RNA–Protein interactions for RNA: ENST00000440472.6

SPIRE1-204, Transcript of spire type actin nucleation factor 1, humanhuman

TSL 1 (best)

Gene SPIRE1, Length 2,109 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-204ENST00000440472 TARBP1Q13395 1621 aaKnown RBP12.34□□□□□ -0.43
SPIRE1-204ENST00000440472 CFAP43Q8NDM7 1665 aa12.34□□□□□ -0.43
SPIRE1-204ENST00000440472 TTBK1Q5TCY1 1321 aaPredicted RBP12.33□□□□□ -0.44
SPIRE1-204ENST00000440472 GAPVD1Q14C86 1478 aa12.33□□□□□ -0.44
SPIRE1-204ENST00000440472 KANK4Q5T7N3 995 aaPredicted RBP12.32□□□□□ -0.44
SPIRE1-204ENST00000440472 FYCO1Q9BQS8 1478 aa12.32□□□□□ -0.44
SPIRE1-204ENST00000440472 CASKIN1Q8WXD9 1431 aa12.3□□□□□ -0.44
SPIRE1-204ENST00000440472 LRRC9Q6ZRR7 1453 aa12.3□□□□□ -0.44
SPIRE1-204ENST00000440472 SAMD9Q5K651 1589 aa12.3□□□□□ -0.44
SPIRE1-204ENST00000440472 MRC2Q9UBG0 1479 aa12.3□□□□□ -0.44
SPIRE1-204ENST00000440472 CCNB3Q8WWL7 1395 aa12.29□□□□□ -0.44
SPIRE1-204ENST00000440472 RANGAP1P46060 587 aaPredicted RBP12.29□□□□□ -0.44
SPIRE1-204ENST00000440472 FMN1Q68DA7 1419 aa12.28□□□□□ -0.44
SPIRE1-204ENST00000440472 PCF11O94913 1555 aaKnown RBP12.27□□□□□ -0.45
SPIRE1-204ENST00000440472 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.27□□□□□ -0.45
SPIRE1-204ENST00000440472 THOC2Q8NI27 1593 aaKnown RBP12.26□□□□□ -0.45
SPIRE1-204ENST00000440472 HNRNPUL2Q1KMD3 747 aaKnown RBP12.26□□□□□ -0.45
SPIRE1-204ENST00000440472 ILDR1Q86SU0 546 aaPredicted RBP12.26□□□□□ -0.45
SPIRE1-204ENST00000440472 WDR62O43379 1518 aa12.24□□□□□ -0.45
SPIRE1-204ENST00000440472 TDRD9Q8NDG6 1382 aaKnown RBP12.24□□□□□ -0.45
SPIRE1-204ENST00000440472 PBRM1Q86U86 1689 aa12.24□□□□□ -0.45
SPIRE1-204ENST00000440472 SNAPC4Q5SXM2 1469 aa12.22□□□□□ -0.45
SPIRE1-204ENST00000440472 IFT140Q96RY7 1462 aa12.22□□□□□ -0.45
SPIRE1-204ENST00000440472 FHOD3Q2V2M9 1422 aa12.21□□□□□ -0.45
SPIRE1-204ENST00000440472 DHX57Q6P158 1386 aaKnown RBP12.21□□□□□ -0.45
SPIRE1-204ENST00000440472 ADAMTS12P58397 1594 aa12.21□□□□□ -0.45
SPIRE1-204ENST00000440472 GRIN2BQ13224 1484 aa12.2□□□□□ -0.46
SPIRE1-204ENST00000440472 PHLDB1Q86UU1 1377 aa12.17□□□□□ -0.46
SPIRE1-204ENST00000440472 ZNF316A6NFI3 1004 aaPredicted RBP12.16□□□□□ -0.46
SPIRE1-204ENST00000440472 UGGT2Q9NYU1 1516 aa12.15□□□□□ -0.46
SPIRE1-204ENST00000440472 IQGAP2Q13576 1575 aa12.15□□□□□ -0.46
SPIRE1-204ENST00000440472 CCDC18Q5T9S5 1454 aa12.14□□□□□ -0.47
SPIRE1-204ENST00000440472 SETD5Q9C0A6 1442 aa12.12□□□□□ -0.47
SPIRE1-204ENST00000440472 EHBP1L1Q8N3D4 1523 aa12.12□□□□□ -0.47
SPIRE1-204ENST00000440472 ARHGEF11O15085 1522 aa12.11□□□□□ -0.47
SPIRE1-204ENST00000440472 DIEXFQ68CQ4 756 aaKnown RBP12.11□□□□□ -0.47
SPIRE1-204ENST00000440472 LRRIQ1Q96JM4 1722 aa12.1□□□□□ -0.47
SPIRE1-204ENST00000440472 KIAA0586Q9BVV6 1533 aa12.09□□□□□ -0.47
SPIRE1-204ENST00000440472 HECW1Q76N89 1606 aa12.09□□□□□ -0.47
SPIRE1-204ENST00000440472 P3H3Q8IVL6 736 aa12.09□□□□□ -0.47
SPIRE1-204ENST00000440472 RAB3GAP2Q9H2M9 1393 aa12.09□□□□□ -0.47
SPIRE1-204ENST00000440472 FGD6Q6ZV73 1430 aa12.09□□□□□ -0.47
SPIRE1-204ENST00000440472 SUPT6HQ7KZ85 1726 aaKnown RBP12.08□□□□□ -0.47
SPIRE1-204ENST00000440472 MAGI1Q96QZ7 1491 aaPredicted RBP12.08□□□□□ -0.48
SPIRE1-204ENST00000440472 MTUS2Q5JR59 1369 aa12.06□□□□□ -0.48
SPIRE1-204ENST00000440472 ZNF608Q9ULD9 1512 aaPredicted RBP12.06□□□□□ -0.48
SPIRE1-204ENST00000440472 EIF4G3O43432 1585 aaKnown RBP12.06□□□□□ -0.48
SPIRE1-204ENST00000440472 MYOM3Q5VTT5 1437 aa12.05□□□□□ -0.48
SPIRE1-204ENST00000440472 MAPKBP1O60336 1514 aa12.05□□□□□ -0.48
SPIRE1-204ENST00000440472 NCOA2Q15596 1464 aa12.05□□□□□ -0.48
SPIRE1-204ENST00000440472 TIMELESSQ9UNS1 1208 aa12.05□□□□□ -0.48
SPIRE1-204ENST00000440472 GRIN2AQ12879 1464 aa12.04□□□□□ -0.48
SPIRE1-204ENST00000440472 TCOF1Q13428 1488 aaKnown RBP12.04□□□□□ -0.48
SPIRE1-204ENST00000440472 EPRSP07814 1512 aaKnown RBP12.02□□□□□ -0.48
SPIRE1-204ENST00000440472 KIAA0556O60303 1618 aa12.02□□□□□ -0.48
SPIRE1-204ENST00000440472 ERCC6Q03468 1493 aa12.02□□□□□ -0.49
SPIRE1-204ENST00000440472 DISP1Q96F81 1524 aa12.01□□□□□ -0.49
SPIRE1-204ENST00000440472 HFM1A2PYH4 1435 aa12.01□□□□□ -0.49
SPIRE1-204ENST00000440472 AKNAQ7Z591 1439 aa12.01□□□□□ -0.49
SPIRE1-204ENST00000440472 MIA2Q96PC5 1412 aa12.01□□□□□ -0.49
SPIRE1-204ENST00000440472 SYNJ2O15056 1496 aa12.01□□□□□ -0.49
SPIRE1-204ENST00000440472 MAGI3Q5TCQ9 1506 aa11.99□□□□□ -0.49
SPIRE1-204ENST00000440472 FAM50AQ14320 339 aaKnown RBP11.99□□□□□ -0.49
SPIRE1-204ENST00000440472 ACIN1Q9UKV3 1341 aaKnown RBP11.99□□□□□ -0.49
SPIRE1-204ENST00000440472 PTPN23Q9H3S7 1636 aa11.99□□□□□ -0.49
SPIRE1-204ENST00000440472 ATP1B4Q9UN42 357 aaPredicted RBP11.99□□□□□ -0.49
SPIRE1-204ENST00000440472 NUP160Q12769 1436 aa11.98□□□□□ -0.49
SPIRE1-204ENST00000440472 RAPGEF6Q8TEU7 1601 aa11.95□□□□□ -0.5
SPIRE1-204ENST00000440472 UACAQ9BZF9 1416 aa11.95□□□□□ -0.5
SPIRE1-204ENST00000440472 ITGAEP38570 1179 aa11.95□□□□□ -0.5
SPIRE1-204ENST00000440472 NAIPQ13075 1403 aa11.94□□□□□ -0.5
SPIRE1-204ENST00000440472 PTPRKQ15262 1439 aa11.94□□□□□ -0.5
SPIRE1-204ENST00000440472 CEP170Q5SW79 1584 aa11.94□□□□□ -0.5
SPIRE1-204ENST00000440472 GCC2Q8IWJ2 1684 aa11.93□□□□□ -0.5
SPIRE1-204ENST00000440472 NUP153P49790 1475 aaKnown RBP11.92□□□□□ -0.5
SPIRE1-204ENST00000440472 CENPBP07199 599 aaPredicted RBP11.92□□□□□ -0.5
SPIRE1-204ENST00000440472 CDK13Q14004 1512 aaKnown RBP11.91□□□□□ -0.5
SPIRE1-204ENST00000440472 CARMIL2Q6F5E8 1435 aa11.9□□□□□ -0.5
SPIRE1-204ENST00000440472 ADCY10Q96PN6 1610 aa11.9□□□□□ -0.51
SPIRE1-204ENST00000440472 ROCK1Q13464 1354 aa11.9□□□□□ -0.51
SPIRE1-204ENST00000440472 CDK11AQ9UQ88 783 aaPredicted RBP11.89□□□□□ -0.51
SPIRE1-204ENST00000440472 CHMP7Q8WUX9 453 aaPredicted RBP11.87□□□□□ -0.51
SPIRE1-204ENST00000440472 TROQ12816 1431 aaPredicted RBP11.87□□□□□ -0.51
SPIRE1-204ENST00000440472 DNMT1P26358 1616 aaKnown RBP11.85□□□□□ -0.51
SPIRE1-204ENST00000440472 ABCA8O94911 1581 aa11.85□□□□□ -0.51
SPIRE1-204ENST00000440472 ITSN2Q9NZM3 1697 aa11.84□□□□□ -0.51
SPIRE1-204ENST00000440472 MIER1Q8N108 512 aa11.84□□□□□ -0.51
SPIRE1-204ENST00000440472 PPP1R15AO75807 674 aaPredicted RBP11.83□□□□□ -0.52
SPIRE1-204ENST00000440472 JPH4Q96JJ6 628 aa11.83□□□□□ -0.52
SPIRE1-204ENST00000440472 SCAF1Q9H7N4 1312 aaKnown RBP11.82□□□□□ -0.52
SPIRE1-204ENST00000440472 DAPK1P53355 1430 aa11.82□□□□□ -0.52
SPIRE1-204ENST00000440472 NEUROD1Q13562 356 aa11.8□□□□□ -0.52
SPIRE1-204ENST00000440472 ABCC5O15440 1437 aa11.8□□□□□ -0.52
SPIRE1-204ENST00000440472 ADGRL2O95490 1459 aa11.79□□□□□ -0.52
SPIRE1-204ENST00000440472 SIN3AQ96ST3 1273 aa11.79□□□□□ -0.52
SPIRE1-204ENST00000440472 PLB1Q6P1J6 1458 aa11.79□□□□□ -0.52
SPIRE1-204ENST00000440472 GPATCH8Q9UKJ3 1502 aaKnown RBP11.78□□□□□ -0.52
SPIRE1-204ENST00000440472 SHROOM2Q13796 1616 aa11.77□□□□□ -0.52
SPIRE1-204ENST00000440472 DENND4BO75064 1496 aaPredicted RBP11.77□□□□□ -0.52
SPIRE1-204ENST00000440472 ADGBQ8N7X0 1667 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms