RNA–Protein interactions for RNA: ENST00000441460.5

RFTN1-204, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS ALT2 TSL 5

Gene RFTN1, Length 599 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-204ENST00000441460 JPH4Q96JJ6 628 aa23.18■■□□□ 1.3
RFTN1-204ENST00000441460 PRG4Q92954 1404 aaPredicted RBP23.16■■□□□ 1.3
RFTN1-204ENST00000441460 KIAA0586Q9BVV6 1533 aa23.13■■□□□ 1.29
RFTN1-204ENST00000441460 TRHP20396 242 aaPredicted RBP23.06■■□□□ 1.28
RFTN1-204ENST00000441460 RAPGEF2Q9Y4G8 1499 aa23.02■■□□□ 1.28
RFTN1-204ENST00000441460 IQGAP2Q13576 1575 aa22.95■■□□□ 1.26
RFTN1-204ENST00000441460 PRXQ9BXM0 1461 aa22.92■■□□□ 1.26
RFTN1-204ENST00000441460 DISP1Q96F81 1524 aa22.87■■□□□ 1.25
RFTN1-204ENST00000441460 ADCY10Q96PN6 1610 aa22.86■■□□□ 1.25
RFTN1-204ENST00000441460 CARMIL2Q6F5E8 1435 aa22.85■■□□□ 1.25
RFTN1-204ENST00000441460 UGGT2Q9NYU1 1516 aa22.84■■□□□ 1.25
RFTN1-204ENST00000441460 PTPRGP23470 1445 aa22.83■■□□□ 1.25
RFTN1-204ENST00000441460 TNIKQ9UKE5 1360 aa22.83■■□□□ 1.25
RFTN1-204ENST00000441460 TTBK1Q5TCY1 1321 aaPredicted RBP22.8■■□□□ 1.24
RFTN1-204ENST00000441460 CSRNP3Q8WYN3 585 aa22.79■■□□□ 1.24
RFTN1-204ENST00000441460 CTTNBP2Q8WZ74 1663 aa22.77■■□□□ 1.24
RFTN1-204ENST00000441460 KIAA0556O60303 1618 aa22.76■■□□□ 1.23
RFTN1-204ENST00000441460 MAPKBP1O60336 1514 aa22.75■■□□□ 1.23
RFTN1-204ENST00000441460 NPM1P06748 294 aaKnown RBP eCLIP22.74■■□□□ 1.23
RFTN1-204ENST00000441460 CHIC1Q5VXU3 224 aa22.74■■□□□ 1.23
RFTN1-204ENST00000441460 EEA1Q15075 1411 aa22.73■■□□□ 1.23
RFTN1-204ENST00000441460 KIF13AQ9H1H9 1805 aa22.71■■□□□ 1.23
RFTN1-204ENST00000441460 ABCC10Q5T3U5 1492 aa22.69■■□□□ 1.22
RFTN1-204ENST00000441460 UACAQ9BZF9 1416 aa22.69■■□□□ 1.22
RFTN1-204ENST00000441460 ABCC2Q92887 1545 aa22.68■■□□□ 1.22
RFTN1-204ENST00000441460 UHRF1BP1LA0JNW5 1464 aa22.68■■□□□ 1.22
RFTN1-204ENST00000441460 FAM9AQ8IZU1 332 aaPredicted RBP22.68■■□□□ 1.22
RFTN1-204ENST00000441460 DIP2BQ9P265 1576 aa22.65■■□□□ 1.22
RFTN1-204ENST00000441460 FAM69CQ0P6D2 419 aa22.64■■□□□ 1.21
RFTN1-204ENST00000441460 GOLGA3Q08378 1498 aa22.64■■□□□ 1.21
RFTN1-204ENST00000441460 KDM5BQ9UGL1 1544 aa22.59■■□□□ 1.21
RFTN1-204ENST00000441460 PLB1Q6P1J6 1458 aa22.59■■□□□ 1.21
RFTN1-204ENST00000441460 ASXL2Q76L83 1435 aa22.57■■□□□ 1.2
RFTN1-204ENST00000441460 KIF21BO75037 1637 aa22.55■■□□□ 1.2
RFTN1-204ENST00000441460 ABCA8O94911 1581 aa22.54■■□□□ 1.2
RFTN1-204ENST00000441460 P3H3Q8IVL6 736 aa22.53■■□□□ 1.2
RFTN1-204ENST00000441460 SAMD9Q5K651 1589 aa22.53■■□□□ 1.2
RFTN1-204ENST00000441460 ZCCHC11Q5TAX3 1644 aaKnown RBP22.53■■□□□ 1.2
RFTN1-204ENST00000441460 GLI2P10070 1586 aa22.46■■□□□ 1.19
RFTN1-204ENST00000441460 EPRSP07814 1512 aaKnown RBP22.45■■□□□ 1.18
RFTN1-204ENST00000441460 RANGAP1P46060 587 aaPredicted RBP22.44■■□□□ 1.18
RFTN1-204ENST00000441460 TSPOAP1O95153 1857 aa22.43■■□□□ 1.18
RFTN1-204ENST00000441460 EHMT2Q96KQ7 1210 aa22.42■■□□□ 1.18
RFTN1-204ENST00000441460 WDR7Q9Y4E6 1490 aa22.41■■□□□ 1.18
RFTN1-204ENST00000441460 FHOD3Q2V2M9 1422 aa22.4■■□□□ 1.18
RFTN1-204ENST00000441460 PPRC1Q5VV67 1664 aaKnown RBP22.39■■□□□ 1.17
RFTN1-204ENST00000441460 ATP10BO94823 1461 aa22.36■■□□□ 1.17
RFTN1-204ENST00000441460 ARID3CA6NKF2 412 aa22.36■■□□□ 1.17
RFTN1-204ENST00000441460 UBTFP17480 764 aaKnown RBP22.35■■□□□ 1.17
RFTN1-204ENST00000441460 MAP3K4Q9Y6R4 1608 aa22.35■■□□□ 1.17
RFTN1-204ENST00000441460 RAPGEF6Q8TEU7 1601 aa22.34■■□□□ 1.17
RFTN1-204ENST00000441460 EFCAB5A4FU69 1503 aa22.33■■□□□ 1.17
RFTN1-204ENST00000441460 KDM6BO15054 1643 aa22.32■■□□□ 1.16
RFTN1-204ENST00000441460 NUP153P49790 1475 aaKnown RBP22.3■■□□□ 1.16
RFTN1-204ENST00000441460 KCNH8Q96L42 1107 aa22.29■■□□□ 1.16
RFTN1-204ENST00000441460 ARHGAP35Q9NRY4 1499 aa22.25■■□□□ 1.15
RFTN1-204ENST00000441460 COL17A1Q9UMD9 1497 aaPredicted RBP22.24■■□□□ 1.15
RFTN1-204ENST00000441460 CD109Q6YHK3 1445 aa22.23■■□□□ 1.15
RFTN1-204ENST00000441460 TEX14Q8IWB6 1497 aa22.22■■□□□ 1.15
RFTN1-204ENST00000441460 CFAP43Q8NDM7 1665 aa22.21■■□□□ 1.15
RFTN1-204ENST00000441460 MAGI3Q5TCQ9 1506 aa22.2■■□□□ 1.14
RFTN1-204ENST00000441460 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.18■■□□□ 1.14
RFTN1-204ENST00000441460 HNRNPUL2Q1KMD3 747 aaKnown RBP22.18■■□□□ 1.14
RFTN1-204ENST00000441460 ABCA9Q8IUA7 1624 aa22.14■■□□□ 1.14
RFTN1-204ENST00000441460 FMN1Q68DA7 1419 aa22.13■■□□□ 1.13
RFTN1-204ENST00000441460 CDK13Q14004 1512 aaKnown RBP22.11■■□□□ 1.13
RFTN1-204ENST00000441460 PLEKHD1A6NEE1 506 aa22.08■■□□□ 1.13
RFTN1-204ENST00000441460 HECW1Q76N89 1606 aa22.06■■□□□ 1.12
RFTN1-204ENST00000441460 AEBP2Q6ZN18 517 aaPredicted RBP22.04■■□□□ 1.12
RFTN1-204ENST00000441460 ATP1B4Q9UN42 357 aaPredicted RBP22.03■■□□□ 1.12
RFTN1-204ENST00000441460 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.01■■□□□ 1.11
RFTN1-204ENST00000441460 ARAP3Q8WWN8 1544 aa22.01■■□□□ 1.11
RFTN1-204ENST00000441460 KDM4FA0A1W2PPD8 638 aa22■■□□□ 1.11
RFTN1-204ENST00000441460 CLIP1P30622 1438 aa21.99■■□□□ 1.11
RFTN1-204ENST00000441460 TTC37Q6PGP7 1564 aa21.99■■□□□ 1.11
RFTN1-204ENST00000441460 LRRIQ1Q96JM4 1722 aa21.98■■□□□ 1.11
RFTN1-204ENST00000441460 NEO1Q92859 1461 aa21.97■■□□□ 1.11
RFTN1-204ENST00000441460 PCF11O94913 1555 aaKnown RBP21.97■■□□□ 1.11
RFTN1-204ENST00000441460 PHLDB1Q86UU1 1377 aa21.97■■□□□ 1.11
RFTN1-204ENST00000441460 CASKIN1Q8WXD9 1431 aa21.96■■□□□ 1.11
RFTN1-204ENST00000441460 RAPGEF3O95398 923 aa21.92■■□□□ 1.1
RFTN1-204ENST00000441460 TROQ12816 1431 aaPredicted RBP21.9■■□□□ 1.1
RFTN1-204ENST00000441460 CDK11AQ9UQ88 783 aaPredicted RBP21.9■■□□□ 1.1
RFTN1-204ENST00000441460 KIF14Q15058 1648 aa21.9■■□□□ 1.1
RFTN1-204ENST00000441460 FANCAO15360 1455 aa21.9■■□□□ 1.1
RFTN1-204ENST00000441460 FRMPD1Q5SYB0 1578 aa21.89■■□□□ 1.09
RFTN1-204ENST00000441460 ADGRL1O94910 1474 aa21.88■■□□□ 1.09
RFTN1-204ENST00000441460 FYCO1Q9BQS8 1478 aa21.88■■□□□ 1.09
RFTN1-204ENST00000441460 AKNAQ7Z591 1439 aa21.88■■□□□ 1.09
RFTN1-204ENST00000441460 CCDC18Q5T9S5 1454 aa21.87■■□□□ 1.09
RFTN1-204ENST00000441460 PLCH2O75038 1416 aa21.87■■□□□ 1.09
RFTN1-204ENST00000441460 CEP162Q5TB80 1403 aa21.84■■□□□ 1.09
RFTN1-204ENST00000441460 CFAP74Q9C0B2 1584 aa21.83■■□□□ 1.09
RFTN1-204ENST00000441460 LOC105371045A0A1W2PR82 267 aa21.82■■□□□ 1.08
RFTN1-204ENST00000441460 DENND4BO75064 1496 aaPredicted RBP21.82■■□□□ 1.08
RFTN1-204ENST00000441460 RICTORQ6R327 1708 aa21.8■■□□□ 1.08
RFTN1-204ENST00000441460 MYO5CQ9NQX4 1742 aa21.79■■□□□ 1.08
RFTN1-204ENST00000441460 SCAPERQ9BY12 1400 aa21.76■■□□□ 1.07
RFTN1-204ENST00000441460 EFCAB2Q5VUJ9 269 aa21.75■■□□□ 1.07
RFTN1-204ENST00000441460 POGZQ7Z3K3 1410 aa21.73■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms