RNA–Protein interactions for RNA: ENST00000443561.3

PDLIM2-212, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 701 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-212ENST00000443561 PRXQ9BXM0 1461 aa21.8■■□□□ 1.08
PDLIM2-212ENST00000443561 RAPGEF2Q9Y4G8 1499 aa21.77■■□□□ 1.07
PDLIM2-212ENST00000443561 KIAA0586Q9BVV6 1533 aa21.73■■□□□ 1.07
PDLIM2-212ENST00000443561 CTTNBP2Q8WZ74 1663 aa21.7■■□□□ 1.06
PDLIM2-212ENST00000443561 EEA1Q15075 1411 aa21.7■■□□□ 1.06
PDLIM2-212ENST00000443561 IQGAP2Q13576 1575 aa21.67■■□□□ 1.06
PDLIM2-212ENST00000443561 CSRNP3Q8WYN3 585 aa21.64■■□□□ 1.05
PDLIM2-212ENST00000443561 PRG4Q92954 1404 aaPredicted RBP21.63■■□□□ 1.05
PDLIM2-212ENST00000443561 KIF21BO75037 1637 aa21.62■■□□□ 1.05
PDLIM2-212ENST00000443561 JPH4Q96JJ6 628 aa21.61■■□□□ 1.05
PDLIM2-212ENST00000443561 FAM9AQ8IZU1 332 aaPredicted RBP21.6■■□□□ 1.05
PDLIM2-212ENST00000443561 UGGT2Q9NYU1 1516 aa21.57■■□□□ 1.04
PDLIM2-212ENST00000443561 DISP1Q96F81 1524 aa21.56■■□□□ 1.04
PDLIM2-212ENST00000443561 CYB5RLQ6IPT4 315 aa21.55■■□□□ 1.04
PDLIM2-212ENST00000443561 KIAA0556O60303 1618 aa21.51■■□□□ 1.03
PDLIM2-212ENST00000443561 ADCY10Q96PN6 1610 aa21.44■■□□□ 1.02
PDLIM2-212ENST00000443561 SAMD9Q5K651 1589 aa21.43■■□□□ 1.02
PDLIM2-212ENST00000443561 GOLGA3Q08378 1498 aa21.4■■□□□ 1.02
PDLIM2-212ENST00000443561 CARMIL2Q6F5E8 1435 aa21.38■■□□□ 1.01
PDLIM2-212ENST00000443561 TNIKQ9UKE5 1360 aa21.36■■□□□ 1.01
PDLIM2-212ENST00000443561 PTPRGP23470 1445 aa21.33■■□□□ 1.01
PDLIM2-212ENST00000443561 EHMT2Q96KQ7 1210 aa21.31■■□□□ 1
PDLIM2-212ENST00000443561 ABCA8O94911 1581 aa21.28■■□□□ 1
PDLIM2-212ENST00000443561 ABCC2Q92887 1545 aa21.27■■□□□ 1
PDLIM2-212ENST00000443561 UHRF1BP1LA0JNW5 1464 aa21.26■□□□□ 0.99
PDLIM2-212ENST00000443561 PLB1Q6P1J6 1458 aa21.26■□□□□ 0.99
PDLIM2-212ENST00000443561 EFCAB5A4FU69 1503 aa21.24■□□□□ 0.99
PDLIM2-212ENST00000443561 UACAQ9BZF9 1416 aa21.23■□□□□ 0.99
PDLIM2-212ENST00000443561 TTBK1Q5TCY1 1321 aaPredicted RBP21.23■□□□□ 0.99
PDLIM2-212ENST00000443561 FHOD3Q2V2M9 1422 aa21.22■□□□□ 0.99
PDLIM2-212ENST00000443561 ARHGAP35Q9NRY4 1499 aa21.21■□□□□ 0.99
PDLIM2-212ENST00000443561 KIF13AQ9H1H9 1805 aa21.21■□□□□ 0.99
PDLIM2-212ENST00000443561 MAPKBP1O60336 1514 aa21.2■□□□□ 0.98
PDLIM2-212ENST00000443561 ZCCHC11Q5TAX3 1644 aaKnown RBP21.2■□□□□ 0.98
PDLIM2-212ENST00000443561 P3H3Q8IVL6 736 aa21.2■□□□□ 0.98
PDLIM2-212ENST00000443561 UBTFP17480 764 aaKnown RBP21.18■□□□□ 0.98
PDLIM2-212ENST00000443561 KDM5BQ9UGL1 1544 aa21.18■□□□□ 0.98
PDLIM2-212ENST00000443561 RANGAP1P46060 587 aaPredicted RBP21.16■□□□□ 0.98
PDLIM2-212ENST00000443561 RAPGEF6Q8TEU7 1601 aa21.15■□□□□ 0.98
PDLIM2-212ENST00000443561 DIP2BQ9P265 1576 aa21.13■□□□□ 0.97
PDLIM2-212ENST00000443561 NUP153P49790 1475 aaKnown RBP21.08■□□□□ 0.97
PDLIM2-212ENST00000443561 LRRIQ1Q96JM4 1722 aa21.07■□□□□ 0.96
PDLIM2-212ENST00000443561 ABCC10Q5T3U5 1492 aa21.07■□□□□ 0.96
PDLIM2-212ENST00000443561 ASXL2Q76L83 1435 aa21.06■□□□□ 0.96
PDLIM2-212ENST00000443561 ATP10BO94823 1461 aa21.04■□□□□ 0.96
PDLIM2-212ENST00000443561 LOC105371045A0A1W2PR82 267 aa21.03■□□□□ 0.96
PDLIM2-212ENST00000443561 CLIP1P30622 1438 aa21.01■□□□□ 0.95
PDLIM2-212ENST00000443561 TRHP20396 242 aaPredicted RBP21■□□□□ 0.95
PDLIM2-212ENST00000443561 PCF11O94913 1555 aaKnown RBP21■□□□□ 0.95
PDLIM2-212ENST00000443561 PPRC1Q5VV67 1664 aaKnown RBP20.99■□□□□ 0.95
PDLIM2-212ENST00000443561 GLI2P10070 1586 aa20.97■□□□□ 0.95
PDLIM2-212ENST00000443561 CEP162Q5TB80 1403 aa20.97■□□□□ 0.95
PDLIM2-212ENST00000443561 WDR7Q9Y4E6 1490 aa20.97■□□□□ 0.95
PDLIM2-212ENST00000443561 NPM1P06748 294 aaKnown RBP eCLIP20.97■□□□□ 0.95
PDLIM2-212ENST00000443561 EPRSP07814 1512 aaKnown RBP20.97■□□□□ 0.95
PDLIM2-212ENST00000443561 CDK13Q14004 1512 aaKnown RBP20.96■□□□□ 0.95
PDLIM2-212ENST00000443561 ARID3CA6NKF2 412 aa20.95■□□□□ 0.94
PDLIM2-212ENST00000443561 HECW1Q76N89 1606 aa20.95■□□□□ 0.94
PDLIM2-212ENST00000443561 FMN1Q68DA7 1419 aa20.95■□□□□ 0.94
PDLIM2-212ENST00000443561 MAP3K4Q9Y6R4 1608 aa20.94■□□□□ 0.94
PDLIM2-212ENST00000443561 TSPOAP1O95153 1857 aa20.92■□□□□ 0.94
PDLIM2-212ENST00000443561 FAM69CQ0P6D2 419 aa20.88■□□□□ 0.93
PDLIM2-212ENST00000443561 CASKIN1Q8WXD9 1431 aa20.87■□□□□ 0.93
PDLIM2-212ENST00000443561 CFAP43Q8NDM7 1665 aa20.85■□□□□ 0.93
PDLIM2-212ENST00000443561 FYCO1Q9BQS8 1478 aa20.84■□□□□ 0.93
PDLIM2-212ENST00000443561 ABCA9Q8IUA7 1624 aa20.84■□□□□ 0.93
PDLIM2-212ENST00000443561 MAGI3Q5TCQ9 1506 aa20.83■□□□□ 0.92
PDLIM2-212ENST00000443561 TTC37Q6PGP7 1564 aa20.79■□□□□ 0.92
PDLIM2-212ENST00000443561 KIF14Q15058 1648 aa20.78■□□□□ 0.92
PDLIM2-212ENST00000443561 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.77■□□□□ 0.92
PDLIM2-212ENST00000443561 CCDC18Q5T9S5 1454 aa20.74■□□□□ 0.91
PDLIM2-212ENST00000443561 KCNH8Q96L42 1107 aa20.73■□□□□ 0.91
PDLIM2-212ENST00000443561 CD109Q6YHK3 1445 aa20.7■□□□□ 0.9
PDLIM2-212ENST00000443561 VPS8Q8N3P4 1428 aa20.7■□□□□ 0.9
PDLIM2-212ENST00000443561 COL17A1Q9UMD9 1497 aaPredicted RBP20.7■□□□□ 0.9
PDLIM2-212ENST00000443561 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.7■□□□□ 0.9
PDLIM2-212ENST00000443561 HNRNPUL2Q1KMD3 747 aaKnown RBP20.7■□□□□ 0.9
PDLIM2-212ENST00000443561 TROQ12816 1431 aaPredicted RBP20.7■□□□□ 0.9
PDLIM2-212ENST00000443561 ATP1B4Q9UN42 357 aaPredicted RBP20.69■□□□□ 0.9
PDLIM2-212ENST00000443561 KDM6BO15054 1643 aa20.68■□□□□ 0.9
PDLIM2-212ENST00000443561 PLEKHD1A6NEE1 506 aa20.65■□□□□ 0.9
PDLIM2-212ENST00000443561 MYO5CQ9NQX4 1742 aa20.64■□□□□ 0.89
PDLIM2-212ENST00000443561 TEX14Q8IWB6 1497 aa20.63■□□□□ 0.89
PDLIM2-212ENST00000443561 TIAM1Q13009 1591 aa20.63■□□□□ 0.89
PDLIM2-212ENST00000443561 CDC42BPBQ9Y5S2 1711 aa20.61■□□□□ 0.89
PDLIM2-212ENST00000443561 CDC42BPAQ5VT25 1732 aa20.61■□□□□ 0.89
PDLIM2-212ENST00000443561 FRMPD1Q5SYB0 1578 aa20.59■□□□□ 0.89
PDLIM2-212ENST00000443561 PREX2Q70Z35 1606 aa20.58■□□□□ 0.89
PDLIM2-212ENST00000443561 EHBP1L1Q8N3D4 1523 aa20.57■□□□□ 0.88
PDLIM2-212ENST00000443561 ARAP3Q8WWN8 1544 aa20.56■□□□□ 0.88
PDLIM2-212ENST00000443561 NEO1Q92859 1461 aa20.56■□□□□ 0.88
PDLIM2-212ENST00000443561 PLCH2O75038 1416 aa20.54■□□□□ 0.88
PDLIM2-212ENST00000443561 RICTORQ6R327 1708 aa20.53■□□□□ 0.88
PDLIM2-212ENST00000443561 FANCAO15360 1455 aa20.53■□□□□ 0.88
PDLIM2-212ENST00000443561 CFAP74Q9C0B2 1584 aa20.53■□□□□ 0.88
PDLIM2-212ENST00000443561 MAP3K1Q13233 1512 aa20.53■□□□□ 0.88
PDLIM2-212ENST00000443561 CDK11AQ9UQ88 783 aaPredicted RBP20.52■□□□□ 0.88
PDLIM2-212ENST00000443561 LRRC9Q6ZRR7 1453 aa20.49■□□□□ 0.87
PDLIM2-212ENST00000443561 GPATCH8Q9UKJ3 1502 aaKnown RBP20.48■□□□□ 0.87
PDLIM2-212ENST00000443561 MTUS2Q5JR59 1369 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 234.3 ms