RNA–Protein interactions for RNA: ENST00000440421.2

LTBR-202, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 729 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-202ENST00000440421 JPH4Q96JJ6 628 aa23.35■■□□□ 1.33
LTBR-202ENST00000440421 PRG4Q92954 1404 aaPredicted RBP23.33■■□□□ 1.33
LTBR-202ENST00000440421 KIAA0586Q9BVV6 1533 aa23.3■■□□□ 1.32
LTBR-202ENST00000440421 RAPGEF2Q9Y4G8 1499 aa23.24■■□□□ 1.31
LTBR-202ENST00000440421 TRHP20396 242 aaPredicted RBP23.21■■□□□ 1.31
LTBR-202ENST00000440421 IQGAP2Q13576 1575 aa23.16■■□□□ 1.3
LTBR-202ENST00000440421 PRXQ9BXM0 1461 aa23.1■■□□□ 1.29
LTBR-202ENST00000440421 TTBK1Q5TCY1 1321 aaPredicted RBP23.08■■□□□ 1.29
LTBR-202ENST00000440421 CARMIL2Q6F5E8 1435 aa23.08■■□□□ 1.28
LTBR-202ENST00000440421 CSRNP3Q8WYN3 585 aa23.06■■□□□ 1.28
LTBR-202ENST00000440421 CTTNBP2Q8WZ74 1663 aa23.04■■□□□ 1.28
LTBR-202ENST00000440421 CHIC1Q5VXU3 224 aa23.04■■□□□ 1.28
LTBR-202ENST00000440421 FAM9AQ8IZU1 332 aaPredicted RBP23.03■■□□□ 1.28
LTBR-202ENST00000440421 PTPRGP23470 1445 aa23.02■■□□□ 1.28
LTBR-202ENST00000440421 UGGT2Q9NYU1 1516 aa23.02■■□□□ 1.28
LTBR-202ENST00000440421 DISP1Q96F81 1524 aa23.01■■□□□ 1.27
LTBR-202ENST00000440421 TNIKQ9UKE5 1360 aa23.01■■□□□ 1.27
LTBR-202ENST00000440421 EEA1Q15075 1411 aa23■■□□□ 1.27
LTBR-202ENST00000440421 ADCY10Q96PN6 1610 aa23■■□□□ 1.27
LTBR-202ENST00000440421 NPM1P06748 294 aaKnown RBP eCLIP22.97■■□□□ 1.27
LTBR-202ENST00000440421 KIAA0556O60303 1618 aa22.95■■□□□ 1.26
LTBR-202ENST00000440421 GOLGA3Q08378 1498 aa22.87■■□□□ 1.25
LTBR-202ENST00000440421 MAPKBP1O60336 1514 aa22.86■■□□□ 1.25
LTBR-202ENST00000440421 UACAQ9BZF9 1416 aa22.85■■□□□ 1.25
LTBR-202ENST00000440421 ABCC2Q92887 1545 aa22.83■■□□□ 1.25
LTBR-202ENST00000440421 KIF13AQ9H1H9 1805 aa22.83■■□□□ 1.25
LTBR-202ENST00000440421 UHRF1BP1LA0JNW5 1464 aa22.82■■□□□ 1.24
LTBR-202ENST00000440421 KIF21BO75037 1637 aa22.81■■□□□ 1.24
LTBR-202ENST00000440421 ABCC10Q5T3U5 1492 aa22.79■■□□□ 1.24
LTBR-202ENST00000440421 FAM69CQ0P6D2 419 aa22.79■■□□□ 1.24
LTBR-202ENST00000440421 P3H3Q8IVL6 736 aa22.79■■□□□ 1.24
LTBR-202ENST00000440421 EHMT2Q96KQ7 1210 aa22.79■■□□□ 1.24
LTBR-202ENST00000440421 RANGAP1P46060 587 aaPredicted RBP22.78■■□□□ 1.24
LTBR-202ENST00000440421 PLB1Q6P1J6 1458 aa22.76■■□□□ 1.23
LTBR-202ENST00000440421 DIP2BQ9P265 1576 aa22.76■■□□□ 1.23
LTBR-202ENST00000440421 ASXL2Q76L83 1435 aa22.73■■□□□ 1.23
LTBR-202ENST00000440421 KDM5BQ9UGL1 1544 aa22.72■■□□□ 1.23
LTBR-202ENST00000440421 SAMD9Q5K651 1589 aa22.72■■□□□ 1.23
LTBR-202ENST00000440421 ZCCHC11Q5TAX3 1644 aaKnown RBP22.71■■□□□ 1.23
LTBR-202ENST00000440421 ABCA8O94911 1581 aa22.7■■□□□ 1.22
LTBR-202ENST00000440421 UBTFP17480 764 aaKnown RBP22.68■■□□□ 1.22
LTBR-202ENST00000440421 TSPOAP1O95153 1857 aa22.62■■□□□ 1.21
LTBR-202ENST00000440421 FHOD3Q2V2M9 1422 aa22.62■■□□□ 1.21
LTBR-202ENST00000440421 ARID3CA6NKF2 412 aa22.61■■□□□ 1.21
LTBR-202ENST00000440421 GLI2P10070 1586 aa22.58■■□□□ 1.2
LTBR-202ENST00000440421 EFCAB5A4FU69 1503 aa22.57■■□□□ 1.2
LTBR-202ENST00000440421 EPRSP07814 1512 aaKnown RBP22.57■■□□□ 1.2
LTBR-202ENST00000440421 WDR7Q9Y4E6 1490 aa22.56■■□□□ 1.2
LTBR-202ENST00000440421 RAPGEF6Q8TEU7 1601 aa22.56■■□□□ 1.2
LTBR-202ENST00000440421 ATP10BO94823 1461 aa22.53■■□□□ 1.2
LTBR-202ENST00000440421 KCNH8Q96L42 1107 aa22.51■■□□□ 1.19
LTBR-202ENST00000440421 MAP3K4Q9Y6R4 1608 aa22.49■■□□□ 1.19
LTBR-202ENST00000440421 PPRC1Q5VV67 1664 aaKnown RBP22.49■■□□□ 1.19
LTBR-202ENST00000440421 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.48■■□□□ 1.19
LTBR-202ENST00000440421 HNRNPUL2Q1KMD3 747 aaKnown RBP22.48■■□□□ 1.19
LTBR-202ENST00000440421 NUP153P49790 1475 aaKnown RBP22.47■■□□□ 1.19
LTBR-202ENST00000440421 KDM6BO15054 1643 aa22.46■■□□□ 1.19
LTBR-202ENST00000440421 ARHGAP35Q9NRY4 1499 aa22.46■■□□□ 1.19
LTBR-202ENST00000440421 TEX14Q8IWB6 1497 aa22.39■■□□□ 1.17
LTBR-202ENST00000440421 CFAP43Q8NDM7 1665 aa22.39■■□□□ 1.17
LTBR-202ENST00000440421 CD109Q6YHK3 1445 aa22.39■■□□□ 1.17
LTBR-202ENST00000440421 FMN1Q68DA7 1419 aa22.38■■□□□ 1.17
LTBR-202ENST00000440421 ATP1B4Q9UN42 357 aaPredicted RBP22.37■■□□□ 1.17
LTBR-202ENST00000440421 CDK13Q14004 1512 aaKnown RBP22.32■■□□□ 1.16
LTBR-202ENST00000440421 MAGI3Q5TCQ9 1506 aa22.32■■□□□ 1.16
LTBR-202ENST00000440421 PLEKHD1A6NEE1 506 aa22.32■■□□□ 1.16
LTBR-202ENST00000440421 HECW1Q76N89 1606 aa22.31■■□□□ 1.16
LTBR-202ENST00000440421 COL17A1Q9UMD9 1497 aaPredicted RBP22.3■■□□□ 1.16
LTBR-202ENST00000440421 ABCA9Q8IUA7 1624 aa22.3■■□□□ 1.16
LTBR-202ENST00000440421 CLIP1P30622 1438 aa22.27■■□□□ 1.16
LTBR-202ENST00000440421 PCF11O94913 1555 aaKnown RBP22.21■■□□□ 1.15
LTBR-202ENST00000440421 LRRIQ1Q96JM4 1722 aa22.2■■□□□ 1.14
LTBR-202ENST00000440421 CASKIN1Q8WXD9 1431 aa22.19■■□□□ 1.14
LTBR-202ENST00000440421 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.19■■□□□ 1.14
LTBR-202ENST00000440421 TTC37Q6PGP7 1564 aa22.17■■□□□ 1.14
LTBR-202ENST00000440421 AEBP2Q6ZN18 517 aaPredicted RBP22.17■■□□□ 1.14
LTBR-202ENST00000440421 CDK11AQ9UQ88 783 aaPredicted RBP22.17■■□□□ 1.14
LTBR-202ENST00000440421 LOC105371045A0A1W2PR82 267 aa22.15■■□□□ 1.14
LTBR-202ENST00000440421 ARAP3Q8WWN8 1544 aa22.14■■□□□ 1.13
LTBR-202ENST00000440421 NEO1Q92859 1461 aa22.13■■□□□ 1.13
LTBR-202ENST00000440421 CEP162Q5TB80 1403 aa22.13■■□□□ 1.13
LTBR-202ENST00000440421 FYCO1Q9BQS8 1478 aa22.12■■□□□ 1.13
LTBR-202ENST00000440421 PHLDB1Q86UU1 1377 aa22.12■■□□□ 1.13
LTBR-202ENST00000440421 CCDC18Q5T9S5 1454 aa22.11■■□□□ 1.13
LTBR-202ENST00000440421 TROQ12816 1431 aaPredicted RBP22.11■■□□□ 1.13
LTBR-202ENST00000440421 KIF14Q15058 1648 aa22.09■■□□□ 1.13
LTBR-202ENST00000440421 FANCAO15360 1455 aa22.09■■□□□ 1.13
LTBR-202ENST00000440421 RAPGEF3O95398 923 aa22.07■■□□□ 1.12
LTBR-202ENST00000440421 CFAP74Q9C0B2 1584 aa22.05■■□□□ 1.12
LTBR-202ENST00000440421 PLCH2O75038 1416 aa22.05■■□□□ 1.12
LTBR-202ENST00000440421 AKNAQ7Z591 1439 aa22.05■■□□□ 1.12
LTBR-202ENST00000440421 KDM4FA0A1W2PPD8 638 aa22.04■■□□□ 1.12
LTBR-202ENST00000440421 MYO5CQ9NQX4 1742 aa22.03■■□□□ 1.12
LTBR-202ENST00000440421 FRMPD1Q5SYB0 1578 aa22.01■■□□□ 1.11
LTBR-202ENST00000440421 DENND4BO75064 1496 aaPredicted RBP22■■□□□ 1.11
LTBR-202ENST00000440421 ADGRL1O94910 1474 aa21.98■■□□□ 1.11
LTBR-202ENST00000440421 EFCAB2Q5VUJ9 269 aa21.97■■□□□ 1.11
LTBR-202ENST00000440421 ARHGAP5Q13017 1502 aa21.96■■□□□ 1.11
LTBR-202ENST00000440421 RICTORQ6R327 1708 aa21.96■■□□□ 1.11
LTBR-202ENST00000440421 SCAPERQ9BY12 1400 aa21.94■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms