RNA–Protein interactions for RNA: ENST00000440167.1

SMPD4P2-201, Transcript of sphingomyelin phosphodiesterase 4 pseudogene 2, humanhuman

BASIC

Gene SMPD4P2, Length 1,634 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4P2-201ENST00000440167 VPS8Q8N3P4 1428 aa18.08■□□□□ 0.48
SMPD4P2-201ENST00000440167 GRIN2AQ12879 1464 aa18.07■□□□□ 0.48
SMPD4P2-201ENST00000440167 SYNJ2O15056 1496 aa18.07■□□□□ 0.48
SMPD4P2-201ENST00000440167 CHD1O14646 1710 aa18.04■□□□□ 0.48
SMPD4P2-201ENST00000440167 IQGAP2Q13576 1575 aa18.04■□□□□ 0.48
SMPD4P2-201ENST00000440167 PPARGC1BQ86YN6 1023 aaKnown RBP18.02■□□□□ 0.48
SMPD4P2-201ENST00000440167 EFCAB5A4FU69 1503 aa18.02■□□□□ 0.48
SMPD4P2-201ENST00000440167 SAMD9Q5K651 1589 aa18.01■□□□□ 0.47
SMPD4P2-201ENST00000440167 CEP170Q5SW79 1584 aa18.01■□□□□ 0.47
SMPD4P2-201ENST00000440167 FBLN2P98095 1184 aa18■□□□□ 0.47
SMPD4P2-201ENST00000440167 CHMP7Q8WUX9 453 aaPredicted RBP18■□□□□ 0.47
SMPD4P2-201ENST00000440167 P3H3Q8IVL6 736 aa17.98■□□□□ 0.47
SMPD4P2-201ENST00000440167 FHOD3Q2V2M9 1422 aa17.97■□□□□ 0.47
SMPD4P2-201ENST00000440167 KIAA0586Q9BVV6 1533 aa17.94■□□□□ 0.46
SMPD4P2-201ENST00000440167 PCF11O94913 1555 aaKnown RBP17.92■□□□□ 0.46
SMPD4P2-201ENST00000440167 TTBK1Q5TCY1 1321 aaPredicted RBP17.92■□□□□ 0.46
SMPD4P2-201ENST00000440167 NUP160Q12769 1436 aa17.92■□□□□ 0.46
SMPD4P2-201ENST00000440167 UGGT2Q9NYU1 1516 aa17.91■□□□□ 0.46
SMPD4P2-201ENST00000440167 PCGF6Q9BYE7 350 aa17.89■□□□□ 0.45
SMPD4P2-201ENST00000440167 KIAA0556O60303 1618 aa17.87■□□□□ 0.45
SMPD4P2-201ENST00000440167 TRIM26Q12899 539 aaPredicted RBP17.86■□□□□ 0.45
SMPD4P2-201ENST00000440167 APLP2Q06481 763 aa17.85■□□□□ 0.45
SMPD4P2-201ENST00000440167 LRRIQ1Q96JM4 1722 aa17.84■□□□□ 0.45
SMPD4P2-201ENST00000440167 DISP1Q96F81 1524 aa17.84■□□□□ 0.45
SMPD4P2-201ENST00000440167 CFAP43Q8NDM7 1665 aa17.83■□□□□ 0.45
SMPD4P2-201ENST00000440167 FMN1Q68DA7 1419 aa17.82■□□□□ 0.44
SMPD4P2-201ENST00000440167 FYCO1Q9BQS8 1478 aa17.81■□□□□ 0.44
SMPD4P2-201ENST00000440167 TIAM1Q13009 1591 aa17.81■□□□□ 0.44
SMPD4P2-201ENST00000440167 CASKIN1Q8WXD9 1431 aa17.8■□□□□ 0.44
SMPD4P2-201ENST00000440167 ATP1B4Q9UN42 357 aaPredicted RBP17.77■□□□□ 0.44
SMPD4P2-201ENST00000440167 SHROOM2Q13796 1616 aa17.75■□□□□ 0.43
SMPD4P2-201ENST00000440167 KANK4Q5T7N3 995 aaPredicted RBP17.75■□□□□ 0.43
SMPD4P2-201ENST00000440167 JPH4Q96JJ6 628 aa17.75■□□□□ 0.43
SMPD4P2-201ENST00000440167 MAP3K1Q13233 1512 aa17.74■□□□□ 0.43
SMPD4P2-201ENST00000440167 HECW1Q76N89 1606 aa17.74■□□□□ 0.43
SMPD4P2-201ENST00000440167 CLASP1Q7Z460 1538 aa17.72■□□□□ 0.43
SMPD4P2-201ENST00000440167 CARMIL2Q6F5E8 1435 aa17.71■□□□□ 0.43
SMPD4P2-201ENST00000440167 RAPGEF6Q8TEU7 1601 aa17.7■□□□□ 0.42
SMPD4P2-201ENST00000440167 PRG4Q92954 1404 aaPredicted RBP17.69■□□□□ 0.42
SMPD4P2-201ENST00000440167 LRRC9Q6ZRR7 1453 aa17.68■□□□□ 0.42
SMPD4P2-201ENST00000440167 ERCC6L2Q5T890 1561 aa17.66■□□□□ 0.42
SMPD4P2-201ENST00000440167 CDK13Q14004 1512 aaKnown RBP17.64■□□□□ 0.41
SMPD4P2-201ENST00000440167 CCDC18Q5T9S5 1454 aa17.63■□□□□ 0.41
SMPD4P2-201ENST00000440167 EPRSP07814 1512 aaKnown RBP17.63■□□□□ 0.41
SMPD4P2-201ENST00000440167 PLB1Q6P1J6 1458 aa17.61■□□□□ 0.41
SMPD4P2-201ENST00000440167 NUP153P49790 1475 aaKnown RBP17.6■□□□□ 0.41
SMPD4P2-201ENST00000440167 ARID3CA6NKF2 412 aa17.6■□□□□ 0.41
SMPD4P2-201ENST00000440167 ABCA8O94911 1581 aa17.59■□□□□ 0.41
SMPD4P2-201ENST00000440167 MAGI3Q5TCQ9 1506 aa17.59■□□□□ 0.41
SMPD4P2-201ENST00000440167 EHBP1L1Q8N3D4 1523 aa17.57■□□□□ 0.4
SMPD4P2-201ENST00000440167 SUPT6HQ7KZ85 1726 aaKnown RBP17.57■□□□□ 0.4
SMPD4P2-201ENST00000440167 MTUS2Q5JR59 1369 aa17.55■□□□□ 0.4
SMPD4P2-201ENST00000440167 PTPRGP23470 1445 aa17.54■□□□□ 0.4
SMPD4P2-201ENST00000440167 PHLDB1Q86UU1 1377 aa17.53■□□□□ 0.4
SMPD4P2-201ENST00000440167 RRBP1Q9P2E9 1410 aaKnown RBP17.51■□□□□ 0.39
SMPD4P2-201ENST00000440167 OSCARQ8IYS5 282 aa17.5■□□□□ 0.39
SMPD4P2-201ENST00000440167 NCOA2Q15596 1464 aa17.48■□□□□ 0.39
SMPD4P2-201ENST00000440167 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.48■□□□□ 0.39
SMPD4P2-201ENST00000440167 HNRNPUL2Q1KMD3 747 aaKnown RBP17.48■□□□□ 0.39
SMPD4P2-201ENST00000440167 UACAQ9BZF9 1416 aa17.46■□□□□ 0.39
SMPD4P2-201ENST00000440167 CCNB3Q8WWL7 1395 aa17.45■□□□□ 0.38
SMPD4P2-201ENST00000440167 ARHGEF11O15085 1522 aa17.45■□□□□ 0.38
SMPD4P2-201ENST00000440167 ATP10BO94823 1461 aa17.44■□□□□ 0.38
SMPD4P2-201ENST00000440167 ABCC2Q92887 1545 aa17.44■□□□□ 0.38
SMPD4P2-201ENST00000440167 ADCY10Q96PN6 1610 aa17.43■□□□□ 0.38
SMPD4P2-201ENST00000440167 KIF14Q15058 1648 aa17.42■□□□□ 0.38
SMPD4P2-201ENST00000440167 TROQ12816 1431 aaPredicted RBP17.4■□□□□ 0.38
SMPD4P2-201ENST00000440167 MYOM3Q5VTT5 1437 aa17.4■□□□□ 0.38
SMPD4P2-201ENST00000440167 FGD6Q6ZV73 1430 aa17.4■□□□□ 0.38
SMPD4P2-201ENST00000440167 ZCCHC11Q5TAX3 1644 aaKnown RBP17.39■□□□□ 0.37
SMPD4P2-201ENST00000440167 CDK11AQ9UQ88 783 aaPredicted RBP17.39■□□□□ 0.37
SMPD4P2-201ENST00000440167 PTPN23Q9H3S7 1636 aa17.37■□□□□ 0.37
SMPD4P2-201ENST00000440167 UHRF1BP1LA0JNW5 1464 aa17.36■□□□□ 0.37
SMPD4P2-201ENST00000440167 FAM50AQ14320 339 aaKnown RBP17.36■□□□□ 0.37
SMPD4P2-201ENST00000440167 ITSN2Q9NZM3 1697 aa17.35■□□□□ 0.37
SMPD4P2-201ENST00000440167 HRCP23327 699 aa17.35■□□□□ 0.37
SMPD4P2-201ENST00000440167 ITGAEP38570 1179 aa17.35■□□□□ 0.37
SMPD4P2-201ENST00000440167 CDC42BPAQ5VT25 1732 aa17.33■□□□□ 0.36
SMPD4P2-201ENST00000440167 PLEKHD1A6NEE1 506 aa17.32■□□□□ 0.36
SMPD4P2-201ENST00000440167 KDM5BQ9UGL1 1544 aa17.31■□□□□ 0.36
SMPD4P2-201ENST00000440167 TCOF1Q13428 1488 aaKnown RBP17.28■□□□□ 0.36
SMPD4P2-201ENST00000440167 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.28■□□□□ 0.36
SMPD4P2-201ENST00000440167 ABCC10Q5T3U5 1492 aa17.27■□□□□ 0.36
SMPD4P2-201ENST00000440167 MIA2Q96PC5 1412 aa17.26■□□□□ 0.35
SMPD4P2-201ENST00000440167 RIMBP3CA6NJZ7 1639 aa17.26■□□□□ 0.35
SMPD4P2-201ENST00000440167 RIMBP3BA6NNM3 1639 aa17.26■□□□□ 0.35
SMPD4P2-201ENST00000440167 RIMBP3Q9UFD9 1639 aa17.26■□□□□ 0.35
SMPD4P2-201ENST00000440167 GPATCH8Q9UKJ3 1502 aaKnown RBP17.25■□□□□ 0.35
SMPD4P2-201ENST00000440167 TTC37Q6PGP7 1564 aa17.25■□□□□ 0.35
SMPD4P2-201ENST00000440167 CDC42BPBQ9Y5S2 1711 aa17.24■□□□□ 0.35
SMPD4P2-201ENST00000440167 PREX2Q70Z35 1606 aa17.23■□□□□ 0.35
SMPD4P2-201ENST00000440167 MYO5CQ9NQX4 1742 aa17.22■□□□□ 0.35
SMPD4P2-201ENST00000440167 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.22■□□□□ 0.35
SMPD4P2-201ENST00000440167 CAMSAP2Q08AD1 1489 aa17.21■□□□□ 0.35
SMPD4P2-201ENST00000440167 PTPRKQ15262 1439 aa17.21■□□□□ 0.35
SMPD4P2-201ENST00000440167 DNMT1P26358 1616 aaKnown RBP17.19■□□□□ 0.34
SMPD4P2-201ENST00000440167 CCER1Q8TC90 406 aaPredicted RBP17.19■□□□□ 0.34
SMPD4P2-201ENST00000440167 ZNF644Q9H582 1327 aaPredicted RBP17.18■□□□□ 0.34
SMPD4P2-201ENST00000440167 KCNH8Q96L42 1107 aa17.18■□□□□ 0.34
SMPD4P2-201ENST00000440167 CFDP1Q9UEE9 299 aaPredicted RBP17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms