RNA–Protein interactions for RNA: ENST00000441135.1

SMPD4-210, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 4

Gene SMPD4, Length 699 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-210ENST00000441135 PRG4Q92954 1404 aaPredicted RBP31.16■■■□□ 2.58
SMPD4-210ENST00000441135 JPH4Q96JJ6 628 aa31.16■■■□□ 2.58
SMPD4-210ENST00000441135 CARMIL1Q5VZK9 1371 aa31.12■■■□□ 2.57
SMPD4-210ENST00000441135 KIAA0586Q9BVV6 1533 aa31.12■■■□□ 2.57
SMPD4-210ENST00000441135 RAPGEF2Q9Y4G8 1499 aa30.9■■■□□ 2.54
SMPD4-210ENST00000441135 IQGAP2Q13576 1575 aa30.87■■■□□ 2.53
SMPD4-210ENST00000441135 CARMIL2Q6F5E8 1435 aa30.81■■■□□ 2.52
SMPD4-210ENST00000441135 PTPRGP23470 1445 aa30.74■■■□□ 2.51
SMPD4-210ENST00000441135 ADCY10Q96PN6 1610 aa30.74■■■□□ 2.51
SMPD4-210ENST00000441135 NPM1P06748 294 aaKnown RBP eCLIP30.73■■■□□ 2.51
SMPD4-210ENST00000441135 TNIKQ9UKE5 1360 aa30.73■■■□□ 2.51
SMPD4-210ENST00000441135 MAPKBP1O60336 1514 aa30.69■■■□□ 2.5
SMPD4-210ENST00000441135 UGGT2Q9NYU1 1516 aa30.69■■■□□ 2.5
SMPD4-210ENST00000441135 PRXQ9BXM0 1461 aa30.68■■■□□ 2.5
SMPD4-210ENST00000441135 DISP1Q96F81 1524 aa30.67■■■□□ 2.5
SMPD4-210ENST00000441135 EEA1Q15075 1411 aa30.6■■■□□ 2.49
SMPD4-210ENST00000441135 CTTNBP2Q8WZ74 1663 aa30.59■■■□□ 2.49
SMPD4-210ENST00000441135 ABCC10Q5T3U5 1492 aa30.59■■■□□ 2.49
SMPD4-210ENST00000441135 CHIC1Q5VXU3 224 aa30.59■■■□□ 2.49
SMPD4-210ENST00000441135 TTBK1Q5TCY1 1321 aaPredicted RBP30.58■■■□□ 2.49
SMPD4-210ENST00000441135 KIF13AQ9H1H9 1805 aa30.58■■■□□ 2.49
SMPD4-210ENST00000441135 KIAA0556O60303 1618 aa30.57■■■□□ 2.48
SMPD4-210ENST00000441135 ABCC2Q92887 1545 aa30.55■■■□□ 2.48
SMPD4-210ENST00000441135 UHRF1BP1LA0JNW5 1464 aa30.55■■■□□ 2.48
SMPD4-210ENST00000441135 UACAQ9BZF9 1416 aa30.53■■■□□ 2.48
SMPD4-210ENST00000441135 DIP2BQ9P265 1576 aa30.51■■■□□ 2.47
SMPD4-210ENST00000441135 FAM69CQ0P6D2 419 aa30.51■■■□□ 2.47
SMPD4-210ENST00000441135 GOLGA3Q08378 1498 aa30.5■■■□□ 2.47
SMPD4-210ENST00000441135 CSRNP3Q8WYN3 585 aa30.5■■■□□ 2.47
SMPD4-210ENST00000441135 PLB1Q6P1J6 1458 aa30.39■■■□□ 2.46
SMPD4-210ENST00000441135 KDM5BQ9UGL1 1544 aa30.39■■■□□ 2.46
SMPD4-210ENST00000441135 ASXL2Q76L83 1435 aa30.39■■■□□ 2.45
SMPD4-210ENST00000441135 ZCCHC11Q5TAX3 1644 aaKnown RBP30.29■■■□□ 2.44
SMPD4-210ENST00000441135 GLI2P10070 1586 aa30.28■■■□□ 2.44
SMPD4-210ENST00000441135 ABCA8O94911 1581 aa30.27■■■□□ 2.44
SMPD4-210ENST00000441135 FAM9AQ8IZU1 332 aaPredicted RBP30.24■■■□□ 2.43
SMPD4-210ENST00000441135 KIF21BO75037 1637 aa30.24■■■□□ 2.43
SMPD4-210ENST00000441135 SAMD9Q5K651 1589 aa30.21■■■□□ 2.43
SMPD4-210ENST00000441135 EPRSP07814 1512 aaKnown RBP30.2■■■□□ 2.42
SMPD4-210ENST00000441135 WDR7Q9Y4E6 1490 aa30.18■■■□□ 2.42
SMPD4-210ENST00000441135 TSPOAP1O95153 1857 aa30.17■■■□□ 2.42
SMPD4-210ENST00000441135 KDM6BO15054 1643 aa30.15■■■□□ 2.42
SMPD4-210ENST00000441135 P3H3Q8IVL6 736 aa30.14■■■□□ 2.42
SMPD4-210ENST00000441135 MAP3K4Q9Y6R4 1608 aa30.1■■■□□ 2.41
SMPD4-210ENST00000441135 PPRC1Q5VV67 1664 aaKnown RBP30.08■■■□□ 2.41
SMPD4-210ENST00000441135 TEX14Q8IWB6 1497 aa30.05■■■□□ 2.4
SMPD4-210ENST00000441135 EFCAB5A4FU69 1503 aa30.03■■■□□ 2.4
SMPD4-210ENST00000441135 RAPGEF6Q8TEU7 1601 aa30■■■□□ 2.39
SMPD4-210ENST00000441135 RANGAP1P46060 587 aaPredicted RBP30■■■□□ 2.39
SMPD4-210ENST00000441135 ATP10BO94823 1461 aa29.99■■■□□ 2.39
SMPD4-210ENST00000441135 FHOD3Q2V2M9 1422 aa29.99■■■□□ 2.39
SMPD4-210ENST00000441135 AEBP2Q6ZN18 517 aaPredicted RBP29.97■■■□□ 2.39
SMPD4-210ENST00000441135 ARID3CA6NKF2 412 aa29.94■■■□□ 2.38
SMPD4-210ENST00000441135 KCNH8Q96L42 1107 aa29.94■■■□□ 2.38
SMPD4-210ENST00000441135 CFAP43Q8NDM7 1665 aa29.94■■■□□ 2.38
SMPD4-210ENST00000441135 CD109Q6YHK3 1445 aa29.93■■■□□ 2.38
SMPD4-210ENST00000441135 UBTFP17480 764 aaKnown RBP29.92■■■□□ 2.38
SMPD4-210ENST00000441135 MAGI3Q5TCQ9 1506 aa29.91■■■□□ 2.38
SMPD4-210ENST00000441135 NUP153P49790 1475 aaKnown RBP29.91■■■□□ 2.38
SMPD4-210ENST00000441135 COL17A1Q9UMD9 1497 aaPredicted RBP29.86■■■□□ 2.37
SMPD4-210ENST00000441135 EHMT2Q96KQ7 1210 aa29.84■■■□□ 2.37
SMPD4-210ENST00000441135 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.82■■■□□ 2.36
SMPD4-210ENST00000441135 HNRNPUL2Q1KMD3 747 aaKnown RBP29.82■■■□□ 2.36
SMPD4-210ENST00000441135 ABCA9Q8IUA7 1624 aa29.78■■■□□ 2.36
SMPD4-210ENST00000441135 ARHGAP35Q9NRY4 1499 aa29.75■■■□□ 2.35
SMPD4-210ENST00000441135 FMN1Q68DA7 1419 aa29.75■■■□□ 2.35
SMPD4-210ENST00000441135 PLEKHD1A6NEE1 506 aa29.7■■■□□ 2.35
SMPD4-210ENST00000441135 PHLDB1Q86UU1 1377 aa29.69■■■□□ 2.34
SMPD4-210ENST00000441135 ARAP3Q8WWN8 1544 aa29.67■■■□□ 2.34
SMPD4-210ENST00000441135 HECW1Q76N89 1606 aa29.64■■■□□ 2.34
SMPD4-210ENST00000441135 NEO1Q92859 1461 aa29.63■■■□□ 2.33
SMPD4-210ENST00000441135 KDM4FA0A1W2PPD8 638 aa29.63■■■□□ 2.33
SMPD4-210ENST00000441135 CDK13Q14004 1512 aaKnown RBP29.62■■■□□ 2.33
SMPD4-210ENST00000441135 ATP1B4Q9UN42 357 aaPredicted RBP29.55■■■□□ 2.32
SMPD4-210ENST00000441135 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.55■■■□□ 2.32
SMPD4-210ENST00000441135 ADGRL1O94910 1474 aa29.55■■■□□ 2.32
SMPD4-210ENST00000441135 CDK11AQ9UQ88 783 aaPredicted RBP29.51■■■□□ 2.31
SMPD4-210ENST00000441135 TTC37Q6PGP7 1564 aa29.51■■■□□ 2.31
SMPD4-210ENST00000441135 CFAP74Q9C0B2 1584 aa29.48■■■□□ 2.31
SMPD4-210ENST00000441135 FANCAO15360 1455 aa29.47■■■□□ 2.31
SMPD4-210ENST00000441135 CLIP1P30622 1438 aa29.45■■■□□ 2.31
SMPD4-210ENST00000441135 CASKIN1Q8WXD9 1431 aa29.45■■■□□ 2.31
SMPD4-210ENST00000441135 RAPGEF3O95398 923 aa29.43■■■□□ 2.3
SMPD4-210ENST00000441135 AKNAQ7Z591 1439 aa29.43■■■□□ 2.3
SMPD4-210ENST00000441135 TROQ12816 1431 aaPredicted RBP29.42■■■□□ 2.3
SMPD4-210ENST00000441135 PCF11O94913 1555 aaKnown RBP29.42■■■□□ 2.3
SMPD4-210ENST00000441135 FRMPD1Q5SYB0 1578 aa29.41■■■□□ 2.3
SMPD4-210ENST00000441135 DENND4BO75064 1496 aaPredicted RBP29.41■■■□□ 2.3
SMPD4-210ENST00000441135 CCDC18Q5T9S5 1454 aa29.41■■■□□ 2.3
SMPD4-210ENST00000441135 PLCH2O75038 1416 aa29.39■■■□□ 2.3
SMPD4-210ENST00000441135 KIF14Q15058 1648 aa29.39■■■□□ 2.3
SMPD4-210ENST00000441135 FYCO1Q9BQS8 1478 aa29.37■■■□□ 2.29
SMPD4-210ENST00000441135 LRRIQ1Q96JM4 1722 aa29.35■■■□□ 2.29
SMPD4-210ENST00000441135 CEP162Q5TB80 1403 aa29.32■■■□□ 2.28
SMPD4-210ENST00000441135 RICTORQ6R327 1708 aa29.31■■■□□ 2.28
SMPD4-210ENST00000441135 MYO5CQ9NQX4 1742 aa29.31■■■□□ 2.28
SMPD4-210ENST00000441135 ZMYM4Q5VZL5 1548 aa29.29■■■□□ 2.28
SMPD4-210ENST00000441135 ARHGEF40Q8TER5 1519 aa29.29■■■□□ 2.28
SMPD4-210ENST00000441135 EFCAB2Q5VUJ9 269 aa29.28■■■□□ 2.28
SMPD4-210ENST00000441135 POGZQ7Z3K3 1410 aa29.25■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms