RNA–Protein interactions for RNA: ENST00000443621.1

LINC00393-201, long intergenic non-protein coding RNA 393, humanhuman

TSL 3 BASIC

Gene LINC00393, Length 282 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00393-201ENST00000443621 UGGT2Q9NYU1 1516 aa4.39□□□□□ -1.71
LINC00393-201ENST00000443621 SYNJ2O15056 1496 aa4.38□□□□□ -1.71
LINC00393-201ENST00000443621 EIF4G3O43432 1585 aaKnown RBP4.38□□□□□ -1.71
LINC00393-201ENST00000443621 TDRD9Q8NDG6 1382 aaKnown RBP4.38□□□□□ -1.71
LINC00393-201ENST00000443621 ARAP1Q96P48 1450 aa4.37□□□□□ -1.71
LINC00393-201ENST00000443621 FYCO1Q9BQS8 1478 aa4.37□□□□□ -1.71
LINC00393-201ENST00000443621 APLP2Q06481 763 aa4.37□□□□□ -1.71
LINC00393-201ENST00000443621 ACIN1Q9UKV3 1341 aaKnown RBP4.37□□□□□ -1.71
LINC00393-201ENST00000443621 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP4.37□□□□□ -1.71
LINC00393-201ENST00000443621 CASKIN1Q8WXD9 1431 aa4.37□□□□□ -1.71
LINC00393-201ENST00000443621 GRIN2AQ12879 1464 aa4.37□□□□□ -1.71
LINC00393-201ENST00000443621 IQGAP2Q13576 1575 aa4.36□□□□□ -1.71
LINC00393-201ENST00000443621 NUP160Q12769 1436 aa4.36□□□□□ -1.71
LINC00393-201ENST00000443621 ZEB1P37275 1124 aaPredicted RBP4.35□□□□□ -1.71
LINC00393-201ENST00000443621 CCDC18Q5T9S5 1454 aa4.35□□□□□ -1.71
LINC00393-201ENST00000443621 TIAM1Q13009 1591 aa4.35□□□□□ -1.71
LINC00393-201ENST00000443621 ZNF608Q9ULD9 1512 aaPredicted RBP4.34□□□□□ -1.71
LINC00393-201ENST00000443621 CFAP43Q8NDM7 1665 aa4.34□□□□□ -1.71
LINC00393-201ENST00000443621 SNAPC4Q5SXM2 1469 aa4.33□□□□□ -1.72
LINC00393-201ENST00000443621 CARMIL2Q6F5E8 1435 aa4.33□□□□□ -1.72
LINC00393-201ENST00000443621 RRBP1Q9P2E9 1410 aaKnown RBP4.33□□□□□ -1.72
LINC00393-201ENST00000443621 HRCP23327 699 aa4.33□□□□□ -1.72
LINC00393-201ENST00000443621 LRRC9Q6ZRR7 1453 aa4.32□□□□□ -1.72
LINC00393-201ENST00000443621 CLSPNQ9HAW4 1339 aa4.32□□□□□ -1.72
LINC00393-201ENST00000443621 HECW1Q76N89 1606 aa4.32□□□□□ -1.72
LINC00393-201ENST00000443621 SLC24A1O60721 1099 aa4.31□□□□□ -1.72
LINC00393-201ENST00000443621 CHMP7Q8WUX9 453 aaPredicted RBP4.31□□□□□ -1.72
LINC00393-201ENST00000443621 PCGF6Q9BYE7 350 aa4.31□□□□□ -1.72
LINC00393-201ENST00000443621 KIAA0556O60303 1618 aa4.31□□□□□ -1.72
LINC00393-201ENST00000443621 SHROOM2Q13796 1616 aa4.31□□□□□ -1.72
LINC00393-201ENST00000443621 DISP1Q96F81 1524 aa4.31□□□□□ -1.72
LINC00393-201ENST00000443621 CDK11AQ9UQ88 783 aaPredicted RBP4.3□□□□□ -1.72
LINC00393-201ENST00000443621 PCF11O94913 1555 aaKnown RBP4.3□□□□□ -1.72
LINC00393-201ENST00000443621 CEP170Q5SW79 1584 aa4.3□□□□□ -1.72
LINC00393-201ENST00000443621 ARHGEF11O15085 1522 aa4.3□□□□□ -1.72
LINC00393-201ENST00000443621 EHBP1L1Q8N3D4 1523 aa4.3□□□□□ -1.72
LINC00393-201ENST00000443621 MIA2Q96PC5 1412 aa4.29□□□□□ -1.72
LINC00393-201ENST00000443621 SUPT6HQ7KZ85 1726 aaKnown RBP4.29□□□□□ -1.72
LINC00393-201ENST00000443621 EPRSP07814 1512 aaKnown RBP4.28□□□□□ -1.72
LINC00393-201ENST00000443621 JPH4Q96JJ6 628 aa4.28□□□□□ -1.72
LINC00393-201ENST00000443621 FHOD3Q2V2M9 1422 aa4.28□□□□□ -1.72
LINC00393-201ENST00000443621 RAPGEF6Q8TEU7 1601 aa4.28□□□□□ -1.72
LINC00393-201ENST00000443621 CCNB3Q8WWL7 1395 aa4.27□□□□□ -1.73
LINC00393-201ENST00000443621 UHRF1BP1LA0JNW5 1464 aa4.27□□□□□ -1.73
LINC00393-201ENST00000443621 ADCY10Q96PN6 1610 aa4.27□□□□□ -1.73
LINC00393-201ENST00000443621 AKNAQ7Z591 1439 aa4.27□□□□□ -1.73
LINC00393-201ENST00000443621 ABCA8O94911 1581 aa4.27□□□□□ -1.73
LINC00393-201ENST00000443621 CLASP1Q7Z460 1538 aa4.26□□□□□ -1.73
LINC00393-201ENST00000443621 MYOM3Q5VTT5 1437 aa4.26□□□□□ -1.73
LINC00393-201ENST00000443621 CHD1O14646 1710 aa4.26□□□□□ -1.73
LINC00393-201ENST00000443621 LRRIQ1Q96JM4 1722 aa4.26□□□□□ -1.73
LINC00393-201ENST00000443621 MTUS2Q5JR59 1369 aa4.26□□□□□ -1.73
LINC00393-201ENST00000443621 NUP153P49790 1475 aaKnown RBP4.25□□□□□ -1.73
LINC00393-201ENST00000443621 TCOF1Q13428 1488 aaKnown RBP4.25□□□□□ -1.73
LINC00393-201ENST00000443621 KANK4Q5T7N3 995 aaPredicted RBP4.25□□□□□ -1.73
LINC00393-201ENST00000443621 EHMT2Q96KQ7 1210 aa4.25□□□□□ -1.73
LINC00393-201ENST00000443621 TIMELESSQ9UNS1 1208 aa4.25□□□□□ -1.73
LINC00393-201ENST00000443621 TROQ12816 1431 aaPredicted RBP4.24□□□□□ -1.73
LINC00393-201ENST00000443621 FGD6Q6ZV73 1430 aa4.24□□□□□ -1.73
LINC00393-201ENST00000443621 RSPH4AQ5TD94 716 aa4.24□□□□□ -1.73
LINC00393-201ENST00000443621 ITSN2Q9NZM3 1697 aa4.24□□□□□ -1.73
LINC00393-201ENST00000443621 NCOA2Q15596 1464 aa4.24□□□□□ -1.73
LINC00393-201ENST00000443621 PTPRGP23470 1445 aa4.23□□□□□ -1.73
LINC00393-201ENST00000443621 PRG4Q92954 1404 aaPredicted RBP4.23□□□□□ -1.73
LINC00393-201ENST00000443621 ARAP3Q8WWN8 1544 aa4.23□□□□□ -1.73
LINC00393-201ENST00000443621 KDM5BQ9UGL1 1544 aa4.23□□□□□ -1.73
LINC00393-201ENST00000443621 ROCK1Q13464 1354 aa4.23□□□□□ -1.73
LINC00393-201ENST00000443621 UACAQ9BZF9 1416 aa4.22□□□□□ -1.73
LINC00393-201ENST00000443621 ABCC2Q92887 1545 aa4.22□□□□□ -1.73
LINC00393-201ENST00000443621 PHLDB1Q86UU1 1377 aa4.22□□□□□ -1.73
LINC00393-201ENST00000443621 ATP10BO94823 1461 aa4.22□□□□□ -1.73
LINC00393-201ENST00000443621 HFM1A2PYH4 1435 aa4.21□□□□□ -1.73
LINC00393-201ENST00000443621 SETD5Q9C0A6 1442 aa4.21□□□□□ -1.73
LINC00393-201ENST00000443621 KIF14Q15058 1648 aa4.21□□□□□ -1.73
LINC00393-201ENST00000443621 PTPN23Q9H3S7 1636 aa4.21□□□□□ -1.73
LINC00393-201ENST00000443621 PLEKHD1A6NEE1 506 aa4.21□□□□□ -1.74
LINC00393-201ENST00000443621 MAGI3Q5TCQ9 1506 aa4.21□□□□□ -1.74
LINC00393-201ENST00000443621 ARHGEF5Q12774 1597 aa4.2□□□□□ -1.74
LINC00393-201ENST00000443621 PLB1Q6P1J6 1458 aa4.2□□□□□ -1.74
LINC00393-201ENST00000443621 PLEKHH2Q8IVE3 1493 aa4.2□□□□□ -1.74
LINC00393-201ENST00000443621 SHANK2Q9UPX8 1470 aa4.2□□□□□ -1.74
LINC00393-201ENST00000443621 FBLN2P98095 1184 aa4.2□□□□□ -1.74
LINC00393-201ENST00000443621 P3H3Q8IVL6 736 aa4.2□□□□□ -1.74
LINC00393-201ENST00000443621 OSCARQ8IYS5 282 aa4.2□□□□□ -1.74
LINC00393-201ENST00000443621 DNMT1P26358 1616 aaKnown RBP4.2□□□□□ -1.74
LINC00393-201ENST00000443621 KIAA1107Q9UPP5 1409 aa4.2□□□□□ -1.74
LINC00393-201ENST00000443621 ADGRL2O95490 1459 aa4.19□□□□□ -1.74
LINC00393-201ENST00000443621 ABCC10Q5T3U5 1492 aa4.19□□□□□ -1.74
LINC00393-201ENST00000443621 RANGAP1P46060 587 aaPredicted RBP4.19□□□□□ -1.74
LINC00393-201ENST00000443621 GPATCH8Q9UKJ3 1502 aaKnown RBP4.19□□□□□ -1.74
LINC00393-201ENST00000443621 GCC2Q8IWJ2 1684 aa4.19□□□□□ -1.74
LINC00393-201ENST00000443621 CDK13Q14004 1512 aaKnown RBP4.18□□□□□ -1.74
LINC00393-201ENST00000443621 CCER1Q8TC90 406 aaPredicted RBP4.18□□□□□ -1.74
LINC00393-201ENST00000443621 MAST1Q9Y2H9 1570 aa4.18□□□□□ -1.74
LINC00393-201ENST00000443621 CDC42BPAQ5VT25 1732 aa4.18□□□□□ -1.74
LINC00393-201ENST00000443621 WDR7Q9Y4E6 1490 aa4.18□□□□□ -1.74
LINC00393-201ENST00000443621 PREX2Q70Z35 1606 aa4.17□□□□□ -1.74
LINC00393-201ENST00000443621 ADGBQ8N7X0 1667 aa4.17□□□□□ -1.74
LINC00393-201ENST00000443621 POTEDQ86YR6 584 aa4.17□□□□□ -1.74
LINC00393-201ENST00000443621 ATP1B4Q9UN42 357 aaPredicted RBP4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms