RNA–Protein interactions for RNA: ENST00000441090.6

LRCH3-207, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 2 BASIC

Gene LRCH3, Length 2,034 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-207ENST00000441090 CCNB3Q8WWL7 1395 aa28.06■■■□□ 2.08
LRCH3-207ENST00000441090 PCF11O94913 1555 aaKnown RBP28.04■■■□□ 2.08
LRCH3-207ENST00000441090 DIEXFQ68CQ4 756 aaKnown RBP28.03■■■□□ 2.08
LRCH3-207ENST00000441090 DNAJC5BQ9UF47 199 aa28.02■■■□□ 2.08
LRCH3-207ENST00000441090 LRRC9Q6ZRR7 1453 aa28.01■■■□□ 2.07
LRCH3-207ENST00000441090 CLSPNQ9HAW4 1339 aa28■■■□□ 2.07
LRCH3-207ENST00000441090 ZNF316A6NFI3 1004 aaPredicted RBP27.99■■■□□ 2.07
LRCH3-207ENST00000441090 DHX57Q6P158 1386 aaKnown RBP27.97■■■□□ 2.07
LRCH3-207ENST00000441090 GAPVD1Q14C86 1478 aa27.96■■■□□ 2.07
LRCH3-207ENST00000441090 FHOD3Q2V2M9 1422 aa27.95■■■□□ 2.06
LRCH3-207ENST00000441090 FYCO1Q9BQS8 1478 aa27.94■■■□□ 2.06
LRCH3-207ENST00000441090 AQRO60306 1485 aaKnown RBP eCLIP27.93■■■□□ 2.062e-6■■□□□ 12.8
LRCH3-207ENST00000441090 TDRD9Q8NDG6 1382 aaKnown RBP27.93■■■□□ 2.06
LRCH3-207ENST00000441090 TARBP1Q13395 1621 aaKnown RBP27.93■■■□□ 2.06
LRCH3-207ENST00000441090 P3H3Q8IVL6 736 aa27.9■■■□□ 2.06
LRCH3-207ENST00000441090 CASKIN1Q8WXD9 1431 aa27.89■■■□□ 2.06
LRCH3-207ENST00000441090 SAMD9Q5K651 1589 aa27.86■■■□□ 2.05
LRCH3-207ENST00000441090 PHLDB1Q86UU1 1377 aa27.84■■■□□ 2.05
LRCH3-207ENST00000441090 FMN1Q68DA7 1419 aa27.83■■■□□ 2.05
LRCH3-207ENST00000441090 PBRM1Q86U86 1689 aa27.81■■■□□ 2.04
LRCH3-207ENST00000441090 SNAPC4Q5SXM2 1469 aa27.78■■■□□ 2.04
LRCH3-207ENST00000441090 MRC2Q9UBG0 1479 aa27.75■■■□□ 2.03
LRCH3-207ENST00000441090 ITGAEP38570 1179 aa27.74■■■□□ 2.03
LRCH3-207ENST00000441090 ATP1B4Q9UN42 357 aaPredicted RBP27.74■■■□□ 2.03
LRCH3-207ENST00000441090 LRRIQ1Q96JM4 1722 aa27.7■■■□□ 2.03
LRCH3-207ENST00000441090 RAB3GAP2Q9H2M9 1393 aa27.7■■■□□ 2.03
LRCH3-207ENST00000441090 THOC2Q8NI27 1593 aaKnown RBP27.67■■■□□ 2.02
LRCH3-207ENST00000441090 SETD5Q9C0A6 1442 aa27.66■■■□□ 2.02
LRCH3-207ENST00000441090 ADAMTS12P58397 1594 aa27.66■■■□□ 2.02
LRCH3-207ENST00000441090 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.65■■■□□ 2.02
LRCH3-207ENST00000441090 GRIN2BQ13224 1484 aa27.64■■■□□ 2.01
LRCH3-207ENST00000441090 FAM50AQ14320 339 aaKnown RBP27.61■■■□□ 2.01
LRCH3-207ENST00000441090 MAPKBP1O60336 1514 aa27.59■■■□□ 2.01
LRCH3-207ENST00000441090 SCAF1Q9H7N4 1312 aaKnown RBP27.59■■■□□ 2.01
LRCH3-207ENST00000441090 WDR62O43379 1518 aa27.58■■■□□ 2.01
LRCH3-207ENST00000441090 IQGAP2Q13576 1575 aa27.57■■■□□ 2
LRCH3-207ENST00000441090 ACIN1Q9UKV3 1341 aaKnown RBP27.56■■■□□ 2
LRCH3-207ENST00000441090 FGD6Q6ZV73 1430 aa27.55■■■□□ 2
LRCH3-207ENST00000441090 MTUS2Q5JR59 1369 aa27.55■■■□□ 2
LRCH3-207ENST00000441090 IFT140Q96RY7 1462 aa27.54■■■□□ 2
LRCH3-207ENST00000441090 SUPT6HQ7KZ85 1726 aaKnown RBP27.52■■■□□ 2
LRCH3-207ENST00000441090 EHBP1L1Q8N3D4 1523 aa27.51■■□□□ 1.99
LRCH3-207ENST00000441090 CENPBP07199 599 aaPredicted RBP27.5■■□□□ 1.99
LRCH3-207ENST00000441090 NEUROD1Q13562 356 aa27.49■■□□□ 1.99
LRCH3-207ENST00000441090 CCDC18Q5T9S5 1454 aa27.47■■□□□ 1.99
LRCH3-207ENST00000441090 HECW1Q76N89 1606 aa27.47■■□□□ 1.99
LRCH3-207ENST00000441090 NCOA2Q15596 1464 aa27.46■■□□□ 1.99
LRCH3-207ENST00000441090 ZNF608Q9ULD9 1512 aaPredicted RBP27.45■■□□□ 1.99
LRCH3-207ENST00000441090 MIER1Q8N108 512 aa27.45■■□□□ 1.98
LRCH3-207ENST00000441090 MYOM3Q5VTT5 1437 aa27.42■■□□□ 1.98
LRCH3-207ENST00000441090 UGGT2Q9NYU1 1516 aa27.42■■□□□ 1.98
LRCH3-207ENST00000441090 ARHGEF11O15085 1522 aa27.41■■□□□ 1.98
LRCH3-207ENST00000441090 MAGI3Q5TCQ9 1506 aa27.4■■□□□ 1.98
LRCH3-207ENST00000441090 EIF4G3O43432 1585 aaKnown RBP27.38■■□□□ 1.97
LRCH3-207ENST00000441090 PTPN23Q9H3S7 1636 aa27.34■■□□□ 1.97
LRCH3-207ENST00000441090 EPRSP07814 1512 aaKnown RBP27.34■■□□□ 1.97
LRCH3-207ENST00000441090 HFM1A2PYH4 1435 aa27.32■■□□□ 1.96
LRCH3-207ENST00000441090 PTPRKQ15262 1439 aa27.32■■□□□ 1.96
LRCH3-207ENST00000441090 KIAA0586Q9BVV6 1533 aa27.32■■□□□ 1.96
LRCH3-207ENST00000441090 KIAA0556O60303 1618 aa27.28■■□□□ 1.96
LRCH3-207ENST00000441090 ERCC6Q03468 1493 aa27.28■■□□□ 1.96
LRCH3-207ENST00000441090 GRIN2AQ12879 1464 aa27.28■■□□□ 1.96
LRCH3-207ENST00000441090 TCOF1Q13428 1488 aaKnown RBP27.26■■□□□ 1.95
LRCH3-207ENST00000441090 CDK13Q14004 1512 aaKnown RBP27.25■■□□□ 1.95
LRCH3-207ENST00000441090 DISP1Q96F81 1524 aa27.25■■□□□ 1.95
LRCH3-207ENST00000441090 TIMELESSQ9UNS1 1208 aa27.24■■□□□ 1.95
LRCH3-207ENST00000441090 SIN3AQ96ST3 1273 aa27.23■■□□□ 1.95
LRCH3-207ENST00000441090 NAIPQ13075 1403 aa27.22■■□□□ 1.95
LRCH3-207ENST00000441090 MAGI1Q96QZ7 1491 aaPredicted RBP27.21■■□□□ 1.95
LRCH3-207ENST00000441090 UACAQ9BZF9 1416 aa27.21■■□□□ 1.95
LRCH3-207ENST00000441090 YTHDC1Q96MU7 727 aaKnown RBP27.19■■□□□ 1.94
LRCH3-207ENST00000441090 GCC2Q8IWJ2 1684 aa27.17■■□□□ 1.94
LRCH3-207ENST00000441090 MIA2Q96PC5 1412 aa27.16■■□□□ 1.94
LRCH3-207ENST00000441090 RAPGEF6Q8TEU7 1601 aa27.15■■□□□ 1.94
LRCH3-207ENST00000441090 GTF3C3Q9Y5Q9 886 aa27.15■■□□□ 1.94
LRCH3-207ENST00000441090 SYNJ2O15056 1496 aa27.13■■□□□ 1.93
LRCH3-207ENST00000441090 CEP170Q5SW79 1584 aa27.12■■□□□ 1.93
LRCH3-207ENST00000441090 NUP153P49790 1475 aaKnown RBP27.1■■□□□ 1.93
LRCH3-207ENST00000441090 AKNAQ7Z591 1439 aa27.1■■□□□ 1.93
LRCH3-207ENST00000441090 PPP1R15AO75807 674 aaPredicted RBP27.05■■□□□ 1.92
LRCH3-207ENST00000441090 ARID3CA6NKF2 412 aa27.02■■□□□ 1.92
LRCH3-207ENST00000441090 CHMP7Q8WUX9 453 aaPredicted RBP27.02■■□□□ 1.92
LRCH3-207ENST00000441090 NUP160Q12769 1436 aa27■■□□□ 1.91
LRCH3-207ENST00000441090 TONSLQ96HA7 1378 aa26.99■■□□□ 1.91
LRCH3-207ENST00000441090 RRP7BPQ9NSQ0 103 aa26.97■■□□□ 1.91
LRCH3-207ENST00000441090 KDM6BO15054 1643 aa26.97■■□□□ 1.91
LRCH3-207ENST00000441090 DNMT1P26358 1616 aaKnown RBP26.96■■□□□ 1.91
LRCH3-207ENST00000441090 CHIC2Q9UKJ5 165 aa26.95■■□□□ 1.91
LRCH3-207ENST00000441090 CDK11AQ9UQ88 783 aaPredicted RBP26.94■■□□□ 1.9
LRCH3-207ENST00000441090 DAPK1P53355 1430 aa26.92■■□□□ 1.9
LRCH3-207ENST00000441090 CARMIL2Q6F5E8 1435 aa26.92■■□□□ 1.9
LRCH3-207ENST00000441090 ADCY10Q96PN6 1610 aa26.91■■□□□ 1.9
LRCH3-207ENST00000441090 DENND4BO75064 1496 aaPredicted RBP26.91■■□□□ 1.9
LRCH3-207ENST00000441090 TROQ12816 1431 aaPredicted RBP26.91■■□□□ 1.9
LRCH3-207ENST00000441090 PLB1Q6P1J6 1458 aa26.9■■□□□ 1.9
LRCH3-207ENST00000441090 ITSN2Q9NZM3 1697 aa26.9■■□□□ 1.9
LRCH3-207ENST00000441090 ROCK1Q13464 1354 aa26.89■■□□□ 1.9
LRCH3-207ENST00000441090 FBLN2P98095 1184 aa26.89■■□□□ 1.89
LRCH3-207ENST00000441090 KDM5BQ9UGL1 1544 aa26.88■■□□□ 1.89
LRCH3-207ENST00000441090 ABCC5O15440 1437 aa26.86■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms