RNA–Protein interactions for RNA: ENST00000440760.5

SNX17-203, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,955 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-203ENST00000440760 GRIN2AQ12879 1464 aa30.09■■■□□ 2.41
SNX17-203ENST00000440760 VPS8Q8N3P4 1428 aa30.09■■■□□ 2.41
SNX17-203ENST00000440760 SYNJ2O15056 1496 aa30.08■■■□□ 2.41
SNX17-203ENST00000440760 PPARGC1BQ86YN6 1023 aaKnown RBP30.02■■■□□ 2.4
SNX17-203ENST00000440760 FBLN2P98095 1184 aa29.99■■■□□ 2.39
SNX17-203ENST00000440760 CHMP7Q8WUX9 453 aaPredicted RBP29.99■■■□□ 2.39
SNX17-203ENST00000440760 IQGAP2Q13576 1575 aa29.99■■■□□ 2.39
SNX17-203ENST00000440760 EFCAB5A4FU69 1503 aa29.97■■■□□ 2.39
SNX17-203ENST00000440760 CEP170Q5SW79 1584 aa29.97■■■□□ 2.39
SNX17-203ENST00000440760 P3H3Q8IVL6 736 aa29.95■■■□□ 2.39
SNX17-203ENST00000440760 SAMD9Q5K651 1589 aa29.93■■■□□ 2.38
SNX17-203ENST00000440760 FHOD3Q2V2M9 1422 aa29.93■■■□□ 2.38
SNX17-203ENST00000440760 CHD1O14646 1710 aa29.91■■■□□ 2.38
SNX17-203ENST00000440760 KIAA0586Q9BVV6 1533 aa29.88■■■□□ 2.37
SNX17-203ENST00000440760 TTBK1Q5TCY1 1321 aaPredicted RBP29.86■■■□□ 2.37
SNX17-203ENST00000440760 NUP160Q12769 1436 aa29.85■■■□□ 2.37
SNX17-203ENST00000440760 UGGT2Q9NYU1 1516 aa29.8■■■□□ 2.36
SNX17-203ENST00000440760 PCF11O94913 1555 aaKnown RBP29.8■■■□□ 2.36
SNX17-203ENST00000440760 PCGF6Q9BYE7 350 aa29.79■■■□□ 2.36
SNX17-203ENST00000440760 TRIM26Q12899 539 aaPredicted RBP29.72■■■□□ 2.35
SNX17-203ENST00000440760 KIAA0556O60303 1618 aa29.71■■■□□ 2.35
SNX17-203ENST00000440760 APLP2Q06481 763 aa29.71■■■□□ 2.35
SNX17-203ENST00000440760 DISP1Q96F81 1524 aa29.7■■■□□ 2.35
SNX17-203ENST00000440760 FMN1Q68DA7 1419 aa29.67■■■□□ 2.34
SNX17-203ENST00000440760 FYCO1Q9BQS8 1478 aa29.64■■■□□ 2.34
SNX17-203ENST00000440760 CASKIN1Q8WXD9 1431 aa29.63■■■□□ 2.33
SNX17-203ENST00000440760 TIAM1Q13009 1591 aa29.61■■■□□ 2.33
SNX17-203ENST00000440760 ATP1B4Q9UN42 357 aaPredicted RBP29.6■■■□□ 2.33
SNX17-203ENST00000440760 CFAP43Q8NDM7 1665 aa29.59■■■□□ 2.33
SNX17-203ENST00000440760 JPH4Q96JJ6 628 aa29.58■■■□□ 2.33
SNX17-203ENST00000440760 KANK4Q5T7N3 995 aaPredicted RBP29.57■■■□□ 2.32
SNX17-203ENST00000440760 LRRIQ1Q96JM4 1722 aa29.57■■■□□ 2.32
SNX17-203ENST00000440760 MAP3K1Q13233 1512 aa29.51■■■□□ 2.32
SNX17-203ENST00000440760 SHROOM2Q13796 1616 aa29.49■■■□□ 2.31
SNX17-203ENST00000440760 CLASP1Q7Z460 1538 aa29.49■■■□□ 2.31
SNX17-203ENST00000440760 CARMIL2Q6F5E8 1435 aa29.49■■■□□ 2.31
SNX17-203ENST00000440760 PRG4Q92954 1404 aaPredicted RBP29.46■■■□□ 2.31
SNX17-203ENST00000440760 HECW1Q76N89 1606 aa29.46■■■□□ 2.31
SNX17-203ENST00000440760 LRRC9Q6ZRR7 1453 aa29.43■■■□□ 2.3
SNX17-203ENST00000440760 RAPGEF6Q8TEU7 1601 aa29.4■■■□□ 2.3
SNX17-203ENST00000440760 ERCC6L2Q5T890 1561 aa29.4■■■□□ 2.3
SNX17-203ENST00000440760 PLB1Q6P1J6 1458 aa29.35■■■□□ 2.29
SNX17-203ENST00000440760 CDK13Q14004 1512 aaKnown RBP29.35■■■□□ 2.29
SNX17-203ENST00000440760 ARID3CA6NKF2 412 aa29.34■■■□□ 2.29
SNX17-203ENST00000440760 EPRSP07814 1512 aaKnown RBP29.34■■■□□ 2.29
SNX17-203ENST00000440760 CCDC18Q5T9S5 1454 aa29.33■■■□□ 2.29
SNX17-203ENST00000440760 NUP153P49790 1475 aaKnown RBP29.32■■■□□ 2.28
SNX17-203ENST00000440760 MAGI3Q5TCQ9 1506 aa29.28■■■□□ 2.28
SNX17-203ENST00000440760 ABCA8O94911 1581 aa29.26■■■□□ 2.27
SNX17-203ENST00000440760 MTUS2Q5JR59 1369 aa29.24■■■□□ 2.27
SNX17-203ENST00000440760 PTPRGP23470 1445 aa29.23■■■□□ 2.27
SNX17-203ENST00000440760 EHBP1L1Q8N3D4 1523 aa29.22■■■□□ 2.27
SNX17-203ENST00000440760 PHLDB1Q86UU1 1377 aa29.19■■■□□ 2.26
SNX17-203ENST00000440760 OSCARQ8IYS5 282 aa29.16■■■□□ 2.26
SNX17-203ENST00000440760 RRBP1Q9P2E9 1410 aaKnown RBP29.15■■■□□ 2.26
SNX17-203ENST00000440760 SUPT6HQ7KZ85 1726 aaKnown RBP29.15■■■□□ 2.26
SNX17-203ENST00000440760 NCOA2Q15596 1464 aa29.11■■■□□ 2.25
SNX17-203ENST00000440760 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.11■■■□□ 2.25
SNX17-203ENST00000440760 HNRNPUL2Q1KMD3 747 aaKnown RBP29.11■■■□□ 2.25
SNX17-203ENST00000440760 CCNB3Q8WWL7 1395 aa29.08■■■□□ 2.25
SNX17-203ENST00000440760 UACAQ9BZF9 1416 aa29.07■■■□□ 2.24
SNX17-203ENST00000440760 ATP10BO94823 1461 aa29.05■■■□□ 2.24
SNX17-203ENST00000440760 ARHGEF11O15085 1522 aa29.04■■■□□ 2.24
SNX17-203ENST00000440760 ABCC2Q92887 1545 aa29.02■■■□□ 2.24
SNX17-203ENST00000440760 TROQ12816 1431 aaPredicted RBP28.97■■■□□ 2.23
SNX17-203ENST00000440760 FGD6Q6ZV73 1430 aa28.97■■■□□ 2.23
SNX17-203ENST00000440760 MYOM3Q5VTT5 1437 aa28.96■■■□□ 2.23
SNX17-203ENST00000440760 CDK11AQ9UQ88 783 aaPredicted RBP28.96■■■□□ 2.23
SNX17-203ENST00000440760 KIF14Q15058 1648 aa28.96■■■□□ 2.23
SNX17-203ENST00000440760 ADCY10Q96PN6 1610 aa28.92■■■□□ 2.22
SNX17-203ENST00000440760 FAM50AQ14320 339 aaKnown RBP28.92■■■□□ 2.22
SNX17-203ENST00000440760 ITGAEP38570 1179 aa28.9■■■□□ 2.22
SNX17-203ENST00000440760 UHRF1BP1LA0JNW5 1464 aa28.89■■■□□ 2.22
SNX17-203ENST00000440760 ZCCHC11Q5TAX3 1644 aaKnown RBP28.88■■■□□ 2.21
SNX17-203ENST00000440760 PTPN23Q9H3S7 1636 aa28.86■■■□□ 2.21
SNX17-203ENST00000440760 PLEKHD1A6NEE1 506 aa28.84■■■□□ 2.21
SNX17-203ENST00000440760 KDM5BQ9UGL1 1544 aa28.81■■■□□ 2.2
SNX17-203ENST00000440760 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.78■■■□□ 2.2
SNX17-203ENST00000440760 ITSN2Q9NZM3 1697 aa28.77■■■□□ 2.2
SNX17-203ENST00000440760 HRCP23327 699 aa28.76■■■□□ 2.19
SNX17-203ENST00000440760 TCOF1Q13428 1488 aaKnown RBP28.76■■■□□ 2.19
SNX17-203ENST00000440760 ABCC10Q5T3U5 1492 aa28.75■■■□□ 2.19
SNX17-203ENST00000440760 MIA2Q96PC5 1412 aa28.74■■■□□ 2.19
SNX17-203ENST00000440760 CDC42BPAQ5VT25 1732 aa28.74■■■□□ 2.19
SNX17-203ENST00000440760 GPATCH8Q9UKJ3 1502 aaKnown RBP28.72■■■□□ 2.19
SNX17-203ENST00000440760 TTC37Q6PGP7 1564 aa28.69■■■□□ 2.18
SNX17-203ENST00000440760 RIMBP3CA6NJZ7 1639 aa28.68■■■□□ 2.18
SNX17-203ENST00000440760 RIMBP3BA6NNM3 1639 aa28.68■■■□□ 2.18
SNX17-203ENST00000440760 RIMBP3Q9UFD9 1639 aa28.68■■■□□ 2.18
SNX17-203ENST00000440760 PTPRKQ15262 1439 aa28.67■■■□□ 2.18
SNX17-203ENST00000440760 ZNF644Q9H582 1327 aaPredicted RBP28.65■■■□□ 2.18
SNX17-203ENST00000440760 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.64■■■□□ 2.18
SNX17-203ENST00000440760 CCER1Q8TC90 406 aaPredicted RBP28.63■■■□□ 2.17
SNX17-203ENST00000440760 CAMSAP2Q08AD1 1489 aa28.63■■■□□ 2.17
SNX17-203ENST00000440760 CFDP1Q9UEE9 299 aaPredicted RBP28.62■■■□□ 2.17
SNX17-203ENST00000440760 PREX2Q70Z35 1606 aa28.61■■■□□ 2.17
SNX17-203ENST00000440760 KCNH8Q96L42 1107 aa28.61■■■□□ 2.17
SNX17-203ENST00000440760 CDC42BPBQ9Y5S2 1711 aa28.6■■■□□ 2.17
SNX17-203ENST00000440760 ZNF777Q9ULD5 760 aaPredicted RBP28.57■■■□□ 2.16
SNX17-203ENST00000440760 WDR7Q9Y4E6 1490 aa28.57■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms