RNA–Protein interactions for RNA: ENST00000440235.6

FMR1-208, Transcript of fragile X mental retardation 1, humanhuman

TSL 1 (best) BASIC

Gene FMR1, Length 4,271 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FMR1-208ENST00000440235 UNC13AQ9UPW8 1703 aa28.13■■■□□ 2.09
FMR1-208ENST00000440235 KIF27Q86VH2 1401 aa28.06■■■□□ 2.08
FMR1-208ENST00000440235 CCDC136Q96JN2 1154 aa28.06■■■□□ 2.08
FMR1-208ENST00000440235 MRS2Q9HD23 443 aa28.06■■■□□ 2.08
FMR1-208ENST00000440235 SUPT16HQ9Y5B9 1047 aaKnown RBP28.05■■■□□ 2.08
FMR1-208ENST00000440235 ARXQ96QS3 562 aa28.05■■■□□ 2.08
FMR1-208ENST00000440235 RAPGEF2Q9Y4G8 1499 aa28.03■■■□□ 2.08
FMR1-208ENST00000440235 ANP32EQ9BTT0 268 aa28.02■■■□□ 2.08
FMR1-208ENST00000440235 SIN3AQ96ST3 1273 aa27.99■■■□□ 2.07
FMR1-208ENST00000440235 CANXP27824 592 aaKnown RBP27.99■■■□□ 2.07
FMR1-208ENST00000440235 VPS8Q8N3P4 1428 aa27.97■■■□□ 2.07
FMR1-208ENST00000440235 SYNJ1O43426 1573 aa27.93■■■□□ 2.06
FMR1-208ENST00000440235 ZBTB47Q9UFB7 747 aaPredicted RBP27.9■■■□□ 2.06
FMR1-208ENST00000440235 TMC1Q8TDI8 760 aa27.87■■■□□ 2.05
FMR1-208ENST00000440235 KDM2AQ9Y2K7 1162 aa27.86■■■□□ 2.05
FMR1-208ENST00000440235 EIF4G1Q04637 1599 aaKnown RBP27.85■■■□□ 2.05
FMR1-208ENST00000440235 RRP7BPQ9NSQ0 103 aa27.85■■■□□ 2.05
FMR1-208ENST00000440235 CUX2O14529 1486 aa27.85■■■□□ 2.05
FMR1-208ENST00000440235 KANK4Q5T7N3 995 aaPredicted RBP27.83■■■□□ 2.05
FMR1-208ENST00000440235 RTN4Q9NQC3 1192 aaKnown RBP27.8■■■□□ 2.04
FMR1-208ENST00000440235 NCAPD3P42695 1498 aa27.73■■■□□ 2.03
FMR1-208ENST00000440235 B4GALNT3Q6L9W6 998 aa27.72■■■□□ 2.03
FMR1-208ENST00000440235 CARMIL1Q5VZK9 1371 aa27.71■■■□□ 2.03
FMR1-208ENST00000440235 CADPSQ9ULU8 1353 aa27.68■■■□□ 2.02
FMR1-208ENST00000440235 PEG3Q9GZU2 1588 aa27.67■■■□□ 2.02
FMR1-208ENST00000440235 SLC24A1O60721 1099 aa27.65■■■□□ 2.02
FMR1-208ENST00000440235 KCNH8Q96L42 1107 aa27.63■■■□□ 2.01
FMR1-208ENST00000440235 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.63■■■□□ 2.018e-7■■□□□ 12.1
FMR1-208ENST00000440235 SENP3Q9H4L4 574 aaPredicted RBP27.63■■■□□ 2.01
FMR1-208ENST00000440235 EIF4G2P78344 907 aaKnown RBP eCLIP27.62■■■□□ 2.01
FMR1-208ENST00000440235 RBM19Q9Y4C8 960 aaKnown RBP27.61■■■□□ 2.01
FMR1-208ENST00000440235 KIF21BO75037 1637 aa27.59■■■□□ 2.01
FMR1-208ENST00000440235 LAS1LQ9Y4W2 734 aaKnown RBP27.58■■■□□ 2.01
FMR1-208ENST00000440235 TSHZ2Q9NRE2 1034 aa27.56■■■□□ 2
FMR1-208ENST00000440235 MTUS2Q5JR59 1369 aa27.53■■■□□ 2
FMR1-208ENST00000440235 CCNB3Q8WWL7 1395 aa27.53■■■□□ 2
FMR1-208ENST00000440235 CHGAP10645 457 aaKnown RBP27.52■■■□□ 2
FMR1-208ENST00000440235 TOP2BQ02880 1626 aa27.51■■■□□ 2
FMR1-208ENST00000440235 CFTRP13569 1480 aa27.47■■□□□ 1.99
FMR1-208ENST00000440235 CUX1P39880 1505 aa27.46■■□□□ 1.99
FMR1-208ENST00000440235 HSP90AA1P07900 732 aaKnown RBP27.45■■□□□ 1.99
FMR1-208ENST00000440235 RGL3Q3MIN7 710 aa27.45■■□□□ 1.98
FMR1-208ENST00000440235 HMGXB3Q12766 1538 aa27.45■■□□□ 1.98
FMR1-208ENST00000440235 IGF1RP08069 1367 aa27.43■■□□□ 1.98
FMR1-208ENST00000440235 FGD5Q6ZNL6 1462 aa27.39■■□□□ 1.97
FMR1-208ENST00000440235 PRXQ9BXM0 1461 aa27.38■■□□□ 1.97
FMR1-208ENST00000440235 FANCD2Q9BXW9 1451 aa27.38■■□□□ 1.97
FMR1-208ENST00000440235 TDRD9Q8NDG6 1382 aaKnown RBP27.38■■□□□ 1.97
FMR1-208ENST00000440235 ARAP1Q96P48 1450 aa27.35■■□□□ 1.97
FMR1-208ENST00000440235 FHAD1B1AJZ9 1412 aa27.34■■□□□ 1.97
FMR1-208ENST00000440235 PPP4R2Q9NY27 417 aa27.33■■□□□ 1.96
FMR1-208ENST00000440235 WDR43Q15061 677 aaKnown RBP eCLIP27.31■■□□□ 1.96
FMR1-208ENST00000440235 UPF2Q9HAU5 1272 aaKnown RBP27.3■■□□□ 1.96
FMR1-208ENST00000440235 ERICH3Q5RHP9 1530 aa27.29■■□□□ 1.96
FMR1-208ENST00000440235 DEKP35659 375 aaKnown RBP27.29■■□□□ 1.96
FMR1-208ENST00000440235 FHOD3Q2V2M9 1422 aa27.28■■□□□ 1.96
FMR1-208ENST00000440235 NEFMP07197 916 aa27.28■■□□□ 1.96
FMR1-208ENST00000440235 RAD54L2Q9Y4B4 1467 aa27.28■■□□□ 1.96
FMR1-208ENST00000440235 RGS3P49796 1198 aa27.27■■□□□ 1.96
FMR1-208ENST00000440235 NOP58Q9Y2X3 529 aaKnown RBP27.27■■□□□ 1.96
FMR1-208ENST00000440235 FOXD1Q16676 465 aa27.26■■□□□ 1.95
FMR1-208ENST00000440235 DHX57Q6P158 1386 aaKnown RBP27.24■■□□□ 1.95
FMR1-208ENST00000440235 GOLGA6L2Q8N9W4 650 aaPredicted RBP27.23■■□□□ 1.95
FMR1-208ENST00000440235 RAB3GAP2Q9H2M9 1393 aa27.22■■□□□ 1.95
FMR1-208ENST00000440235 ARHGAP35Q9NRY4 1499 aa27.21■■□□□ 1.95
FMR1-208ENST00000440235 NEUROD2Q15784 382 aa27.21■■□□□ 1.95
FMR1-208ENST00000440235 TSPY4P0CV99 314 aa27.18■■□□□ 1.94
FMR1-208ENST00000440235 TSPY10P0CW01 314 aa27.18■■□□□ 1.94
FMR1-208ENST00000440235 CC2D2AQ9P2K1 1620 aa27.17■■□□□ 1.94
FMR1-208ENST00000440235 NESP48681 1621 aa27.17■■□□□ 1.94
FMR1-208ENST00000440235 SETD5Q9C0A6 1442 aa27.14■■□□□ 1.93
FMR1-208ENST00000440235 PDS5BQ9NTI5 1447 aa27.14■■□□□ 1.93
FMR1-208ENST00000440235 BIVM-ERCC5R4GMW8 1640 aa27.11■■□□□ 1.93
FMR1-208ENST00000440235 CARD11Q9BXL7 1154 aa27.11■■□□□ 1.93
FMR1-208ENST00000440235 ANP32BQ92688 251 aaKnown RBP27.09■■□□□ 1.93
FMR1-208ENST00000440235 CC2D1BQ5T0F9 858 aaKnown RBP27.08■■□□□ 1.93
FMR1-208ENST00000440235 HSPA5P11021 654 aaKnown RBP27.07■■□□□ 1.92
FMR1-208ENST00000440235 PLPPR3Q6T4P5 718 aa27.07■■□□□ 1.92
FMR1-208ENST00000440235 CHMP7Q8WUX9 453 aaPredicted RBP27.05■■□□□ 1.92
FMR1-208ENST00000440235 ZBTB4Q9P1Z0 1013 aaPredicted RBP27.03■■□□□ 1.92
FMR1-208ENST00000440235 TNNT2P45379 298 aaPredicted RBP27.02■■□□□ 1.92
FMR1-208ENST00000440235 FMN1Q68DA7 1419 aa27.01■■□□□ 1.91
FMR1-208ENST00000440235 PHLDB1Q86UU1 1377 aa26.99■■□□□ 1.91
FMR1-208ENST00000440235 TPRNQ4KMQ1 711 aa26.99■■□□□ 1.91
FMR1-208ENST00000440235 DNAJC5BQ9UF47 199 aa26.99■■□□□ 1.91
FMR1-208ENST00000440235 FRAT1Q92837 279 aaPredicted RBP26.97■■□□□ 1.91
FMR1-208ENST00000440235 RRBP1Q9P2E9 1410 aaKnown RBP26.95■■□□□ 1.91
FMR1-208ENST00000440235 CCER2I3L3R5 266 aa26.95■■□□□ 1.9
FMR1-208ENST00000440235 POLA1P09884 1462 aaPredicted RBP26.94■■□□□ 1.9
FMR1-208ENST00000440235 SPRYD3Q8NCJ5 442 aa26.93■■□□□ 1.9
FMR1-208ENST00000440235 TOPBP1Q92547 1522 aa26.93■■□□□ 1.9
FMR1-208ENST00000440235 LRRC9Q6ZRR7 1453 aa26.92■■□□□ 1.9
FMR1-208ENST00000440235 CFDP1Q9UEE9 299 aaPredicted RBP26.92■■□□□ 1.9
FMR1-208ENST00000440235 DDRGK1Q96HY6 314 aa26.91■■□□□ 1.9
FMR1-208ENST00000440235 PLEKHG5O94827 1062 aa26.9■■□□□ 1.9
FMR1-208ENST00000440235 PPP1R15AO75807 674 aaPredicted RBP26.9■■□□□ 1.9
FMR1-208ENST00000440235 ARID4BQ4LE39 1312 aaPredicted RBP26.89■■□□□ 1.89
FMR1-208ENST00000440235 GAPVD1Q14C86 1478 aa26.88■■□□□ 1.89
FMR1-208ENST00000440235 PPM1GO15355 546 aaPredicted RBP26.88■■□□□ 1.89
FMR1-208ENST00000440235 STAG3Q9UJ98 1225 aa26.86■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms