RNA–Protein interactions for RNA: ENST00000442742.6

CASK-208, Transcript of calcium/calmodulin dependent serine protein kinase, humanhuman

TSL 1 (best) BASIC

Gene CASK, Length 2,800 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASK-208ENST00000442742 WDR97A6NE52 1622 aa14.3□□□□□ -0.12
CASK-208ENST00000442742 FBLN2P98095 1184 aa14.29□□□□□ -0.12
CASK-208ENST00000442742 TARBP1Q13395 1621 aaKnown RBP14.29□□□□□ -0.12
CASK-208ENST00000442742 ABCA5Q8WWZ7 1642 aa14.28□□□□□ -0.12
CASK-208ENST00000442742 ZEB1P37275 1124 aaPredicted RBP14.27□□□□□ -0.12
CASK-208ENST00000442742 CUL7Q14999 1698 aa14.26□□□□□ -0.13
CASK-208ENST00000442742 ARID3CA6NKF2 412 aa14.25□□□□□ -0.13
CASK-208ENST00000442742 CTTNBP2Q8WZ74 1663 aa14.19□□□□□ -0.14
CASK-208ENST00000442742 WDR62O43379 1518 aa14.19□□□□□ -0.14
CASK-208ENST00000442742 PBRM1Q86U86 1689 aa14.18□□□□□ -0.14
CASK-208ENST00000442742 IFT140Q96RY7 1462 aa14.18□□□□□ -0.14
CASK-208ENST00000442742 GRIN2BQ13224 1484 aa14.17□□□□□ -0.14
CASK-208ENST00000442742 CHMP7Q8WUX9 453 aaPredicted RBP14.17□□□□□ -0.14
CASK-208ENST00000442742 FAM50AQ14320 339 aaKnown RBP14.16□□□□□ -0.14
CASK-208ENST00000442742 FHAD1B1AJZ9 1412 aa14.16□□□□□ -0.14
CASK-208ENST00000442742 PCF11O94913 1555 aaKnown RBP14.15□□□□□ -0.14
CASK-208ENST00000442742 SNAPC4Q5SXM2 1469 aa14.14□□□□□ -0.15
CASK-208ENST00000442742 THOC2Q8NI27 1593 aaKnown RBP14.12□□□□□ -0.15
CASK-208ENST00000442742 TIAM1Q13009 1591 aa14.12□□□□□ -0.15
CASK-208ENST00000442742 EIF4G3O43432 1585 aaKnown RBP14.11□□□□□ -0.15
CASK-208ENST00000442742 LRRC9Q6ZRR7 1453 aa14.1□□□□□ -0.15
CASK-208ENST00000442742 ADAMTS12P58397 1594 aa14.1□□□□□ -0.15
CASK-208ENST00000442742 PHLDB1Q86UU1 1377 aa14.09□□□□□ -0.15
CASK-208ENST00000442742 CCNB3Q8WWL7 1395 aa14.09□□□□□ -0.15
CASK-208ENST00000442742 EFCAB5A4FU69 1503 aa14.09□□□□□ -0.15
CASK-208ENST00000442742 FMN1Q68DA7 1419 aa14.09□□□□□ -0.15
CASK-208ENST00000442742 CASKIN1Q8WXD9 1431 aa14.07□□□□□ -0.16
CASK-208ENST00000442742 MTUS2Q5JR59 1369 aa14.06□□□□□ -0.16
CASK-208ENST00000442742 IQGAP2Q13576 1575 aa14.05□□□□□ -0.16
CASK-208ENST00000442742 FYCO1Q9BQS8 1478 aa14.04□□□□□ -0.16
CASK-208ENST00000442742 RRBP1Q9P2E9 1410 aaKnown RBP14.04□□□□□ -0.16
CASK-208ENST00000442742 GRIN2AQ12879 1464 aa14.03□□□□□ -0.16
CASK-208ENST00000442742 SAMD9Q5K651 1589 aa14.02□□□□□ -0.16
CASK-208ENST00000442742 JPH4Q96JJ6 628 aa13.98□□□□□ -0.17
CASK-208ENST00000442742 LRRIQ1Q96JM4 1722 aa13.98□□□□□ -0.17
CASK-208ENST00000442742 MAP3K1Q13233 1512 aa13.98□□□□□ -0.17
CASK-208ENST00000442742 CFAP43Q8NDM7 1665 aa13.98□□□□□ -0.17
CASK-208ENST00000442742 KIAA0586Q9BVV6 1533 aa13.97□□□□□ -0.17
CASK-208ENST00000442742 SYNJ2O15056 1496 aa13.97□□□□□ -0.17
CASK-208ENST00000442742 MAGI1Q96QZ7 1491 aaPredicted RBP13.96□□□□□ -0.17
CASK-208ENST00000442742 CDK13Q14004 1512 aaKnown RBP13.95□□□□□ -0.18
CASK-208ENST00000442742 CEP170Q5SW79 1584 aa13.94□□□□□ -0.18
CASK-208ENST00000442742 DISP1Q96F81 1524 aa13.93□□□□□ -0.18
CASK-208ENST00000442742 CHIC2Q9UKJ5 165 aa13.93□□□□□ -0.18
CASK-208ENST00000442742 DHX57Q6P158 1386 aaKnown RBP13.92□□□□□ -0.18
CASK-208ENST00000442742 RAB3GAP2Q9H2M9 1393 aa13.92□□□□□ -0.18
CASK-208ENST00000442742 NCOA2Q15596 1464 aa13.91□□□□□ -0.18
CASK-208ENST00000442742 MAGI3Q5TCQ9 1506 aa13.91□□□□□ -0.18
CASK-208ENST00000442742 UGGT2Q9NYU1 1516 aa13.91□□□□□ -0.18
CASK-208ENST00000442742 EPRSP07814 1512 aaKnown RBP13.9□□□□□ -0.18
CASK-208ENST00000442742 FGD6Q6ZV73 1430 aa13.89□□□□□ -0.19
CASK-208ENST00000442742 KIAA0556O60303 1618 aa13.89□□□□□ -0.19
CASK-208ENST00000442742 PLB1Q6P1J6 1458 aa13.88□□□□□ -0.19
CASK-208ENST00000442742 NEUROD1Q13562 356 aa13.86□□□□□ -0.19
CASK-208ENST00000442742 RRP7BPQ9NSQ0 103 aa13.86□□□□□ -0.19
CASK-208ENST00000442742 HECW1Q76N89 1606 aa13.86□□□□□ -0.19
CASK-208ENST00000442742 SETD5Q9C0A6 1442 aa13.86□□□□□ -0.19
CASK-208ENST00000442742 ZNF777Q9ULD5 760 aaPredicted RBP13.84□□□□□ -0.19
CASK-208ENST00000442742 MYOM3Q5VTT5 1437 aa13.84□□□□□ -0.19
CASK-208ENST00000442742 CARMIL2Q6F5E8 1435 aa13.84□□□□□ -0.19
CASK-208ENST00000442742 CCDC18Q5T9S5 1454 aa13.84□□□□□ -0.19
CASK-208ENST00000442742 NUP160Q12769 1436 aa13.83□□□□□ -0.19
CASK-208ENST00000442742 ZNF644Q9H582 1327 aaPredicted RBP13.83□□□□□ -0.2
CASK-208ENST00000442742 SUPT6HQ7KZ85 1726 aaKnown RBP13.83□□□□□ -0.2
CASK-208ENST00000442742 NUP153P49790 1475 aaKnown RBP13.83□□□□□ -0.2
CASK-208ENST00000442742 SIN3AQ96ST3 1273 aa13.83□□□□□ -0.2
CASK-208ENST00000442742 PTPRKQ15262 1439 aa13.83□□□□□ -0.2
CASK-208ENST00000442742 DIEXFQ68CQ4 756 aaKnown RBP13.82□□□□□ -0.2
CASK-208ENST00000442742 CDK11AQ9UQ88 783 aaPredicted RBP13.82□□□□□ -0.2
CASK-208ENST00000442742 EHBP1L1Q8N3D4 1523 aa13.82□□□□□ -0.2
CASK-208ENST00000442742 PRG4Q92954 1404 aaPredicted RBP13.81□□□□□ -0.2
CASK-208ENST00000442742 ZNF316A6NFI3 1004 aaPredicted RBP13.8□□□□□ -0.2
CASK-208ENST00000442742 RAPGEF6Q8TEU7 1601 aa13.79□□□□□ -0.2
CASK-208ENST00000442742 CHD1O14646 1710 aa13.79□□□□□ -0.2
CASK-208ENST00000442742 PTPN23Q9H3S7 1636 aa13.76□□□□□ -0.21
CASK-208ENST00000442742 PLEKHD1A6NEE1 506 aa13.76□□□□□ -0.21
CASK-208ENST00000442742 TRIM52Q96A61 297 aa13.76□□□□□ -0.21
CASK-208ENST00000442742 PTPRGP23470 1445 aa13.75□□□□□ -0.21
CASK-208ENST00000442742 CFDP1Q9UEE9 299 aaPredicted RBP13.75□□□□□ -0.21
CASK-208ENST00000442742 CLSPNQ9HAW4 1339 aa13.73□□□□□ -0.21
CASK-208ENST00000442742 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.72□□□□□ -0.21
CASK-208ENST00000442742 KCNH8Q96L42 1107 aa13.71□□□□□ -0.21
CASK-208ENST00000442742 ARHGEF11O15085 1522 aa13.71□□□□□ -0.21
CASK-208ENST00000442742 MAPKBP1O60336 1514 aa13.71□□□□□ -0.22
CASK-208ENST00000442742 ERCC6L2Q5T890 1561 aa13.7□□□□□ -0.22
CASK-208ENST00000442742 NAIPQ13075 1403 aa13.69□□□□□ -0.22
CASK-208ENST00000442742 FOXD1Q16676 465 aa13.69□□□□□ -0.22
CASK-208ENST00000442742 ATP10BO94823 1461 aa13.69□□□□□ -0.22
CASK-208ENST00000442742 TROQ12816 1431 aaPredicted RBP13.69□□□□□ -0.22
CASK-208ENST00000442742 KIF14Q15058 1648 aa13.68□□□□□ -0.22
CASK-208ENST00000442742 HFM1A2PYH4 1435 aa13.67□□□□□ -0.22
CASK-208ENST00000442742 HIRIP3Q9BW71 556 aaPredicted RBP13.66□□□□□ -0.22
CASK-208ENST00000442742 MIA2Q96PC5 1412 aa13.65□□□□□ -0.22
CASK-208ENST00000442742 HNRNPMP52272 730 aaKnown RBP eCLIP13.63□□□□□ -0.23
CASK-208ENST00000442742 ABCA8O94911 1581 aa13.63□□□□□ -0.23
CASK-208ENST00000442742 TCOF1Q13428 1488 aaKnown RBP13.62□□□□□ -0.23
CASK-208ENST00000442742 GPATCH8Q9UKJ3 1502 aaKnown RBP13.62□□□□□ -0.23
CASK-208ENST00000442742 KDM6BO15054 1643 aa13.62□□□□□ -0.23
CASK-208ENST00000442742 DAPK1P53355 1430 aa13.62□□□□□ -0.23
CASK-208ENST00000442742 ABCC5O15440 1437 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms