RNA–Protein interactions for RNA: ENST00000443945.6

LRCH1-204, Transcript of leucine rich repeats and calponin homology domain containing 1, humanhuman

TSL 1 (best)

Gene LRCH1, Length 2,070 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1-204ENST00000443945 FAM9AQ8IZU1 332 aaPredicted RBP30.4■■■□□ 2.46
LRCH1-204ENST00000443945 RAPGEF2Q9Y4G8 1499 aa30.39■■■□□ 2.46
LRCH1-204ENST00000443945 SHROOM2Q13796 1616 aa30.37■■■□□ 2.45
LRCH1-204ENST00000443945 JPH4Q96JJ6 628 aa30.36■■■□□ 2.45
LRCH1-204ENST00000443945 KIAA0586Q9BVV6 1533 aa30.34■■■□□ 2.45
LRCH1-204ENST00000443945 CSRNP3Q8WYN3 585 aa30.31■■■□□ 2.44
LRCH1-204ENST00000443945 PRG4Q92954 1404 aaPredicted RBP30.31■■■□□ 2.44
LRCH1-204ENST00000443945 PRXQ9BXM0 1461 aa30.3■■■□□ 2.44
LRCH1-204ENST00000443945 EEA1Q15075 1411 aa30.24■■■□□ 2.43
LRCH1-204ENST00000443945 IQGAP2Q13576 1575 aa30.2■■■□□ 2.42
LRCH1-204ENST00000443945 EHMT2Q96KQ7 1210 aa30.11■■■□□ 2.41
LRCH1-204ENST00000443945 CTTNBP2Q8WZ74 1663 aa30.1■■■□□ 2.41
LRCH1-204ENST00000443945 TTBK1Q5TCY1 1321 aaPredicted RBP30.09■■■□□ 2.41
LRCH1-204ENST00000443945 DISP1Q96F81 1524 aa30.01■■■□□ 2.39
LRCH1-204ENST00000443945 UGGT2Q9NYU1 1516 aa30■■■□□ 2.39
LRCH1-204ENST00000443945 CARMIL2Q6F5E8 1435 aa30■■■□□ 2.39
LRCH1-204ENST00000443945 KIF21BO75037 1637 aa29.98■■■□□ 2.39
LRCH1-204ENST00000443945 RANGAP1P46060 587 aaPredicted RBP29.93■■■□□ 2.38
LRCH1-204ENST00000443945 PTPRGP23470 1445 aa29.93■■■□□ 2.38
LRCH1-204ENST00000443945 KIAA0556O60303 1618 aa29.92■■■□□ 2.38
LRCH1-204ENST00000443945 TNIKQ9UKE5 1360 aa29.92■■■□□ 2.38
LRCH1-204ENST00000443945 P3H3Q8IVL6 736 aa29.85■■■□□ 2.37
LRCH1-204ENST00000443945 UBTFP17480 764 aaKnown RBP29.84■■■□□ 2.37
LRCH1-204ENST00000443945 ADCY10Q96PN6 1610 aa29.84■■■□□ 2.37
LRCH1-204ENST00000443945 TRHP20396 242 aaPredicted RBP29.83■■■□□ 2.37
LRCH1-204ENST00000443945 GOLGA3Q08378 1498 aa29.83■■■□□ 2.37
LRCH1-204ENST00000443945 SAMD9Q5K651 1589 aa29.72■■■□□ 2.35
LRCH1-204ENST00000443945 UACAQ9BZF9 1416 aa29.72■■■□□ 2.35
LRCH1-204ENST00000443945 NPM1P06748 294 aaKnown RBP eCLIP29.71■■■□□ 2.35
LRCH1-204ENST00000443945 PLB1Q6P1J6 1458 aa29.69■■■□□ 2.34
LRCH1-204ENST00000443945 ABCC2Q92887 1545 aa29.65■■■□□ 2.34
LRCH1-204ENST00000443945 FHOD3Q2V2M9 1422 aa29.64■■■□□ 2.34
LRCH1-204ENST00000443945 UHRF1BP1LA0JNW5 1464 aa29.62■■■□□ 2.33
LRCH1-204ENST00000443945 ABCA8O94911 1581 aa29.58■■■□□ 2.33
LRCH1-204ENST00000443945 MAPKBP1O60336 1514 aa29.57■■■□□ 2.32
LRCH1-204ENST00000443945 ARID3CA6NKF2 412 aa29.56■■■□□ 2.32
LRCH1-204ENST00000443945 EFCAB5A4FU69 1503 aa29.55■■■□□ 2.32
LRCH1-204ENST00000443945 KDM5BQ9UGL1 1544 aa29.53■■■□□ 2.32
LRCH1-204ENST00000443945 ZCCHC11Q5TAX3 1644 aaKnown RBP29.51■■■□□ 2.31
LRCH1-204ENST00000443945 ARHGAP35Q9NRY4 1499 aa29.5■■■□□ 2.31
LRCH1-204ENST00000443945 ASXL2Q76L83 1435 aa29.48■■■□□ 2.31
LRCH1-204ENST00000443945 KIF13AQ9H1H9 1805 aa29.48■■■□□ 2.31
LRCH1-204ENST00000443945 FAM69CQ0P6D2 419 aa29.47■■■□□ 2.31
LRCH1-204ENST00000443945 ABCC10Q5T3U5 1492 aa29.46■■■□□ 2.31
LRCH1-204ENST00000443945 LOC105371045A0A1W2PR82 267 aa29.44■■■□□ 2.3
LRCH1-204ENST00000443945 RAPGEF6Q8TEU7 1601 aa29.44■■■□□ 2.3
LRCH1-204ENST00000443945 DIP2BQ9P265 1576 aa29.44■■■□□ 2.3
LRCH1-204ENST00000443945 ATP10BO94823 1461 aa29.37■■■□□ 2.29
LRCH1-204ENST00000443945 NUP153P49790 1475 aaKnown RBP29.37■■■□□ 2.29
LRCH1-204ENST00000443945 CLIP1P30622 1438 aa29.34■■■□□ 2.29
LRCH1-204ENST00000443945 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.33■■■□□ 2.29
LRCH1-204ENST00000443945 HNRNPUL2Q1KMD3 747 aaKnown RBP29.33■■■□□ 2.29
LRCH1-204ENST00000443945 WDR7Q9Y4E6 1490 aa29.31■■■□□ 2.28
LRCH1-204ENST00000443945 ATP1B4Q9UN42 357 aaPredicted RBP29.31■■■□□ 2.28
LRCH1-204ENST00000443945 FMN1Q68DA7 1419 aa29.3■■■□□ 2.28
LRCH1-204ENST00000443945 EPRSP07814 1512 aaKnown RBP29.29■■■□□ 2.28
LRCH1-204ENST00000443945 KCNH8Q96L42 1107 aa29.29■■■□□ 2.28
LRCH1-204ENST00000443945 TSPOAP1O95153 1857 aa29.26■■■□□ 2.28
LRCH1-204ENST00000443945 CEP162Q5TB80 1403 aa29.24■■■□□ 2.27
LRCH1-204ENST00000443945 CDK13Q14004 1512 aaKnown RBP29.22■■■□□ 2.27
LRCH1-204ENST00000443945 GLI2P10070 1586 aa29.2■■■□□ 2.27
LRCH1-204ENST00000443945 HECW1Q76N89 1606 aa29.17■■■□□ 2.26
LRCH1-204ENST00000443945 PCF11O94913 1555 aaKnown RBP29.16■■■□□ 2.26
LRCH1-204ENST00000443945 MAP3K4Q9Y6R4 1608 aa29.13■■■□□ 2.25
LRCH1-204ENST00000443945 PPRC1Q5VV67 1664 aaKnown RBP29.12■■■□□ 2.25
LRCH1-204ENST00000443945 LRRIQ1Q96JM4 1722 aa29.11■■■□□ 2.25
LRCH1-204ENST00000443945 PLEKHD1A6NEE1 506 aa29.09■■■□□ 2.25
LRCH1-204ENST00000443945 CASKIN1Q8WXD9 1431 aa29.09■■■□□ 2.25
LRCH1-204ENST00000443945 CD109Q6YHK3 1445 aa29.06■■■□□ 2.24
LRCH1-204ENST00000443945 CFAP43Q8NDM7 1665 aa29.02■■■□□ 2.24
LRCH1-204ENST00000443945 FYCO1Q9BQS8 1478 aa29.02■■■□□ 2.24
LRCH1-204ENST00000443945 ABCA9Q8IUA7 1624 aa28.98■■■□□ 2.23
LRCH1-204ENST00000443945 KDM6BO15054 1643 aa28.96■■■□□ 2.23
LRCH1-204ENST00000443945 TEX14Q8IWB6 1497 aa28.95■■■□□ 2.22
LRCH1-204ENST00000443945 CDK11AQ9UQ88 783 aaPredicted RBP28.94■■■□□ 2.22
LRCH1-204ENST00000443945 CCDC18Q5T9S5 1454 aa28.94■■■□□ 2.22
LRCH1-204ENST00000443945 MAGI3Q5TCQ9 1506 aa28.93■■■□□ 2.22
LRCH1-204ENST00000443945 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.93■■■□□ 2.229e-7■■■□□ 17.5
LRCH1-204ENST00000443945 TTC37Q6PGP7 1564 aa28.92■■■□□ 2.22
LRCH1-204ENST00000443945 COL17A1Q9UMD9 1497 aaPredicted RBP28.9■■■□□ 2.22
LRCH1-204ENST00000443945 KIF14Q15058 1648 aa28.9■■■□□ 2.22
LRCH1-204ENST00000443945 TROQ12816 1431 aaPredicted RBP28.89■■■□□ 2.22
LRCH1-204ENST00000443945 VPS8Q8N3P4 1428 aa28.84■■■□□ 2.21
LRCH1-204ENST00000443945 FANCAO15360 1455 aa28.74■■■□□ 2.19
LRCH1-204ENST00000443945 MTUS2Q5JR59 1369 aa28.73■■■□□ 2.19
LRCH1-204ENST00000443945 PLCH2O75038 1416 aa28.72■■■□□ 2.19
LRCH1-204ENST00000443945 NEO1Q92859 1461 aa28.72■■■□□ 2.19
LRCH1-204ENST00000443945 MYO5CQ9NQX4 1742 aa28.71■■■□□ 2.19
LRCH1-204ENST00000443945 RAPGEF3O95398 923 aa28.69■■■□□ 2.18
LRCH1-204ENST00000443945 ARAP3Q8WWN8 1544 aa28.68■■■□□ 2.18
LRCH1-204ENST00000443945 AKNAQ7Z591 1439 aa28.68■■■□□ 2.18
LRCH1-204ENST00000443945 TIAM1Q13009 1591 aa28.66■■■□□ 2.18
LRCH1-204ENST00000443945 ARHGAP5Q13017 1502 aa28.65■■■□□ 2.18
LRCH1-204ENST00000443945 PHLDB1Q86UU1 1377 aa28.63■■■□□ 2.17
LRCH1-204ENST00000443945 CFAP74Q9C0B2 1584 aa28.62■■■□□ 2.17
LRCH1-204ENST00000443945 EHBP1L1Q8N3D4 1523 aa28.62■■■□□ 2.17
LRCH1-204ENST00000443945 CDC42BPBQ9Y5S2 1711 aa28.62■■■□□ 2.17
LRCH1-204ENST00000443945 EFCAB2Q5VUJ9 269 aa28.61■■■□□ 2.17
LRCH1-204ENST00000443945 CDC42BPAQ5VT25 1732 aa28.59■■■□□ 2.17
LRCH1-204ENST00000443945 PREX2Q70Z35 1606 aa28.59■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms