RNA–Protein interactions for RNA: ENST00000440313.2

LRTOMT-209, Transcript of leucine rich transmembrane and O-methyltransferase domain containing, humanhuman

TSL 3 BASIC

Gene LRTOMT, Length 253 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTOMT-209ENST00000440313 SHROOM2Q13796 1616 aa11.6□□□□□ -0.55
LRTOMT-209ENST00000440313 ERCC6L2Q5T890 1561 aa11.59□□□□□ -0.55
LRTOMT-209ENST00000440313 CUL7Q14999 1698 aa11.59□□□□□ -0.55
LRTOMT-209ENST00000440313 KIAA0586Q9BVV6 1533 aa11.57□□□□□ -0.56
LRTOMT-209ENST00000440313 NPM1P06748 294 aaKnown RBP eCLIP11.55□□□□□ -0.56
LRTOMT-209ENST00000440313 RUSC2Q8N2Y8 1516 aa11.54□□□□□ -0.56
LRTOMT-209ENST00000440313 RAPGEF2Q9Y4G8 1499 aa11.5□□□□□ -0.57
LRTOMT-209ENST00000440313 CARMIL2Q6F5E8 1435 aa11.49□□□□□ -0.57
LRTOMT-209ENST00000440313 PTPRGP23470 1445 aa11.48□□□□□ -0.57
LRTOMT-209ENST00000440313 TTBK1Q5TCY1 1321 aaPredicted RBP11.46□□□□□ -0.57
LRTOMT-209ENST00000440313 TNIKQ9UKE5 1360 aa11.45□□□□□ -0.58
LRTOMT-209ENST00000440313 IQGAP2Q13576 1575 aa11.45□□□□□ -0.58
LRTOMT-209ENST00000440313 FAM69CQ0P6D2 419 aa11.43□□□□□ -0.58
LRTOMT-209ENST00000440313 CSRNP3Q8WYN3 585 aa11.41□□□□□ -0.58
LRTOMT-209ENST00000440313 ADCY10Q96PN6 1610 aa11.4□□□□□ -0.58
LRTOMT-209ENST00000440313 FAM9AQ8IZU1 332 aaPredicted RBP11.4□□□□□ -0.58
LRTOMT-209ENST00000440313 MAPKBP1O60336 1514 aa11.39□□□□□ -0.59
LRTOMT-209ENST00000440313 UGGT2Q9NYU1 1516 aa11.39□□□□□ -0.59
LRTOMT-209ENST00000440313 ABCC10Q5T3U5 1492 aa11.38□□□□□ -0.59
LRTOMT-209ENST00000440313 PRXQ9BXM0 1461 aa11.38□□□□□ -0.59
LRTOMT-209ENST00000440313 DISP1Q96F81 1524 aa11.38□□□□□ -0.59
LRTOMT-209ENST00000440313 UACAQ9BZF9 1416 aa11.37□□□□□ -0.59
LRTOMT-209ENST00000440313 ILDR1Q86SU0 546 aaPredicted RBP11.37□□□□□ -0.59
LRTOMT-209ENST00000440313 ABCC2Q92887 1545 aa11.35□□□□□ -0.59
LRTOMT-209ENST00000440313 UHRF1BP1LA0JNW5 1464 aa11.35□□□□□ -0.59
LRTOMT-209ENST00000440313 GOLGA3Q08378 1498 aa11.35□□□□□ -0.59
LRTOMT-209ENST00000440313 KIF13AQ9H1H9 1805 aa11.35□□□□□ -0.59
LRTOMT-209ENST00000440313 EEA1Q15075 1411 aa11.35□□□□□ -0.59
LRTOMT-209ENST00000440313 PLB1Q6P1J6 1458 aa11.32□□□□□ -0.6
LRTOMT-209ENST00000440313 CTTNBP2Q8WZ74 1663 aa11.32□□□□□ -0.6
LRTOMT-209ENST00000440313 KIAA0556O60303 1618 aa11.31□□□□□ -0.6
LRTOMT-209ENST00000440313 ASXL2Q76L83 1435 aa11.31□□□□□ -0.6
LRTOMT-209ENST00000440313 DIP2BQ9P265 1576 aa11.3□□□□□ -0.6
LRTOMT-209ENST00000440313 KDM5BQ9UGL1 1544 aa11.29□□□□□ -0.6
LRTOMT-209ENST00000440313 CHIC1Q5VXU3 224 aa11.28□□□□□ -0.6
LRTOMT-209ENST00000440313 P3H3Q8IVL6 736 aa11.28□□□□□ -0.6
LRTOMT-209ENST00000440313 RANGAP1P46060 587 aaPredicted RBP11.25□□□□□ -0.61
LRTOMT-209ENST00000440313 TSPOAP1O95153 1857 aa11.25□□□□□ -0.61
LRTOMT-209ENST00000440313 GLI2P10070 1586 aa11.24□□□□□ -0.61
LRTOMT-209ENST00000440313 KCNH8Q96L42 1107 aa11.24□□□□□ -0.61
LRTOMT-209ENST00000440313 KDM4FA0A1W2PPD8 638 aa11.23□□□□□ -0.61
LRTOMT-209ENST00000440313 EPRSP07814 1512 aaKnown RBP11.23□□□□□ -0.61
LRTOMT-209ENST00000440313 ZCCHC11Q5TAX3 1644 aaKnown RBP11.23□□□□□ -0.61
LRTOMT-209ENST00000440313 ABCA8O94911 1581 aa11.22□□□□□ -0.61
LRTOMT-209ENST00000440313 UBTFP17480 764 aaKnown RBP11.22□□□□□ -0.61
LRTOMT-209ENST00000440313 WDR7Q9Y4E6 1490 aa11.21□□□□□ -0.61
LRTOMT-209ENST00000440313 ARID3CA6NKF2 412 aa11.2□□□□□ -0.62
LRTOMT-209ENST00000440313 KDM6BO15054 1643 aa11.2□□□□□ -0.62
LRTOMT-209ENST00000440313 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.19□□□□□ -0.62
LRTOMT-209ENST00000440313 HNRNPUL2Q1KMD3 747 aaKnown RBP11.19□□□□□ -0.62
LRTOMT-209ENST00000440313 TEX14Q8IWB6 1497 aa11.19□□□□□ -0.62
LRTOMT-209ENST00000440313 EHMT2Q96KQ7 1210 aa11.18□□□□□ -0.62
LRTOMT-209ENST00000440313 KIF21BO75037 1637 aa11.17□□□□□ -0.62
LRTOMT-209ENST00000440313 SAMD9Q5K651 1589 aa11.17□□□□□ -0.62
LRTOMT-209ENST00000440313 CD109Q6YHK3 1445 aa11.17□□□□□ -0.62
LRTOMT-209ENST00000440313 ATP10BO94823 1461 aa11.16□□□□□ -0.62
LRTOMT-209ENST00000440313 MAP3K4Q9Y6R4 1608 aa11.16□□□□□ -0.62
LRTOMT-209ENST00000440313 PLEKHD1A6NEE1 506 aa11.14□□□□□ -0.63
LRTOMT-209ENST00000440313 FHOD3Q2V2M9 1422 aa11.14□□□□□ -0.63
LRTOMT-209ENST00000440313 PPRC1Q5VV67 1664 aaKnown RBP11.14□□□□□ -0.63
LRTOMT-209ENST00000440313 RAPGEF6Q8TEU7 1601 aa11.13□□□□□ -0.63
LRTOMT-209ENST00000440313 EFCAB5A4FU69 1503 aa11.12□□□□□ -0.63
LRTOMT-209ENST00000440313 MAGI3Q5TCQ9 1506 aa11.12□□□□□ -0.63
LRTOMT-209ENST00000440313 CFAP43Q8NDM7 1665 aa11.11□□□□□ -0.63
LRTOMT-209ENST00000440313 COL17A1Q9UMD9 1497 aaPredicted RBP11.1□□□□□ -0.63
LRTOMT-209ENST00000440313 NUP153P49790 1475 aaKnown RBP11.09□□□□□ -0.63
LRTOMT-209ENST00000440313 PHLDB1Q86UU1 1377 aa11.09□□□□□ -0.63
LRTOMT-209ENST00000440313 ATP1B4Q9UN42 357 aaPredicted RBP11.09□□□□□ -0.63
LRTOMT-209ENST00000440313 CDK11AQ9UQ88 783 aaPredicted RBP11.07□□□□□ -0.64
LRTOMT-209ENST00000440313 FMN1Q68DA7 1419 aa11.07□□□□□ -0.64
LRTOMT-209ENST00000440313 ABCA9Q8IUA7 1624 aa11.04□□□□□ -0.64
LRTOMT-209ENST00000440313 ARAP3Q8WWN8 1544 aa11.04□□□□□ -0.64
LRTOMT-209ENST00000440313 ARHGAP35Q9NRY4 1499 aa11.03□□□□□ -0.64
LRTOMT-209ENST00000440313 NEO1Q92859 1461 aa11.02□□□□□ -0.65
LRTOMT-209ENST00000440313 RAPGEF3O95398 923 aa11.01□□□□□ -0.65
LRTOMT-209ENST00000440313 ADGRL1O94910 1474 aa10.99□□□□□ -0.65
LRTOMT-209ENST00000440313 CDK13Q14004 1512 aaKnown RBP10.99□□□□□ -0.65
LRTOMT-209ENST00000440313 HECW1Q76N89 1606 aa10.98□□□□□ -0.65
LRTOMT-209ENST00000440313 AKNAQ7Z591 1439 aa10.97□□□□□ -0.65
LRTOMT-209ENST00000440313 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.96□□□□□ -0.65
LRTOMT-209ENST00000440313 FANCAO15360 1455 aa10.96□□□□□ -0.65
LRTOMT-209ENST00000440313 EFCAB2Q5VUJ9 269 aa10.96□□□□□ -0.65
LRTOMT-209ENST00000440313 DENND4BO75064 1496 aaPredicted RBP10.95□□□□□ -0.66
LRTOMT-209ENST00000440313 PLCH2O75038 1416 aa10.95□□□□□ -0.66
LRTOMT-209ENST00000440313 CLIP1P30622 1438 aa10.95□□□□□ -0.66
LRTOMT-209ENST00000440313 CASKIN1Q8WXD9 1431 aa10.94□□□□□ -0.66
LRTOMT-209ENST00000440313 ARID4BQ4LE39 1312 aaPredicted RBP10.94□□□□□ -0.66
LRTOMT-209ENST00000440313 TROQ12816 1431 aaPredicted RBP10.93□□□□□ -0.66
LRTOMT-209ENST00000440313 FBXO41Q8TF61 875 aa10.93□□□□□ -0.66
LRTOMT-209ENST00000440313 CFAP74Q9C0B2 1584 aa10.93□□□□□ -0.66
LRTOMT-209ENST00000440313 TTC37Q6PGP7 1564 aa10.92□□□□□ -0.66
LRTOMT-209ENST00000440313 CCDC18Q5T9S5 1454 aa10.92□□□□□ -0.66
LRTOMT-209ENST00000440313 SCAPERQ9BY12 1400 aa10.91□□□□□ -0.66
LRTOMT-209ENST00000440313 FYCO1Q9BQS8 1478 aa10.89□□□□□ -0.67
LRTOMT-209ENST00000440313 KIF14Q15058 1648 aa10.89□□□□□ -0.67
LRTOMT-209ENST00000440313 MAGI2Q86UL8 1455 aa10.88□□□□□ -0.67
LRTOMT-209ENST00000440313 FRMPD1Q5SYB0 1578 aa10.87□□□□□ -0.67
LRTOMT-209ENST00000440313 HECW2Q9P2P5 1572 aa10.87□□□□□ -0.67
LRTOMT-209ENST00000440313 MYT1LQ9UL68 1186 aa10.87□□□□□ -0.67
LRTOMT-209ENST00000440313 RICTORQ6R327 1708 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms