RNA–Protein interactions for RNA: ENST00000443128.6

CCDC113-202, Transcript of coiled-coil domain containing 113, humanhuman

TSL 2 BASIC

Gene CCDC113, Length 5,110 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-202ENST00000443128 KCNH8Q96L42 1107 aa12.19□□□□□ -0.46
CCDC113-202ENST00000443128 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.19□□□□□ -0.46
CCDC113-202ENST00000443128 VPS8Q8N3P4 1428 aa12.19□□□□□ -0.46
CCDC113-202ENST00000443128 CFTRP13569 1480 aa12.16□□□□□ -0.46
CCDC113-202ENST00000443128 CFDP1Q9UEE9 299 aaPredicted RBP12.15□□□□□ -0.47
CCDC113-202ENST00000443128 RAPGEF2Q9Y4G8 1499 aa12.14□□□□□ -0.47
CCDC113-202ENST00000443128 HMGXB3Q12766 1538 aa12.13□□□□□ -0.47
CCDC113-202ENST00000443128 CHGAP10645 457 aaKnown RBP12.12□□□□□ -0.47
CCDC113-202ENST00000443128 CCNB3Q8WWL7 1395 aa12.11□□□□□ -0.47
CCDC113-202ENST00000443128 KANK4Q5T7N3 995 aaPredicted RBP12.11□□□□□ -0.47
CCDC113-202ENST00000443128 RAD54L2Q9Y4B4 1467 aa12.1□□□□□ -0.47
CCDC113-202ENST00000443128 DDX10Q13206 875 aaKnown RBP12.1□□□□□ -0.47
CCDC113-202ENST00000443128 BCANQ96GW7 911 aa12.1□□□□□ -0.47
CCDC113-202ENST00000443128 ESF1Q9H501 851 aaKnown RBP12.1□□□□□ -0.47
CCDC113-202ENST00000443128 FGD5Q6ZNL6 1462 aa12.08□□□□□ -0.48
CCDC113-202ENST00000443128 PEG3Q9GZU2 1588 aa12.08□□□□□ -0.48
CCDC113-202ENST00000443128 GTF3C3Q9Y5Q9 886 aa12.08□□□□□ -0.48
CCDC113-202ENST00000443128 SYNJ1O43426 1573 aa12.07□□□□□ -0.48
CCDC113-202ENST00000443128 KDM2AQ9Y2K7 1162 aa12.07□□□□□ -0.48
CCDC113-202ENST00000443128 IGF1RP08069 1367 aa12.06□□□□□ -0.48
CCDC113-202ENST00000443128 HIRIP3Q9BW71 556 aaPredicted RBP12.05□□□□□ -0.48
CCDC113-202ENST00000443128 STAG3Q9UJ98 1225 aa12.05□□□□□ -0.48
CCDC113-202ENST00000443128 FMN1Q68DA7 1419 aa12.04□□□□□ -0.48
CCDC113-202ENST00000443128 FHOD3Q2V2M9 1422 aa12.03□□□□□ -0.48
CCDC113-202ENST00000443128 ARHGAP35Q9NRY4 1499 aa12.02□□□□□ -0.48
CCDC113-202ENST00000443128 CARMIL2Q6F5E8 1435 aa12.02□□□□□ -0.48
CCDC113-202ENST00000443128 ACIN1Q9UKV3 1341 aaKnown RBP12.01□□□□□ -0.49
CCDC113-202ENST00000443128 PLPPR3Q6T4P5 718 aa12□□□□□ -0.49
CCDC113-202ENST00000443128 CUX1P39880 1505 aa12□□□□□ -0.49
CCDC113-202ENST00000443128 SIN3AQ96ST3 1273 aa11.99□□□□□ -0.49
CCDC113-202ENST00000443128 AQRO60306 1485 aaKnown RBP eCLIP11.98□□□□□ -0.49
CCDC113-202ENST00000443128 EIF4G2P78344 907 aaKnown RBP eCLIP11.97□□□□□ -0.49
CCDC113-202ENST00000443128 CLSPNQ9HAW4 1339 aa11.96□□□□□ -0.49
CCDC113-202ENST00000443128 MIER1Q8N108 512 aa11.96□□□□□ -0.49
CCDC113-202ENST00000443128 RGL3Q3MIN7 710 aa11.96□□□□□ -0.5
CCDC113-202ENST00000443128 GAPVD1Q14C86 1478 aa11.95□□□□□ -0.5
CCDC113-202ENST00000443128 SETD5Q9C0A6 1442 aa11.94□□□□□ -0.5
CCDC113-202ENST00000443128 TOPBP1Q92547 1522 aa11.94□□□□□ -0.5
CCDC113-202ENST00000443128 JPH4Q96JJ6 628 aa11.93□□□□□ -0.5
CCDC113-202ENST00000443128 FAM9BQ8IZU0 186 aa11.93□□□□□ -0.5
CCDC113-202ENST00000443128 POLA1P09884 1462 aaPredicted RBP11.93□□□□□ -0.5
CCDC113-202ENST00000443128 HNRNPUQ00839 825 aaKnown RBP eCLIP11.92□□□□□ -0.5
CCDC113-202ENST00000443128 DAXXQ9UER7 740 aaPredicted RBP11.92□□□□□ -0.5
CCDC113-202ENST00000443128 TOP2BQ02880 1626 aa11.91□□□□□ -0.5
CCDC113-202ENST00000443128 RAB3GAP2Q9H2M9 1393 aa11.89□□□□□ -0.51
CCDC113-202ENST00000443128 SENP3Q9H4L4 574 aaPredicted RBP11.88□□□□□ -0.51
CCDC113-202ENST00000443128 NEFMP07197 916 aa11.88□□□□□ -0.51
CCDC113-202ENST00000443128 TMC1Q8TDI8 760 aa11.87□□□□□ -0.51
CCDC113-202ENST00000443128 MRS2Q9HD23 443 aa11.87□□□□□ -0.51
CCDC113-202ENST00000443128 PRXQ9BXM0 1461 aa11.86□□□□□ -0.51
CCDC113-202ENST00000443128 CARD11Q9BXL7 1154 aa11.85□□□□□ -0.51
CCDC113-202ENST00000443128 CCDC18Q5T9S5 1454 aa11.84□□□□□ -0.51
CCDC113-202ENST00000443128 CANXP27824 592 aaKnown RBP11.84□□□□□ -0.51
CCDC113-202ENST00000443128 KIF21BO75037 1637 aa11.84□□□□□ -0.51
CCDC113-202ENST00000443128 SALL2Q9Y467 1007 aaPredicted RBP11.83□□□□□ -0.51
CCDC113-202ENST00000443128 MRC2Q9UBG0 1479 aa11.83□□□□□ -0.52
CCDC113-202ENST00000443128 FOXD1Q16676 465 aa11.83□□□□□ -0.52
CCDC113-202ENST00000443128 LAMC3Q9Y6N6 1575 aa11.83□□□□□ -0.52
CCDC113-202ENST00000443128 URB2Q14146 1524 aaKnown RBP11.82□□□□□ -0.52
CCDC113-202ENST00000443128 TIMELESSQ9UNS1 1208 aa11.82□□□□□ -0.52
CCDC113-202ENST00000443128 ARID4BQ4LE39 1312 aaPredicted RBP11.82□□□□□ -0.52
CCDC113-202ENST00000443128 ERICH3Q5RHP9 1530 aa11.81□□□□□ -0.52
CCDC113-202ENST00000443128 SLC24A1O60721 1099 aa11.81□□□□□ -0.52
CCDC113-202ENST00000443128 PPP1R15AO75807 674 aaPredicted RBP11.81□□□□□ -0.52
CCDC113-202ENST00000443128 EFCAB2Q5VUJ9 269 aa11.81□□□□□ -0.52
CCDC113-202ENST00000443128 PKD2Q13563 968 aa11.8□□□□□ -0.52
CCDC113-202ENST00000443128 FKBP8Q14318 412 aa11.8□□□□□ -0.52
CCDC113-202ENST00000443128 DNMBPQ6XZF7 1577 aa11.8□□□□□ -0.52
CCDC113-202ENST00000443128 MPHOSPH9Q99550 1183 aa11.79□□□□□ -0.52
CCDC113-202ENST00000443128 ANKRD30AQ9BXX3 1397 aa11.79□□□□□ -0.52
CCDC113-202ENST00000443128 HNRNPMP52272 730 aaKnown RBP eCLIP11.79□□□□□ -0.52
CCDC113-202ENST00000443128 DCAF11Q8TEB1 546 aa11.79□□□□□ -0.52
CCDC113-202ENST00000443128 PTPRGP23470 1445 aa11.79□□□□□ -0.52
CCDC113-202ENST00000443128 GRIN2BQ13224 1484 aa11.78□□□□□ -0.52
CCDC113-202ENST00000443128 KANK1Q14678 1352 aa11.77□□□□□ -0.52
CCDC113-202ENST00000443128 ARAP1Q96P48 1450 aa11.77□□□□□ -0.52
CCDC113-202ENST00000443128 WDR43Q15061 677 aaKnown RBP eCLIP11.77□□□□□ -0.52
CCDC113-202ENST00000443128 NUP155O75694 1391 aa11.77□□□□□ -0.53
CCDC113-202ENST00000443128 ABCA10Q8WWZ4 1543 aa11.75□□□□□ -0.53
CCDC113-202ENST00000443128 GGT6Q6P531 493 aa11.74□□□□□ -0.53
CCDC113-202ENST00000443128 ZNF608Q9ULD9 1512 aaPredicted RBP11.74□□□□□ -0.53
CCDC113-202ENST00000443128 CDCA8Q53HL2 280 aa11.73□□□□□ -0.53
CCDC113-202ENST00000443128 IFT140Q96RY7 1462 aa11.73□□□□□ -0.53
CCDC113-202ENST00000443128 DHX57Q6P158 1386 aaKnown RBP11.72□□□□□ -0.53
CCDC113-202ENST00000443128 RSPH4AQ5TD94 716 aa11.72□□□□□ -0.53
CCDC113-202ENST00000443128 ZBTB47Q9UFB7 747 aaPredicted RBP11.71□□□□□ -0.53
CCDC113-202ENST00000443128 MLECQ14165 292 aa11.71□□□□□ -0.53
CCDC113-202ENST00000443128 LRRC9Q6ZRR7 1453 aa11.71□□□□□ -0.53
CCDC113-202ENST00000443128 CASKIN1Q8WXD9 1431 aa11.71□□□□□ -0.54
CCDC113-202ENST00000443128 HSPA5P11021 654 aaKnown RBP11.71□□□□□ -0.54
CCDC113-202ENST00000443128 KNSTRNQ9Y448 316 aa11.71□□□□□ -0.54
CCDC113-202ENST00000443128 BCL11AQ9H165 835 aa11.7□□□□□ -0.54
CCDC113-202ENST00000443128 PHLDB1Q86UU1 1377 aa11.7□□□□□ -0.54
CCDC113-202ENST00000443128 SPAG9O60271 1321 aaKnown RBP11.69□□□□□ -0.54
CCDC113-202ENST00000443128 TRHP20396 242 aaPredicted RBP11.69□□□□□ -0.54
CCDC113-202ENST00000443128 OSCARQ8IYS5 282 aa11.69□□□□□ -0.54
CCDC113-202ENST00000443128 SNAPC4Q5SXM2 1469 aa11.68□□□□□ -0.54
CCDC113-202ENST00000443128 MYT1Q01538 1121 aa11.68□□□□□ -0.54
CCDC113-202ENST00000443128 KIF3BO15066 747 aa11.68□□□□□ -0.54
CCDC113-202ENST00000443128 FGD6Q6ZV73 1430 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms