RNA–Protein interactions for RNA: ENST00000443878.1

RAB5A-204, Transcript of RAB5A, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5A, Length 753 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5A-204ENST00000443878 JPH4Q96JJ6 628 aa35.86■■■■□ 3.33
RAB5A-204ENST00000443878 KIAA0586Q9BVV6 1533 aa35.82■■■■□ 3.32
RAB5A-204ENST00000443878 PRG4Q92954 1404 aaPredicted RBP35.8■■■■□ 3.32
RAB5A-204ENST00000443878 RAPGEF2Q9Y4G8 1499 aa35.67■■■■□ 3.3
RAB5A-204ENST00000443878 TRHP20396 242 aaPredicted RBP35.61■■■■□ 3.29
RAB5A-204ENST00000443878 IQGAP2Q13576 1575 aa35.56■■■■□ 3.28
RAB5A-204ENST00000443878 CARMIL2Q6F5E8 1435 aa35.48■■■■□ 3.27
RAB5A-204ENST00000443878 PRXQ9BXM0 1461 aa35.44■■■■□ 3.26
RAB5A-204ENST00000443878 EEA1Q15075 1411 aa35.39■■■■□ 3.26
RAB5A-204ENST00000443878 UGGT2Q9NYU1 1516 aa35.37■■■■□ 3.25
RAB5A-204ENST00000443878 TNIKQ9UKE5 1360 aa35.36■■■■□ 3.25
RAB5A-204ENST00000443878 PTPRGP23470 1445 aa35.35■■■■□ 3.25
RAB5A-204ENST00000443878 CTTNBP2Q8WZ74 1663 aa35.35■■■■□ 3.25
RAB5A-204ENST00000443878 CSRNP3Q8WYN3 585 aa35.33■■■■□ 3.25
RAB5A-204ENST00000443878 NPM1P06748 294 aaKnown RBP eCLIP35.31■■■■□ 3.24
RAB5A-204ENST00000443878 ADCY10Q96PN6 1610 aa35.3■■■■□ 3.24
RAB5A-204ENST00000443878 DISP1Q96F81 1524 aa35.3■■■■□ 3.24
RAB5A-204ENST00000443878 KIAA0556O60303 1618 aa35.21■■■■□ 3.23
RAB5A-204ENST00000443878 MAPKBP1O60336 1514 aa35.2■■■■□ 3.23
RAB5A-204ENST00000443878 GOLGA3Q08378 1498 aa35.18■■■■□ 3.22
RAB5A-204ENST00000443878 CHIC1Q5VXU3 224 aa35.18■■■■□ 3.22
RAB5A-204ENST00000443878 TTBK1Q5TCY1 1321 aaPredicted RBP35.17■■■■□ 3.22
RAB5A-204ENST00000443878 UHRF1BP1LA0JNW5 1464 aa35.12■■■■□ 3.21
RAB5A-204ENST00000443878 UACAQ9BZF9 1416 aa35.11■■■■□ 3.21
RAB5A-204ENST00000443878 ABCC2Q92887 1545 aa35.09■■■■□ 3.21
RAB5A-204ENST00000443878 KIF13AQ9H1H9 1805 aa35.07■■■■□ 3.2
RAB5A-204ENST00000443878 ABCC10Q5T3U5 1492 aa35.06■■■■□ 3.2
RAB5A-204ENST00000443878 FAM9AQ8IZU1 332 aaPredicted RBP35.04■■■■□ 3.2
RAB5A-204ENST00000443878 KIF21BO75037 1637 aa34.99■■■■□ 3.19
RAB5A-204ENST00000443878 FAM69CQ0P6D2 419 aa34.98■■■■□ 3.19
RAB5A-204ENST00000443878 DIP2BQ9P265 1576 aa34.97■■■■□ 3.19
RAB5A-204ENST00000443878 KDM5BQ9UGL1 1544 aa34.93■■■■□ 3.18
RAB5A-204ENST00000443878 PLB1Q6P1J6 1458 aa34.91■■■■□ 3.18
RAB5A-204ENST00000443878 ASXL2Q76L83 1435 aa34.88■■■■□ 3.17
RAB5A-204ENST00000443878 SAMD9Q5K651 1589 aa34.87■■■■□ 3.17
RAB5A-204ENST00000443878 ABCA8O94911 1581 aa34.85■■■■□ 3.17
RAB5A-204ENST00000443878 ZCCHC11Q5TAX3 1644 aaKnown RBP34.84■■■■□ 3.17
RAB5A-204ENST00000443878 P3H3Q8IVL6 736 aa34.78■■■■□ 3.16
RAB5A-204ENST00000443878 GLI2P10070 1586 aa34.75■■■■□ 3.15
RAB5A-204ENST00000443878 EFCAB5A4FU69 1503 aa34.69■■■■□ 3.14
RAB5A-204ENST00000443878 UBTFP17480 764 aaKnown RBP34.68■■■■□ 3.14
RAB5A-204ENST00000443878 EPRSP07814 1512 aaKnown RBP34.67■■■■□ 3.14
RAB5A-204ENST00000443878 WDR7Q9Y4E6 1490 aa34.67■■■■□ 3.14
RAB5A-204ENST00000443878 TSPOAP1O95153 1857 aa34.67■■■■□ 3.14
RAB5A-204ENST00000443878 RANGAP1P46060 587 aaPredicted RBP34.66■■■■□ 3.14
RAB5A-204ENST00000443878 RAPGEF6Q8TEU7 1601 aa34.61■■■■□ 3.13
RAB5A-204ENST00000443878 FHOD3Q2V2M9 1422 aa34.6■■■■□ 3.13
RAB5A-204ENST00000443878 EHMT2Q96KQ7 1210 aa34.57■■■■□ 3.12
RAB5A-204ENST00000443878 MAP3K4Q9Y6R4 1608 aa34.55■■■■□ 3.12
RAB5A-204ENST00000443878 ATP10BO94823 1461 aa34.55■■■■□ 3.12
RAB5A-204ENST00000443878 KDM6BO15054 1643 aa34.52■■■■□ 3.12
RAB5A-204ENST00000443878 PPRC1Q5VV67 1664 aaKnown RBP34.51■■■■□ 3.12
RAB5A-204ENST00000443878 TEX14Q8IWB6 1497 aa34.48■■■■□ 3.11
RAB5A-204ENST00000443878 ARID3CA6NKF2 412 aa34.45■■■■□ 3.11
RAB5A-204ENST00000443878 NUP153P49790 1475 aaKnown RBP34.45■■■■□ 3.1
RAB5A-204ENST00000443878 KCNH8Q96L42 1107 aa34.44■■■■□ 3.1
RAB5A-204ENST00000443878 CFAP43Q8NDM7 1665 aa34.44■■■■□ 3.1
RAB5A-204ENST00000443878 ARHGAP35Q9NRY4 1499 aa34.39■■■■□ 3.1
RAB5A-204ENST00000443878 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP34.39■■■■□ 3.1
RAB5A-204ENST00000443878 HNRNPUL2Q1KMD3 747 aaKnown RBP34.39■■■■□ 3.1
RAB5A-204ENST00000443878 CD109Q6YHK3 1445 aa34.38■■■■□ 3.09
RAB5A-204ENST00000443878 FMN1Q68DA7 1419 aa34.38■■■■□ 3.09
RAB5A-204ENST00000443878 MAGI3Q5TCQ9 1506 aa34.35■■■■□ 3.09
RAB5A-204ENST00000443878 ABCA9Q8IUA7 1624 aa34.27■■■■□ 3.08
RAB5A-204ENST00000443878 PLEKHD1A6NEE1 506 aa34.27■■■■□ 3.08
RAB5A-204ENST00000443878 HECW1Q76N89 1606 aa34.24■■■■□ 3.07
RAB5A-204ENST00000443878 COL17A1Q9UMD9 1497 aaPredicted RBP34.19■■■■□ 3.06
RAB5A-204ENST00000443878 CDK13Q14004 1512 aaKnown RBP34.14■■■■□ 3.06
RAB5A-204ENST00000443878 ATP1B4Q9UN42 357 aaPredicted RBP34.14■■■■□ 3.06
RAB5A-204ENST00000443878 PHLDB1Q86UU1 1377 aa34.13■■■■□ 3.05
RAB5A-204ENST00000443878 AEBP2Q6ZN18 517 aaPredicted RBP34.11■■■■□ 3.05
RAB5A-204ENST00000443878 CLIP1P30622 1438 aa34.1■■■■□ 3.05
RAB5A-204ENST00000443878 CDK11AQ9UQ88 783 aaPredicted RBP34.09■■■■□ 3.05
RAB5A-204ENST00000443878 ARAP3Q8WWN8 1544 aa34.07■■■■□ 3.04
RAB5A-204ENST00000443878 NEO1Q92859 1461 aa34.06■■■■□ 3.04
RAB5A-204ENST00000443878 CASKIN1Q8WXD9 1431 aa34.04■■■■□ 3.04
RAB5A-204ENST00000443878 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP34.03■■■■□ 3.04
RAB5A-204ENST00000443878 PCF11O94913 1555 aaKnown RBP33.99■■■■□ 3.03
RAB5A-204ENST00000443878 CCDC18Q5T9S5 1454 aa33.98■■■■□ 3.03
RAB5A-204ENST00000443878 TTC37Q6PGP7 1564 aa33.96■■■■□ 3.03
RAB5A-204ENST00000443878 FYCO1Q9BQS8 1478 aa33.95■■■■□ 3.03
RAB5A-204ENST00000443878 CFAP74Q9C0B2 1584 aa33.95■■■■□ 3.03
RAB5A-204ENST00000443878 LRRIQ1Q96JM4 1722 aa33.95■■■■□ 3.03
RAB5A-204ENST00000443878 TROQ12816 1431 aaPredicted RBP33.94■■■■□ 3.02
RAB5A-204ENST00000443878 KIF14Q15058 1648 aa33.9■■■■□ 3.02
RAB5A-204ENST00000443878 FANCAO15360 1455 aa33.89■■■■□ 3.02
RAB5A-204ENST00000443878 PLCH2O75038 1416 aa33.86■■■■□ 3.01
RAB5A-204ENST00000443878 CEP162Q5TB80 1403 aa33.85■■■■□ 3.01
RAB5A-204ENST00000443878 AKNAQ7Z591 1439 aa33.85■■■■□ 3.01
RAB5A-204ENST00000443878 KDM4FA0A1W2PPD8 638 aa33.82■■■■□ 3
RAB5A-204ENST00000443878 MYO5CQ9NQX4 1742 aa33.82■■■■□ 3
RAB5A-204ENST00000443878 RAPGEF3O95398 923 aa33.8■■■■□ 3
RAB5A-204ENST00000443878 DENND4BO75064 1496 aaPredicted RBP33.8■■■■□ 3
RAB5A-204ENST00000443878 FRMPD1Q5SYB0 1578 aa33.76■■■□□ 2.99
RAB5A-204ENST00000443878 ADGRL1O94910 1474 aa33.76■■■□□ 2.99
RAB5A-204ENST00000443878 EFCAB2Q5VUJ9 269 aa33.74■■■□□ 2.99
RAB5A-204ENST00000443878 RICTORQ6R327 1708 aa33.73■■■□□ 2.99
RAB5A-204ENST00000443878 LOC105371045A0A1W2PR82 267 aa33.69■■■□□ 2.98
RAB5A-204ENST00000443878 ARHGAP5Q13017 1502 aa33.67■■■□□ 2.98
RAB5A-204ENST00000443878 SCAPERQ9BY12 1400 aa33.65■■■□□ 2.98
Retrieved 100 of 20,778 RNA–protein pairs in 92.8 ms