RNA–Protein interactions for RNA: ENST00000440571.5

CNOT3-203, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 5

Gene CNOT3, Length 1,125 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-203ENST00000440571 CYB5RLQ6IPT4 315 aa37.56■■■■□ 3.6
CNOT3-203ENST00000440571 FAM9AQ8IZU1 332 aaPredicted RBP37.56■■■■□ 3.6
CNOT3-203ENST00000440571 EEA1Q15075 1411 aa37.53■■■■□ 3.6
CNOT3-203ENST00000440571 KIAA0586Q9BVV6 1533 aa37.48■■■■□ 3.59
CNOT3-203ENST00000440571 PRXQ9BXM0 1461 aa37.44■■■■□ 3.58
CNOT3-203ENST00000440571 PRG4Q92954 1404 aaPredicted RBP37.39■■■■□ 3.58
CNOT3-203ENST00000440571 ARAP1Q96P48 1450 aa37.39■■■■□ 3.58
CNOT3-203ENST00000440571 SHROOM2Q13796 1616 aa37.32■■■■□ 3.57
CNOT3-203ENST00000440571 ERCC6L2Q5T890 1561 aa37.29■■■■□ 3.56
CNOT3-203ENST00000440571 IQGAP2Q13576 1575 aa37.18■■■■□ 3.54
CNOT3-203ENST00000440571 CARMIL2Q6F5E8 1435 aa37.14■■■■□ 3.54
CNOT3-203ENST00000440571 EHMT2Q96KQ7 1210 aa37.09■■■■□ 3.53
CNOT3-203ENST00000440571 TTBK1Q5TCY1 1321 aaPredicted RBP37.05■■■■□ 3.52
CNOT3-203ENST00000440571 UGGT2Q9NYU1 1516 aa37.02■■■■□ 3.52
CNOT3-203ENST00000440571 TNIKQ9UKE5 1360 aa37.02■■■■□ 3.52
CNOT3-203ENST00000440571 UBTFP17480 764 aaKnown RBP37.01■■■■□ 3.52
CNOT3-203ENST00000440571 PTPRGP23470 1445 aa37.01■■■■□ 3.51
CNOT3-203ENST00000440571 KIF21BO75037 1637 aa36.98■■■■□ 3.51
CNOT3-203ENST00000440571 DISP1Q96F81 1524 aa36.97■■■■□ 3.51
CNOT3-203ENST00000440571 CTTNBP2Q8WZ74 1663 aa36.94■■■■□ 3.5
CNOT3-203ENST00000440571 RANGAP1P46060 587 aaPredicted RBP36.91■■■■□ 3.5
CNOT3-203ENST00000440571 GOLGA3Q08378 1498 aa36.9■■■■□ 3.5
CNOT3-203ENST00000440571 NPM1P06748 294 aaKnown RBP eCLIP36.85■■■■□ 3.49
CNOT3-203ENST00000440571 P3H3Q8IVL6 736 aa36.85■■■■□ 3.49
CNOT3-203ENST00000440571 KIAA0556O60303 1618 aa36.8■■■■□ 3.48
CNOT3-203ENST00000440571 TRHP20396 242 aaPredicted RBP36.78■■■■□ 3.48
CNOT3-203ENST00000440571 UACAQ9BZF9 1416 aa36.71■■■■□ 3.47
CNOT3-203ENST00000440571 ADCY10Q96PN6 1610 aa36.63■■■■□ 3.45
CNOT3-203ENST00000440571 UHRF1BP1LA0JNW5 1464 aa36.6■■■■□ 3.45
CNOT3-203ENST00000440571 SAMD9Q5K651 1589 aa36.57■■■■□ 3.45
CNOT3-203ENST00000440571 PLB1Q6P1J6 1458 aa36.55■■■■□ 3.44
CNOT3-203ENST00000440571 ABCC2Q92887 1545 aa36.54■■■■□ 3.44
CNOT3-203ENST00000440571 FHOD3Q2V2M9 1422 aa36.53■■■■□ 3.44
CNOT3-203ENST00000440571 EFCAB5A4FU69 1503 aa36.49■■■■□ 3.43
CNOT3-203ENST00000440571 LOC105371045A0A1W2PR82 267 aa36.45■■■■□ 3.43
CNOT3-203ENST00000440571 ABCA8O94911 1581 aa36.43■■■■□ 3.42
CNOT3-203ENST00000440571 MAPKBP1O60336 1514 aa36.41■■■■□ 3.42
CNOT3-203ENST00000440571 KDM5BQ9UGL1 1544 aa36.41■■■■□ 3.42
CNOT3-203ENST00000440571 ARHGAP35Q9NRY4 1499 aa36.4■■■■□ 3.42
CNOT3-203ENST00000440571 FAM69CQ0P6D2 419 aa36.4■■■■□ 3.42
CNOT3-203ENST00000440571 ARID3CA6NKF2 412 aa36.38■■■■□ 3.41
CNOT3-203ENST00000440571 ASXL2Q76L83 1435 aa36.34■■■■□ 3.41
CNOT3-203ENST00000440571 ABCC10Q5T3U5 1492 aa36.31■■■■□ 3.4
CNOT3-203ENST00000440571 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP36.29■■■■□ 3.4
CNOT3-203ENST00000440571 HNRNPUL2Q1KMD3 747 aaKnown RBP36.29■■■■□ 3.4
CNOT3-203ENST00000440571 CLIP1P30622 1438 aa36.28■■■■□ 3.4
CNOT3-203ENST00000440571 FMN1Q68DA7 1419 aa36.27■■■■□ 3.4
CNOT3-203ENST00000440571 ATP1B4Q9UN42 357 aaPredicted RBP36.27■■■■□ 3.4
CNOT3-203ENST00000440571 ATP10BO94823 1461 aa36.25■■■■□ 3.39
CNOT3-203ENST00000440571 ZCCHC11Q5TAX3 1644 aaKnown RBP36.24■■■■□ 3.39
CNOT3-203ENST00000440571 RAPGEF6Q8TEU7 1601 aa36.23■■■■□ 3.39
CNOT3-203ENST00000440571 KCNH8Q96L42 1107 aa36.19■■■■□ 3.38
CNOT3-203ENST00000440571 NUP153P49790 1475 aaKnown RBP36.18■■■■□ 3.38
CNOT3-203ENST00000440571 WDR7Q9Y4E6 1490 aa36.13■■■■□ 3.37
CNOT3-203ENST00000440571 CEP162Q5TB80 1403 aa36.13■■■■□ 3.37
CNOT3-203ENST00000440571 DIP2BQ9P265 1576 aa36.12■■■■□ 3.37
CNOT3-203ENST00000440571 PLEKHD1A6NEE1 506 aa36.11■■■■□ 3.37
CNOT3-203ENST00000440571 EPRSP07814 1512 aaKnown RBP36.09■■■■□ 3.37
CNOT3-203ENST00000440571 KIF13AQ9H1H9 1805 aa36.05■■■■□ 3.36
CNOT3-203ENST00000440571 GLI2P10070 1586 aa36.01■■■■□ 3.35
CNOT3-203ENST00000440571 CASKIN1Q8WXD9 1431 aa35.99■■■■□ 3.35
CNOT3-203ENST00000440571 CDK11AQ9UQ88 783 aaPredicted RBP35.98■■■■□ 3.35
CNOT3-203ENST00000440571 HECW1Q76N89 1606 aa35.94■■■■□ 3.34
CNOT3-203ENST00000440571 CDK13Q14004 1512 aaKnown RBP35.93■■■■□ 3.34
CNOT3-203ENST00000440571 CD109Q6YHK3 1445 aa35.89■■■■□ 3.34
CNOT3-203ENST00000440571 FYCO1Q9BQS8 1478 aa35.84■■■■□ 3.33
CNOT3-203ENST00000440571 PCF11O94913 1555 aaKnown RBP35.83■■■■□ 3.33
CNOT3-203ENST00000440571 TSPOAP1O95153 1857 aa35.8■■■■□ 3.32
CNOT3-203ENST00000440571 CCDC18Q5T9S5 1454 aa35.79■■■■□ 3.32
CNOT3-203ENST00000440571 MAP3K4Q9Y6R4 1608 aa35.77■■■■□ 3.32
CNOT3-203ENST00000440571 TEX14Q8IWB6 1497 aa35.75■■■■□ 3.31
CNOT3-203ENST00000440571 MAGI3Q5TCQ9 1506 aa35.72■■■■□ 3.31
CNOT3-203ENST00000440571 TROQ12816 1431 aaPredicted RBP35.71■■■■□ 3.31
CNOT3-203ENST00000440571 CFAP43Q8NDM7 1665 aa35.69■■■■□ 3.3
CNOT3-203ENST00000440571 VPS8Q8N3P4 1428 aa35.67■■■■□ 3.3
CNOT3-203ENST00000440571 ABCA9Q8IUA7 1624 aa35.67■■■■□ 3.3
CNOT3-203ENST00000440571 PPRC1Q5VV67 1664 aaKnown RBP35.65■■■■□ 3.3
CNOT3-203ENST00000440571 LRRIQ1Q96JM4 1722 aa35.62■■■■□ 3.29
CNOT3-203ENST00000440571 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP35.62■■■■□ 3.293e-6■■■■□ 22.7
CNOT3-203ENST00000440571 PHLDB1Q86UU1 1377 aa35.56■■■■□ 3.28
CNOT3-203ENST00000440571 MTUS2Q5JR59 1369 aa35.55■■■■□ 3.28
CNOT3-203ENST00000440571 KDM6BO15054 1643 aa35.55■■■■□ 3.28
CNOT3-203ENST00000440571 COL17A1Q9UMD9 1497 aaPredicted RBP35.52■■■■□ 3.28
CNOT3-203ENST00000440571 PLCH2O75038 1416 aa35.51■■■■□ 3.28
CNOT3-203ENST00000440571 KIF14Q15058 1648 aa35.5■■■■□ 3.27
CNOT3-203ENST00000440571 EFCAB2Q5VUJ9 269 aa35.49■■■■□ 3.27
CNOT3-203ENST00000440571 TTC37Q6PGP7 1564 aa35.48■■■■□ 3.27
CNOT3-203ENST00000440571 APLP2Q06481 763 aa35.48■■■■□ 3.27
CNOT3-203ENST00000440571 NEO1Q92859 1461 aa35.48■■■■□ 3.27
CNOT3-203ENST00000440571 FANCAO15360 1455 aa35.44■■■■□ 3.26
CNOT3-203ENST00000440571 AKNAQ7Z591 1439 aa35.42■■■■□ 3.26
CNOT3-203ENST00000440571 ARAP3Q8WWN8 1544 aa35.4■■■■□ 3.26
CNOT3-203ENST00000440571 RAPGEF3O95398 923 aa35.39■■■■□ 3.26
CNOT3-203ENST00000440571 KANK4Q5T7N3 995 aaPredicted RBP35.34■■■■□ 3.25
CNOT3-203ENST00000440571 CCNB3Q8WWL7 1395 aa35.33■■■■□ 3.25
CNOT3-203ENST00000440571 TIAM1Q13009 1591 aa35.33■■■■□ 3.25
CNOT3-203ENST00000440571 MAP3K1Q13233 1512 aa35.32■■■■□ 3.24
CNOT3-203ENST00000440571 EHBP1L1Q8N3D4 1523 aa35.32■■■■□ 3.24
CNOT3-203ENST00000440571 ARHGAP5Q13017 1502 aa35.31■■■■□ 3.24
CNOT3-203ENST00000440571 CFDP1Q9UEE9 299 aaPredicted RBP35.29■■■■□ 3.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms