RNA–Protein interactions for RNA: ENST00000443943.5

AP1S1-203, Transcript of adaptor related protein complex 1 subunit sigma 1, humanhuman

TSL 3

Gene AP1S1, Length 741 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1-203ENST00000443943 IGF1RP08069 1367 aa36.34■■■■□ 3.41
AP1S1-203ENST00000443943 CUL7Q14999 1698 aa36.29■■■■□ 3.4
AP1S1-203ENST00000443943 KIAA0586Q9BVV6 1533 aa36.24■■■■□ 3.39
AP1S1-203ENST00000443943 CARMIL1Q5VZK9 1371 aa36.12■■■■□ 3.37
AP1S1-203ENST00000443943 KIF13AQ9H1H9 1805 aa36.06■■■■□ 3.36
AP1S1-203ENST00000443943 NPM1P06748 294 aaKnown RBP eCLIP36.05■■■■□ 3.36
AP1S1-203ENST00000443943 ADCY10Q96PN6 1610 aa36.05■■■■□ 3.36
AP1S1-203ENST00000443943 MAPKBP1O60336 1514 aa36■■■■□ 3.35
AP1S1-203ENST00000443943 ABCC10Q5T3U5 1492 aa35.97■■■■□ 3.35
AP1S1-203ENST00000443943 FAM69CQ0P6D2 419 aa35.94■■■■□ 3.34
AP1S1-203ENST00000443943 PTPRGP23470 1445 aa35.91■■■■□ 3.34
AP1S1-203ENST00000443943 AEBP2Q6ZN18 517 aaPredicted RBP35.9■■■■□ 3.34
AP1S1-203ENST00000443943 IQGAP2Q13576 1575 aa35.89■■■■□ 3.34
AP1S1-203ENST00000443943 CARMIL2Q6F5E8 1435 aa35.89■■■■□ 3.34
AP1S1-203ENST00000443943 DIP2BQ9P265 1576 aa35.89■■■■□ 3.34
AP1S1-203ENST00000443943 TTBK1Q5TCY1 1321 aaPredicted RBP35.86■■■■□ 3.33
AP1S1-203ENST00000443943 TNIKQ9UKE5 1360 aa35.84■■■■□ 3.33
AP1S1-203ENST00000443943 RAPGEF2Q9Y4G8 1499 aa35.8■■■■□ 3.32
AP1S1-203ENST00000443943 DISP1Q96F81 1524 aa35.73■■■■□ 3.31
AP1S1-203ENST00000443943 ABCC2Q92887 1545 aa35.72■■■■□ 3.31
AP1S1-203ENST00000443943 UGGT2Q9NYU1 1516 aa35.66■■■■□ 3.3
AP1S1-203ENST00000443943 UHRF1BP1LA0JNW5 1464 aa35.64■■■■□ 3.3
AP1S1-203ENST00000443943 UACAQ9BZF9 1416 aa35.63■■■■□ 3.29
AP1S1-203ENST00000443943 ASXL2Q76L83 1435 aa35.6■■■■□ 3.29
AP1S1-203ENST00000443943 KDM6BO15054 1643 aa35.57■■■■□ 3.29
AP1S1-203ENST00000443943 KIAA0556O60303 1618 aa35.57■■■■□ 3.29
AP1S1-203ENST00000443943 PLB1Q6P1J6 1458 aa35.57■■■■□ 3.28
AP1S1-203ENST00000443943 TSPOAP1O95153 1857 aa35.56■■■■□ 3.28
AP1S1-203ENST00000443943 KDM5BQ9UGL1 1544 aa35.48■■■■□ 3.27
AP1S1-203ENST00000443943 CTTNBP2Q8WZ74 1663 aa35.47■■■■□ 3.27
AP1S1-203ENST00000443943 GLI2P10070 1586 aa35.47■■■■□ 3.27
AP1S1-203ENST00000443943 PRXQ9BXM0 1461 aa35.43■■■■□ 3.26
AP1S1-203ENST00000443943 ZCCHC11Q5TAX3 1644 aaKnown RBP35.4■■■■□ 3.26
AP1S1-203ENST00000443943 GOLGA3Q08378 1498 aa35.38■■■■□ 3.25
AP1S1-203ENST00000443943 EPRSP07814 1512 aaKnown RBP35.37■■■■□ 3.25
AP1S1-203ENST00000443943 PPRC1Q5VV67 1664 aaKnown RBP35.37■■■■□ 3.25
AP1S1-203ENST00000443943 MAP3K4Q9Y6R4 1608 aa35.28■■■■□ 3.24
AP1S1-203ENST00000443943 WDR7Q9Y4E6 1490 aa35.26■■■■□ 3.23
AP1S1-203ENST00000443943 ABCA8O94911 1581 aa35.24■■■■□ 3.23
AP1S1-203ENST00000443943 TEX14Q8IWB6 1497 aa35.2■■■■□ 3.23
AP1S1-203ENST00000443943 KDM4FA0A1W2PPD8 638 aa35.18■■■■□ 3.22
AP1S1-203ENST00000443943 COL17A1Q9UMD9 1497 aaPredicted RBP35.15■■■■□ 3.22
AP1S1-203ENST00000443943 CSRNP3Q8WYN3 585 aa35.14■■■■□ 3.22
AP1S1-203ENST00000443943 P3H3Q8IVL6 736 aa35.08■■■■□ 3.21
AP1S1-203ENST00000443943 KCNH8Q96L42 1107 aa35.05■■■■□ 3.2
AP1S1-203ENST00000443943 FAM9AQ8IZU1 332 aaPredicted RBP35.03■■■■□ 3.2
AP1S1-203ENST00000443943 CD109Q6YHK3 1445 aa35.03■■■■□ 3.2
AP1S1-203ENST00000443943 EEA1Q15075 1411 aa35.01■■■■□ 3.2
AP1S1-203ENST00000443943 ARID3CA6NKF2 412 aa35■■■■□ 3.19
AP1S1-203ENST00000443943 CFAP43Q8NDM7 1665 aa35■■■■□ 3.19
AP1S1-203ENST00000443943 MAGI3Q5TCQ9 1506 aa35■■■■□ 3.19
AP1S1-203ENST00000443943 SAMD9Q5K651 1589 aa35■■■■□ 3.19
AP1S1-203ENST00000443943 ADGRL1O94910 1474 aa34.96■■■■□ 3.19
AP1S1-203ENST00000443943 ATP10BO94823 1461 aa34.94■■■■□ 3.18
AP1S1-203ENST00000443943 RAPGEF6Q8TEU7 1601 aa34.86■■■■□ 3.17
AP1S1-203ENST00000443943 RANGAP1P46060 587 aaPredicted RBP34.85■■■■□ 3.17
AP1S1-203ENST00000443943 FHOD3Q2V2M9 1422 aa34.8■■■■□ 3.16
AP1S1-203ENST00000443943 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP34.76■■■■□ 3.16
AP1S1-203ENST00000443943 HNRNPUL2Q1KMD3 747 aaKnown RBP34.76■■■■□ 3.16
AP1S1-203ENST00000443943 ABCA9Q8IUA7 1624 aa34.75■■■■□ 3.15
AP1S1-203ENST00000443943 NUP153P49790 1475 aaKnown RBP34.75■■■■□ 3.15
AP1S1-203ENST00000443943 KIF21BO75037 1637 aa34.73■■■■□ 3.15
AP1S1-203ENST00000443943 ARAP3Q8WWN8 1544 aa34.71■■■■□ 3.15
AP1S1-203ENST00000443943 EFCAB5A4FU69 1503 aa34.66■■■■□ 3.14
AP1S1-203ENST00000443943 PHLDB1Q86UU1 1377 aa34.63■■■■□ 3.13
AP1S1-203ENST00000443943 NEO1Q92859 1461 aa34.59■■■■□ 3.13
AP1S1-203ENST00000443943 PLEKHD1A6NEE1 506 aa34.53■■■■□ 3.12
AP1S1-203ENST00000443943 EHMT2Q96KQ7 1210 aa34.53■■■■□ 3.12
AP1S1-203ENST00000443943 RAPGEF3O95398 923 aa34.52■■■■□ 3.12
AP1S1-203ENST00000443943 CHIC1Q5VXU3 224 aa34.49■■■■□ 3.11
AP1S1-203ENST00000443943 UBTFP17480 764 aaKnown RBP34.48■■■■□ 3.11
AP1S1-203ENST00000443943 HECW2Q9P2P5 1572 aa34.46■■■■□ 3.11
AP1S1-203ENST00000443943 FRMPD1Q5SYB0 1578 aa34.45■■■■□ 3.11
AP1S1-203ENST00000443943 CDK13Q14004 1512 aaKnown RBP34.43■■■■□ 3.1
AP1S1-203ENST00000443943 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP34.42■■■■□ 3.1
AP1S1-203ENST00000443943 TTC37Q6PGP7 1564 aa34.39■■■■□ 3.1
AP1S1-203ENST00000443943 FANCAO15360 1455 aa34.38■■■■□ 3.09
AP1S1-203ENST00000443943 DENND4BO75064 1496 aaPredicted RBP34.36■■■■□ 3.09
AP1S1-203ENST00000443943 FMN1Q68DA7 1419 aa34.36■■■■□ 3.09
AP1S1-203ENST00000443943 AKNAQ7Z591 1439 aa34.36■■■■□ 3.09
AP1S1-203ENST00000443943 ARHGAP35Q9NRY4 1499 aa34.35■■■■□ 3.09
AP1S1-203ENST00000443943 CFAP74Q9C0B2 1584 aa34.35■■■■□ 3.09
AP1S1-203ENST00000443943 HECW1Q76N89 1606 aa34.31■■■■□ 3.08
AP1S1-203ENST00000443943 ATP1B4Q9UN42 357 aaPredicted RBP34.31■■■■□ 3.08
AP1S1-203ENST00000443943 ARHGEF40Q8TER5 1519 aa34.3■■■■□ 3.08
AP1S1-203ENST00000443943 ADAMTSL3P82987 1691 aa34.28■■■■□ 3.08
AP1S1-203ENST00000443943 ARID4BQ4LE39 1312 aaPredicted RBP34.28■■■■□ 3.08
AP1S1-203ENST00000443943 RICTORQ6R327 1708 aa34.27■■■■□ 3.08
AP1S1-203ENST00000443943 PTPRMP28827 1452 aa34.25■■■■□ 3.07
AP1S1-203ENST00000443943 BCORL1Q5H9F3 1711 aa34.22■■■■□ 3.07
AP1S1-203ENST00000443943 PLCH2O75038 1416 aa34.2■■■■□ 3.06
AP1S1-203ENST00000443943 ZMYM4Q5VZL5 1548 aa34.2■■■■□ 3.06
AP1S1-203ENST00000443943 MADDQ8WXG6 1647 aa34.17■■■■□ 3.06
AP1S1-203ENST00000443943 CDK11AQ9UQ88 783 aaPredicted RBP34.17■■■■□ 3.06
AP1S1-203ENST00000443943 ZFYVE16Q7Z3T8 1539 aa34.15■■■■□ 3.06
AP1S1-203ENST00000443943 SCAPERQ9BY12 1400 aa34.13■■■■□ 3.05
AP1S1-203ENST00000443943 YEATS2Q9ULM3 1422 aa34.13■■■■□ 3.05
AP1S1-203ENST00000443943 POGZQ7Z3K3 1410 aa34.12■■■■□ 3.05
AP1S1-203ENST00000443943 ILDR1Q86SU0 546 aaPredicted RBP34.11■■■■□ 3.05
AP1S1-203ENST00000443943 TROQ12816 1431 aaPredicted RBP34.11■■■■□ 3.05
Retrieved 100 of 20,778 RNA–protein pairs in 8605.7 ms