RNA–Protein interactions for RNA: ENST00000440514.1

CPSF4-205, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-205ENST00000440514 ERCC6L2Q5T890 1561 aa30.35■■■□□ 2.45
CPSF4-205ENST00000440514 KIAA0586Q9BVV6 1533 aa30.3■■■□□ 2.44
CPSF4-205ENST00000440514 PRXQ9BXM0 1461 aa30.28■■■□□ 2.44
CPSF4-205ENST00000440514 EEA1Q15075 1411 aa30.26■■■□□ 2.43
CPSF4-205ENST00000440514 CYB5RLQ6IPT4 315 aa30.23■■■□□ 2.43
CPSF4-205ENST00000440514 PRG4Q92954 1404 aaPredicted RBP30.22■■■□□ 2.43
CPSF4-205ENST00000440514 IQGAP2Q13576 1575 aa30.2■■■□□ 2.43
CPSF4-205ENST00000440514 JPH4Q96JJ6 628 aa30.2■■■□□ 2.43
CPSF4-205ENST00000440514 CSRNP3Q8WYN3 585 aa30.19■■■□□ 2.42
CPSF4-205ENST00000440514 FAM9AQ8IZU1 332 aaPredicted RBP30.18■■■□□ 2.42
CPSF4-205ENST00000440514 CTTNBP2Q8WZ74 1663 aa30.17■■■□□ 2.42
CPSF4-205ENST00000440514 KIF21BO75037 1637 aa30.04■■■□□ 2.4
CPSF4-205ENST00000440514 UGGT2Q9NYU1 1516 aa30.01■■■□□ 2.4
CPSF4-205ENST00000440514 DISP1Q96F81 1524 aa29.97■■■□□ 2.39
CPSF4-205ENST00000440514 CARMIL2Q6F5E8 1435 aa29.96■■■□□ 2.39
CPSF4-205ENST00000440514 KIAA0556O60303 1618 aa29.94■■■□□ 2.38
CPSF4-205ENST00000440514 TNIKQ9UKE5 1360 aa29.87■■■□□ 2.37
CPSF4-205ENST00000440514 GOLGA3Q08378 1498 aa29.83■■■□□ 2.37
CPSF4-205ENST00000440514 PTPRGP23470 1445 aa29.83■■■□□ 2.37
CPSF4-205ENST00000440514 TTBK1Q5TCY1 1321 aaPredicted RBP29.83■■■□□ 2.37
CPSF4-205ENST00000440514 ADCY10Q96PN6 1610 aa29.82■■■□□ 2.36
CPSF4-205ENST00000440514 EHMT2Q96KQ7 1210 aa29.82■■■□□ 2.36
CPSF4-205ENST00000440514 SAMD9Q5K651 1589 aa29.76■■■□□ 2.35
CPSF4-205ENST00000440514 UBTFP17480 764 aaKnown RBP29.67■■■□□ 2.34
CPSF4-205ENST00000440514 RANGAP1P46060 587 aaPredicted RBP29.67■■■□□ 2.34
CPSF4-205ENST00000440514 UACAQ9BZF9 1416 aa29.65■■■□□ 2.34
CPSF4-205ENST00000440514 ABCC2Q92887 1545 aa29.65■■■□□ 2.34
CPSF4-205ENST00000440514 UHRF1BP1LA0JNW5 1464 aa29.63■■■□□ 2.33
CPSF4-205ENST00000440514 P3H3Q8IVL6 736 aa29.63■■■□□ 2.33
CPSF4-205ENST00000440514 PLB1Q6P1J6 1458 aa29.61■■■□□ 2.33
CPSF4-205ENST00000440514 EFCAB5A4FU69 1503 aa29.61■■■□□ 2.33
CPSF4-205ENST00000440514 TRHP20396 242 aaPredicted RBP29.6■■■□□ 2.33
CPSF4-205ENST00000440514 MAPKBP1O60336 1514 aa29.58■■■□□ 2.33
CPSF4-205ENST00000440514 ABCA8O94911 1581 aa29.58■■■□□ 2.33
CPSF4-205ENST00000440514 FHOD3Q2V2M9 1422 aa29.56■■■□□ 2.32
CPSF4-205ENST00000440514 NPM1P06748 294 aaKnown RBP eCLIP29.56■■■□□ 2.32
CPSF4-205ENST00000440514 ZCCHC11Q5TAX3 1644 aaKnown RBP29.51■■■□□ 2.31
CPSF4-205ENST00000440514 KDM5BQ9UGL1 1544 aa29.5■■■□□ 2.31
CPSF4-205ENST00000440514 KIF13AQ9H1H9 1805 aa29.48■■■□□ 2.31
CPSF4-205ENST00000440514 ARHGAP35Q9NRY4 1499 aa29.47■■■□□ 2.31
CPSF4-205ENST00000440514 RAPGEF6Q8TEU7 1601 aa29.45■■■□□ 2.31
CPSF4-205ENST00000440514 DIP2BQ9P265 1576 aa29.44■■■□□ 2.3
CPSF4-205ENST00000440514 ASXL2Q76L83 1435 aa29.41■■■□□ 2.3
CPSF4-205ENST00000440514 ABCC10Q5T3U5 1492 aa29.41■■■□□ 2.3
CPSF4-205ENST00000440514 ARID3CA6NKF2 412 aa29.33■■■□□ 2.29
CPSF4-205ENST00000440514 NUP153P49790 1475 aaKnown RBP29.33■■■□□ 2.29
CPSF4-205ENST00000440514 FAM69CQ0P6D2 419 aa29.29■■■□□ 2.28
CPSF4-205ENST00000440514 ATP10BO94823 1461 aa29.29■■■□□ 2.28
CPSF4-205ENST00000440514 CLIP1P30622 1438 aa29.28■■■□□ 2.28
CPSF4-205ENST00000440514 WDR7Q9Y4E6 1490 aa29.28■■■□□ 2.28
CPSF4-205ENST00000440514 FMN1Q68DA7 1419 aa29.27■■■□□ 2.28
CPSF4-205ENST00000440514 EPRSP07814 1512 aaKnown RBP29.25■■■□□ 2.27
CPSF4-205ENST00000440514 GLI2P10070 1586 aa29.23■■■□□ 2.27
CPSF4-205ENST00000440514 HECW1Q76N89 1606 aa29.22■■■□□ 2.27
CPSF4-205ENST00000440514 LOC105371045A0A1W2PR82 267 aa29.21■■■□□ 2.27
CPSF4-205ENST00000440514 CEP162Q5TB80 1403 aa29.19■■■□□ 2.26
CPSF4-205ENST00000440514 TSPOAP1O95153 1857 aa29.19■■■□□ 2.26
CPSF4-205ENST00000440514 PCF11O94913 1555 aaKnown RBP29.18■■■□□ 2.26
CPSF4-205ENST00000440514 CDK13Q14004 1512 aaKnown RBP29.17■■■□□ 2.26
CPSF4-205ENST00000440514 MAP3K4Q9Y6R4 1608 aa29.15■■■□□ 2.26
CPSF4-205ENST00000440514 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.13■■■□□ 2.25
CPSF4-205ENST00000440514 HNRNPUL2Q1KMD3 747 aaKnown RBP29.13■■■□□ 2.25
CPSF4-205ENST00000440514 PPRC1Q5VV67 1664 aaKnown RBP29.12■■■□□ 2.25
CPSF4-205ENST00000440514 LRRIQ1Q96JM4 1722 aa29.11■■■□□ 2.25
CPSF4-205ENST00000440514 ATP1B4Q9UN42 357 aaPredicted RBP29.09■■■□□ 2.25
CPSF4-205ENST00000440514 KCNH8Q96L42 1107 aa29.08■■■□□ 2.25
CPSF4-205ENST00000440514 CASKIN1Q8WXD9 1431 aa29.07■■■□□ 2.24
CPSF4-205ENST00000440514 CFAP43Q8NDM7 1665 aa29.06■■■□□ 2.24
CPSF4-205ENST00000440514 FYCO1Q9BQS8 1478 aa29.04■■■□□ 2.24
CPSF4-205ENST00000440514 ABCA9Q8IUA7 1624 aa29.01■■■□□ 2.23
CPSF4-205ENST00000440514 CD109Q6YHK3 1445 aa28.96■■■□□ 2.23
CPSF4-205ENST00000440514 PLEKHD1A6NEE1 506 aa28.96■■■□□ 2.23
CPSF4-205ENST00000440514 CCDC18Q5T9S5 1454 aa28.96■■■□□ 2.23
CPSF4-205ENST00000440514 KDM6BO15054 1643 aa28.94■■■□□ 2.22
CPSF4-205ENST00000440514 TEX14Q8IWB6 1497 aa28.93■■■□□ 2.22
CPSF4-205ENST00000440514 MAGI3Q5TCQ9 1506 aa28.92■■■□□ 2.22
CPSF4-205ENST00000440514 TTC37Q6PGP7 1564 aa28.91■■■□□ 2.22
CPSF4-205ENST00000440514 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.89■■■□□ 2.22
CPSF4-205ENST00000440514 KIF14Q15058 1648 aa28.87■■■□□ 2.21
CPSF4-205ENST00000440514 TROQ12816 1431 aaPredicted RBP28.86■■■□□ 2.21
CPSF4-205ENST00000440514 CDK11AQ9UQ88 783 aaPredicted RBP28.84■■■□□ 2.21
CPSF4-205ENST00000440514 VPS8Q8N3P4 1428 aa28.82■■■□□ 2.2
CPSF4-205ENST00000440514 COL17A1Q9UMD9 1497 aaPredicted RBP28.78■■■□□ 2.2
CPSF4-205ENST00000440514 MYO5CQ9NQX4 1742 aa28.74■■■□□ 2.19
CPSF4-205ENST00000440514 NEO1Q92859 1461 aa28.71■■■□□ 2.19
CPSF4-205ENST00000440514 CFAP74Q9C0B2 1584 aa28.7■■■□□ 2.18
CPSF4-205ENST00000440514 TIAM1Q13009 1591 aa28.68■■■□□ 2.18
CPSF4-205ENST00000440514 FANCAO15360 1455 aa28.68■■■□□ 2.18
CPSF4-205ENST00000440514 EHBP1L1Q8N3D4 1523 aa28.66■■■□□ 2.18
CPSF4-205ENST00000440514 ARAP3Q8WWN8 1544 aa28.66■■■□□ 2.18
CPSF4-205ENST00000440514 PLCH2O75038 1416 aa28.66■■■□□ 2.18
CPSF4-205ENST00000440514 MTUS2Q5JR59 1369 aa28.64■■■□□ 2.18
CPSF4-205ENST00000440514 PREX2Q70Z35 1606 aa28.64■■■□□ 2.18
CPSF4-205ENST00000440514 PHLDB1Q86UU1 1377 aa28.62■■■□□ 2.17
CPSF4-205ENST00000440514 AKNAQ7Z591 1439 aa28.6■■■□□ 2.17
CPSF4-205ENST00000440514 CDC42BPAQ5VT25 1732 aa28.6■■■□□ 2.17
CPSF4-205ENST00000440514 CDC42BPBQ9Y5S2 1711 aa28.6■■■□□ 2.17
CPSF4-205ENST00000440514 ARHGAP5Q13017 1502 aa28.6■■■□□ 2.17
CPSF4-205ENST00000440514 FRMPD1Q5SYB0 1578 aa28.59■■■□□ 2.17
CPSF4-205ENST00000440514 ADGRL1O94910 1474 aa28.54■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms