RNA–Protein interactions for RNA: ENST00000440240.5

CPNE1-219, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-219ENST00000440240 RUSC2Q8N2Y8 1516 aa36.06■■■■□ 3.36
CPNE1-219ENST00000440240 KIAA0586Q9BVV6 1533 aa36.02■■■■□ 3.36
CPNE1-219ENST00000440240 CUL7Q14999 1698 aa36■■■■□ 3.35
CPNE1-219ENST00000440240 NPM1P06748 294 aaKnown RBP eCLIP35.95■■■■□ 3.35
CPNE1-219ENST00000440240 CARMIL1Q5VZK9 1371 aa35.93■■■■□ 3.34
CPNE1-219ENST00000440240 FAM69CQ0P6D2 419 aa35.75■■■■□ 3.31
CPNE1-219ENST00000440240 PTPRGP23470 1445 aa35.72■■■■□ 3.31
CPNE1-219ENST00000440240 KIF13AQ9H1H9 1805 aa35.71■■■■□ 3.31
CPNE1-219ENST00000440240 AEBP2Q6ZN18 517 aaPredicted RBP35.71■■■■□ 3.31
CPNE1-219ENST00000440240 ABCC10Q5T3U5 1492 aa35.71■■■■□ 3.31
CPNE1-219ENST00000440240 MAPKBP1O60336 1514 aa35.71■■■■□ 3.31
CPNE1-219ENST00000440240 CARMIL2Q6F5E8 1435 aa35.7■■■■□ 3.31
CPNE1-219ENST00000440240 ADCY10Q96PN6 1610 aa35.7■■■■□ 3.31
CPNE1-219ENST00000440240 TNIKQ9UKE5 1360 aa35.64■■■■□ 3.3
CPNE1-219ENST00000440240 TTBK1Q5TCY1 1321 aaPredicted RBP35.61■■■■□ 3.29
CPNE1-219ENST00000440240 IQGAP2Q13576 1575 aa35.6■■■■□ 3.29
CPNE1-219ENST00000440240 RAPGEF2Q9Y4G8 1499 aa35.58■■■■□ 3.29
CPNE1-219ENST00000440240 DIP2BQ9P265 1576 aa35.54■■■■□ 3.28
CPNE1-219ENST00000440240 ABCC2Q92887 1545 aa35.46■■■■□ 3.27
CPNE1-219ENST00000440240 DISP1Q96F81 1524 aa35.45■■■■□ 3.27
CPNE1-219ENST00000440240 UACAQ9BZF9 1416 aa35.41■■■■□ 3.26
CPNE1-219ENST00000440240 UGGT2Q9NYU1 1516 aa35.41■■■■□ 3.26
CPNE1-219ENST00000440240 UHRF1BP1LA0JNW5 1464 aa35.41■■■■□ 3.26
CPNE1-219ENST00000440240 PLB1Q6P1J6 1458 aa35.35■■■■□ 3.25
CPNE1-219ENST00000440240 ASXL2Q76L83 1435 aa35.33■■■■□ 3.25
CPNE1-219ENST00000440240 TSPOAP1O95153 1857 aa35.26■■■■□ 3.23
CPNE1-219ENST00000440240 KIAA0556O60303 1618 aa35.25■■■■□ 3.23
CPNE1-219ENST00000440240 KDM6BO15054 1643 aa35.24■■■■□ 3.23
CPNE1-219ENST00000440240 KDM5BQ9UGL1 1544 aa35.23■■■■□ 3.23
CPNE1-219ENST00000440240 GLI2P10070 1586 aa35.21■■■■□ 3.23
CPNE1-219ENST00000440240 PRXQ9BXM0 1461 aa35.21■■■■□ 3.23
CPNE1-219ENST00000440240 GOLGA3Q08378 1498 aa35.19■■■■□ 3.22
CPNE1-219ENST00000440240 CTTNBP2Q8WZ74 1663 aa35.15■■■■□ 3.22
CPNE1-219ENST00000440240 EPRSP07814 1512 aaKnown RBP35.11■■■■□ 3.21
CPNE1-219ENST00000440240 ZCCHC11Q5TAX3 1644 aaKnown RBP35.07■■■■□ 3.21
CPNE1-219ENST00000440240 FAM9AQ8IZU1 332 aaPredicted RBP35.06■■■■□ 3.2
CPNE1-219ENST00000440240 CSRNP3Q8WYN3 585 aa35.05■■■■□ 3.2
CPNE1-219ENST00000440240 PPRC1Q5VV67 1664 aaKnown RBP35.01■■■■□ 3.19
CPNE1-219ENST00000440240 WDR7Q9Y4E6 1490 aa34.98■■■■□ 3.19
CPNE1-219ENST00000440240 TEX14Q8IWB6 1497 aa34.97■■■■□ 3.19
CPNE1-219ENST00000440240 MAP3K4Q9Y6R4 1608 aa34.96■■■■□ 3.19
CPNE1-219ENST00000440240 KDM4FA0A1W2PPD8 638 aa34.96■■■■□ 3.19
CPNE1-219ENST00000440240 ABCA8O94911 1581 aa34.96■■■■□ 3.19
CPNE1-219ENST00000440240 KCNH8Q96L42 1107 aa34.9■■■■□ 3.18
CPNE1-219ENST00000440240 P3H3Q8IVL6 736 aa34.89■■■■□ 3.18
CPNE1-219ENST00000440240 COL17A1Q9UMD9 1497 aaPredicted RBP34.87■■■■□ 3.17
CPNE1-219ENST00000440240 EEA1Q15075 1411 aa34.86■■■■□ 3.17
CPNE1-219ENST00000440240 CD109Q6YHK3 1445 aa34.82■■■■□ 3.17
CPNE1-219ENST00000440240 MAGI3Q5TCQ9 1506 aa34.76■■■■□ 3.16
CPNE1-219ENST00000440240 ARID3CA6NKF2 412 aa34.73■■■■□ 3.15
CPNE1-219ENST00000440240 ATP10BO94823 1461 aa34.72■■■■□ 3.15
CPNE1-219ENST00000440240 CFAP43Q8NDM7 1665 aa34.72■■■■□ 3.15
CPNE1-219ENST00000440240 SAMD9Q5K651 1589 aa34.7■■■■□ 3.14
CPNE1-219ENST00000440240 RANGAP1P46060 587 aaPredicted RBP34.64■■■■□ 3.14
CPNE1-219ENST00000440240 ADGRL1O94910 1474 aa34.63■■■■□ 3.13
CPNE1-219ENST00000440240 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP34.61■■■■□ 3.13
CPNE1-219ENST00000440240 HNRNPUL2Q1KMD3 747 aaKnown RBP34.61■■■■□ 3.13
CPNE1-219ENST00000440240 RAPGEF6Q8TEU7 1601 aa34.58■■■■□ 3.13
CPNE1-219ENST00000440240 PHLDB1Q86UU1 1377 aa34.52■■■■□ 3.12
CPNE1-219ENST00000440240 FHOD3Q2V2M9 1422 aa34.51■■■■□ 3.12
CPNE1-219ENST00000440240 ARAP3Q8WWN8 1544 aa34.5■■■■□ 3.11
CPNE1-219ENST00000440240 NUP153P49790 1475 aaKnown RBP34.48■■■■□ 3.11
CPNE1-219ENST00000440240 ABCA9Q8IUA7 1624 aa34.48■■■■□ 3.11
CPNE1-219ENST00000440240 KIF21BO75037 1637 aa34.47■■■■□ 3.11
CPNE1-219ENST00000440240 PLEKHD1A6NEE1 506 aa34.45■■■■□ 3.11
CPNE1-219ENST00000440240 EFCAB5A4FU69 1503 aa34.41■■■■□ 3.1
CPNE1-219ENST00000440240 CHIC1Q5VXU3 224 aa34.39■■■■□ 3.1
CPNE1-219ENST00000440240 UBTFP17480 764 aaKnown RBP34.38■■■■□ 3.09
CPNE1-219ENST00000440240 NEO1Q92859 1461 aa34.37■■■■□ 3.09
CPNE1-219ENST00000440240 RAPGEF3O95398 923 aa34.33■■■■□ 3.09
CPNE1-219ENST00000440240 EHMT2Q96KQ7 1210 aa34.29■■■■□ 3.08
CPNE1-219ENST00000440240 FMN1Q68DA7 1419 aa34.18■■■■□ 3.06
CPNE1-219ENST00000440240 ATP1B4Q9UN42 357 aaPredicted RBP34.17■■■■□ 3.06
CPNE1-219ENST00000440240 AKNAQ7Z591 1439 aa34.15■■■■□ 3.06
CPNE1-219ENST00000440240 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP34.14■■■■□ 3.061e-38■■□□□ 13.2
CPNE1-219ENST00000440240 FANCAO15360 1455 aa34.14■■■■□ 3.06
CPNE1-219ENST00000440240 DENND4BO75064 1496 aaPredicted RBP34.14■■■■□ 3.06
CPNE1-219ENST00000440240 CDK13Q14004 1512 aaKnown RBP34.11■■■■□ 3.05
CPNE1-219ENST00000440240 CDK11AQ9UQ88 783 aaPredicted RBP34.11■■■■□ 3.05
CPNE1-219ENST00000440240 ARHGAP35Q9NRY4 1499 aa34.11■■■■□ 3.05
CPNE1-219ENST00000440240 HECW2Q9P2P5 1572 aa34.11■■■■□ 3.05
CPNE1-219ENST00000440240 ARID4BQ4LE39 1312 aaPredicted RBP34.09■■■■□ 3.05
CPNE1-219ENST00000440240 FRMPD1Q5SYB0 1578 aa34.08■■■■□ 3.05
CPNE1-219ENST00000440240 CFAP74Q9C0B2 1584 aa34.07■■■■□ 3.05
CPNE1-219ENST00000440240 TTC37Q6PGP7 1564 aa34.04■■■■□ 3.04
CPNE1-219ENST00000440240 HECW1Q76N89 1606 aa34.02■■■■□ 3.04
CPNE1-219ENST00000440240 PLCH2O75038 1416 aa34.02■■■■□ 3.04
CPNE1-219ENST00000440240 ADAMTSL3P82987 1691 aa33.99■■■■□ 3.03
CPNE1-219ENST00000440240 PTPRMP28827 1452 aa33.98■■■■□ 3.03
CPNE1-219ENST00000440240 RICTORQ6R327 1708 aa33.98■■■■□ 3.03
CPNE1-219ENST00000440240 EFCAB2Q5VUJ9 269 aa33.96■■■■□ 3.03
CPNE1-219ENST00000440240 SCAPERQ9BY12 1400 aa33.93■■■■□ 3.02
CPNE1-219ENST00000440240 ARHGEF40Q8TER5 1519 aa33.93■■■■□ 3.02
CPNE1-219ENST00000440240 MAGI2Q86UL8 1455 aa33.92■■■■□ 3.02
CPNE1-219ENST00000440240 BCORL1Q5H9F3 1711 aa33.92■■■■□ 3.02
CPNE1-219ENST00000440240 ZMYM4Q5VZL5 1548 aa33.9■■■■□ 3.02
CPNE1-219ENST00000440240 TROQ12816 1431 aaPredicted RBP33.88■■■■□ 3.01
CPNE1-219ENST00000440240 POGZQ7Z3K3 1410 aa33.87■■■■□ 3.01
CPNE1-219ENST00000440240 ILDR1Q86SU0 546 aaPredicted RBP33.87■■■■□ 3.01
CPNE1-219ENST00000440240 CLIP1P30622 1438 aa33.87■■■■□ 3.01
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms