-207ENST00000444408 MTUS2Q5JR59 1369 aa27.11■■□□□ 1.93
AP1S3-207ENST00000444408 TIAM1Q13009 1591 aa27.11■■□□□ 1.93
AP1S3-207ENST00000444408 KANK4Q5T7N3 995 aaPredicted RBP27.06■■□□□ 1.92
AP1S3-207ENST00000444408 ADGRL1O94910 1474 aa27.06■■□□□ 1.92
AP1S3-207ENST00000444408 PLCH2O75038 1416 aa27.05■■□□□ 1.92
AP1S3-207ENST00000444408 EHBP1L1Q8N3D4 1523 aa27.04■■□□□ 1.92
AP1S3-207ENST00000444408 FANCAO15360 1455 aa27.02■■□□□ 1.92
AP1S3-207ENST00000444408 LRRC9Q6ZRR7 1453 aa27■■□□□ 1.91
AP1S3-207ENST00000444408 MYO5CQ9NQX4 1742 aa27■■□□□ 1.91
AP1S3-207ENST00000444408 MAP3K1Q13233 1512 aa27■■□□□ 1.91
AP1S3-207ENST00000444408 NEO1Q92859 1461 aa27■■□□□ 1.91
AP1S3-207ENST00000444408 AKNAQ7Z591 1439 aa26.98■■□□□ 1.91
AP1S3-207ENST00000444408 ARHGAP5Q13017 1502 aa26.95■■□□□ 1.91
AP1S3-207ENST00000444408 GPATCH8Q9UKJ3 1502 aaKnown RBP26.95■■□□□ 1.91
AP1S3-207ENST00000444408 APLP2Q06481 763 aa26.95■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms