RNA–Protein interactions for RNA: ENST00000443438.5

RER1-205, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 2

Gene RER1, Length 540 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-205ENST00000443438 GRIN2BQ13224 1484 aa13.33□□□□□ -0.28
RER1-205ENST00000443438 PBRM1Q86U86 1689 aa13.33□□□□□ -0.28
RER1-205ENST00000443438 FHAD1B1AJZ9 1412 aa13.32□□□□□ -0.28
RER1-205ENST00000443438 PLPPR3Q6T4P5 718 aa13.32□□□□□ -0.28
RER1-205ENST00000443438 HRCP23327 699 aa13.31□□□□□ -0.28
RER1-205ENST00000443438 ADAMTS12P58397 1594 aa13.3□□□□□ -0.28
RER1-205ENST00000443438 CTTNBP2Q8WZ74 1663 aa13.28□□□□□ -0.28
RER1-205ENST00000443438 EFCAB5A4FU69 1503 aa13.26□□□□□ -0.29
RER1-205ENST00000443438 EIF4G3O43432 1585 aaKnown RBP13.26□□□□□ -0.29
RER1-205ENST00000443438 TTBK1Q5TCY1 1321 aaPredicted RBP13.24□□□□□ -0.29
RER1-205ENST00000443438 SAMD9Q5K651 1589 aa13.23□□□□□ -0.29
RER1-205ENST00000443438 SNAPC4Q5SXM2 1469 aa13.23□□□□□ -0.29
RER1-205ENST00000443438 APLP2Q06481 763 aa13.22□□□□□ -0.29
RER1-205ENST00000443438 KANK4Q5T7N3 995 aaPredicted RBP13.22□□□□□ -0.29
RER1-205ENST00000443438 MAP3K1Q13233 1512 aa13.22□□□□□ -0.29
RER1-205ENST00000443438 FHOD3Q2V2M9 1422 aa13.22□□□□□ -0.29
RER1-205ENST00000443438 P3H3Q8IVL6 736 aa13.2□□□□□ -0.3
RER1-205ENST00000443438 MAGI1Q96QZ7 1491 aaPredicted RBP13.19□□□□□ -0.3
RER1-205ENST00000443438 CASKIN1Q8WXD9 1431 aa13.17□□□□□ -0.3
RER1-205ENST00000443438 GRIN2AQ12879 1464 aa13.16□□□□□ -0.3
RER1-205ENST00000443438 PCF11O94913 1555 aaKnown RBP13.16□□□□□ -0.3
RER1-205ENST00000443438 SYNJ2O15056 1496 aa13.16□□□□□ -0.3
RER1-205ENST00000443438 TIAM1Q13009 1591 aa13.15□□□□□ -0.3
RER1-205ENST00000443438 IQGAP2Q13576 1575 aa13.15□□□□□ -0.3
RER1-205ENST00000443438 KIAA0586Q9BVV6 1533 aa13.14□□□□□ -0.31
RER1-205ENST00000443438 UGGT2Q9NYU1 1516 aa13.14□□□□□ -0.31
RER1-205ENST00000443438 FYCO1Q9BQS8 1478 aa13.14□□□□□ -0.31
RER1-205ENST00000443438 FMN1Q68DA7 1419 aa13.13□□□□□ -0.31
RER1-205ENST00000443438 LRRC9Q6ZRR7 1453 aa13.11□□□□□ -0.31
RER1-205ENST00000443438 CFAP43Q8NDM7 1665 aa13.11□□□□□ -0.31
RER1-205ENST00000443438 NUP160Q12769 1436 aa13.1□□□□□ -0.31
RER1-205ENST00000443438 RRBP1Q9P2E9 1410 aaKnown RBP13.1□□□□□ -0.31
RER1-205ENST00000443438 CEP170Q5SW79 1584 aa13.09□□□□□ -0.31
RER1-205ENST00000443438 CHMP7Q8WUX9 453 aaPredicted RBP13.09□□□□□ -0.31
RER1-205ENST00000443438 DISP1Q96F81 1524 aa13.08□□□□□ -0.31
RER1-205ENST00000443438 KIAA0556O60303 1618 aa13.04□□□□□ -0.32
RER1-205ENST00000443438 ZEB1P37275 1124 aaPredicted RBP13.04□□□□□ -0.32
RER1-205ENST00000443438 LRRIQ1Q96JM4 1722 aa13.03□□□□□ -0.32
RER1-205ENST00000443438 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.02□□□□□ -0.33
RER1-205ENST00000443438 HNRNPUL2Q1KMD3 747 aaKnown RBP13.02□□□□□ -0.33
RER1-205ENST00000443438 ATP1B4Q9UN42 357 aaPredicted RBP13.02□□□□□ -0.33
RER1-205ENST00000443438 PHLDB1Q86UU1 1377 aa13.02□□□□□ -0.33
RER1-205ENST00000443438 FBLN2P98095 1184 aa13.01□□□□□ -0.33
RER1-205ENST00000443438 CCNB3Q8WWL7 1395 aa13.01□□□□□ -0.33
RER1-205ENST00000443438 JPH4Q96JJ6 628 aa12.99□□□□□ -0.33
RER1-205ENST00000443438 FOXD1Q16676 465 aa12.98□□□□□ -0.33
RER1-205ENST00000443438 CCDC18Q5T9S5 1454 aa12.97□□□□□ -0.33
RER1-205ENST00000443438 HECW1Q76N89 1606 aa12.97□□□□□ -0.33
RER1-205ENST00000443438 EPRSP07814 1512 aaKnown RBP12.97□□□□□ -0.33
RER1-205ENST00000443438 MAGI3Q5TCQ9 1506 aa12.97□□□□□ -0.33
RER1-205ENST00000443438 CCER1Q8TC90 406 aaPredicted RBP12.95□□□□□ -0.34
RER1-205ENST00000443438 ARHGEF11O15085 1522 aa12.94□□□□□ -0.34
RER1-205ENST00000443438 EHBP1L1Q8N3D4 1523 aa12.93□□□□□ -0.34
RER1-205ENST00000443438 NUP153P49790 1475 aaKnown RBP12.93□□□□□ -0.34
RER1-205ENST00000443438 CARMIL2Q6F5E8 1435 aa12.93□□□□□ -0.34
RER1-205ENST00000443438 CHD1O14646 1710 aa12.93□□□□□ -0.34
RER1-205ENST00000443438 MTUS2Q5JR59 1369 aa12.93□□□□□ -0.34
RER1-205ENST00000443438 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.93□□□□□ -0.346e-7■■■□□ 19.2
RER1-205ENST00000443438 CDK13Q14004 1512 aaKnown RBP12.92□□□□□ -0.34
RER1-205ENST00000443438 RAPGEF6Q8TEU7 1601 aa12.91□□□□□ -0.34
RER1-205ENST00000443438 NCOA2Q15596 1464 aa12.91□□□□□ -0.34
RER1-205ENST00000443438 SHROOM2Q13796 1616 aa12.89□□□□□ -0.35
RER1-205ENST00000443438 ILDR1Q86SU0 546 aaPredicted RBP12.89□□□□□ -0.35
RER1-205ENST00000443438 FGD6Q6ZV73 1430 aa12.88□□□□□ -0.35
RER1-205ENST00000443438 PRG4Q92954 1404 aaPredicted RBP12.88□□□□□ -0.35
RER1-205ENST00000443438 PLB1Q6P1J6 1458 aa12.88□□□□□ -0.35
RER1-205ENST00000443438 ABCA8O94911 1581 aa12.88□□□□□ -0.35
RER1-205ENST00000443438 SUPT6HQ7KZ85 1726 aaKnown RBP12.88□□□□□ -0.35
RER1-205ENST00000443438 MYOM3Q5VTT5 1437 aa12.87□□□□□ -0.35
RER1-205ENST00000443438 CLASP1Q7Z460 1538 aa12.85□□□□□ -0.35
RER1-205ENST00000443438 ARID3CA6NKF2 412 aa12.84□□□□□ -0.35
RER1-205ENST00000443438 FAM50AQ14320 339 aaKnown RBP12.84□□□□□ -0.35
RER1-205ENST00000443438 DHX57Q6P158 1386 aaKnown RBP12.83□□□□□ -0.36
RER1-205ENST00000443438 TCOF1Q13428 1488 aaKnown RBP12.83□□□□□ -0.36
RER1-205ENST00000443438 ITGAEP38570 1179 aa12.82□□□□□ -0.36
RER1-205ENST00000443438 PTPRGP23470 1445 aa12.81□□□□□ -0.36
RER1-205ENST00000443438 PTPRKQ15262 1439 aa12.81□□□□□ -0.36
RER1-205ENST00000443438 TROQ12816 1431 aaPredicted RBP12.8□□□□□ -0.36
RER1-205ENST00000443438 SETD5Q9C0A6 1442 aa12.8□□□□□ -0.36
RER1-205ENST00000443438 ATP10BO94823 1461 aa12.8□□□□□ -0.36
RER1-205ENST00000443438 ERCC6L2Q5T890 1561 aa12.8□□□□□ -0.36
RER1-205ENST00000443438 RAB3GAP2Q9H2M9 1393 aa12.8□□□□□ -0.36
RER1-205ENST00000443438 MIA2Q96PC5 1412 aa12.79□□□□□ -0.36
RER1-205ENST00000443438 PTPN23Q9H3S7 1636 aa12.79□□□□□ -0.36
RER1-205ENST00000443438 OSCARQ8IYS5 282 aa12.78□□□□□ -0.36
RER1-205ENST00000443438 CDK11AQ9UQ88 783 aaPredicted RBP12.78□□□□□ -0.36
RER1-205ENST00000443438 CLSPNQ9HAW4 1339 aa12.76□□□□□ -0.37
RER1-205ENST00000443438 UACAQ9BZF9 1416 aa12.76□□□□□ -0.37
RER1-205ENST00000443438 ADCY10Q96PN6 1610 aa12.76□□□□□ -0.37
RER1-205ENST00000443438 KIF14Q15058 1648 aa12.73□□□□□ -0.37
RER1-205ENST00000443438 GPATCH8Q9UKJ3 1502 aaKnown RBP12.72□□□□□ -0.37
RER1-205ENST00000443438 ABCC10Q5T3U5 1492 aa12.72□□□□□ -0.37
RER1-205ENST00000443438 HFM1A2PYH4 1435 aa12.71□□□□□ -0.37
RER1-205ENST00000443438 PLEKHD1A6NEE1 506 aa12.71□□□□□ -0.37
RER1-205ENST00000443438 NAIPQ13075 1403 aa12.71□□□□□ -0.38
RER1-205ENST00000443438 ABCC2Q92887 1545 aa12.7□□□□□ -0.38
RER1-205ENST00000443438 MAPKBP1O60336 1514 aa12.69□□□□□ -0.38
RER1-205ENST00000443438 UHRF1BP1LA0JNW5 1464 aa12.69□□□□□ -0.38
RER1-205ENST00000443438 AKNAQ7Z591 1439 aa12.69□□□□□ -0.38
RER1-205ENST00000443438 RIMBP3CA6NJZ7 1639 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms