RNA–Protein interactions for RNA: ENST00000440088.5

APTR-204, Transcript of Alu-mediated CDKN1A/p21 transcriptional regulator, humanhuman

TSL 1 (best) BASIC

Gene APTR, Length 2,029 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTR-204ENST00000440088 ARAP1Q96P48 1450 aa30.85■■■□□ 2.53
APTR-204ENST00000440088 SYNJ2O15056 1496 aa30.76■■■□□ 2.51
APTR-204ENST00000440088 GRIN2AQ12879 1464 aa30.75■■■□□ 2.51
APTR-204ENST00000440088 EFCAB5A4FU69 1503 aa30.73■■■□□ 2.51
APTR-204ENST00000440088 CHMP7Q8WUX9 453 aaPredicted RBP30.71■■■□□ 2.51
APTR-204ENST00000440088 TRIM26Q12899 539 aaPredicted RBP30.68■■■□□ 2.5
APTR-204ENST00000440088 IQGAP2Q13576 1575 aa30.66■■■□□ 2.5
APTR-204ENST00000440088 PPARGC1BQ86YN6 1023 aaKnown RBP30.66■■■□□ 2.5
APTR-204ENST00000440088 PCGF6Q9BYE7 350 aa30.64■■■□□ 2.5
APTR-204ENST00000440088 FBLN2P98095 1184 aa30.62■■■□□ 2.49
APTR-204ENST00000440088 APLP2Q06481 763 aa30.61■■■□□ 2.49
APTR-204ENST00000440088 KIAA0586Q9BVV6 1533 aa30.61■■■□□ 2.49
APTR-204ENST00000440088 SAMD9Q5K651 1589 aa30.61■■■□□ 2.49
APTR-204ENST00000440088 P3H3Q8IVL6 736 aa30.59■■■□□ 2.49
APTR-204ENST00000440088 FHOD3Q2V2M9 1422 aa30.57■■■□□ 2.48
APTR-204ENST00000440088 CEP170Q5SW79 1584 aa30.54■■■□□ 2.48
APTR-204ENST00000440088 NUP160Q12769 1436 aa30.52■■■□□ 2.48
APTR-204ENST00000440088 UGGT2Q9NYU1 1516 aa30.51■■■□□ 2.47
APTR-204ENST00000440088 FMN1Q68DA7 1419 aa30.48■■■□□ 2.47
APTR-204ENST00000440088 TTBK1Q5TCY1 1321 aaPredicted RBP30.45■■■□□ 2.46
APTR-204ENST00000440088 CHD1O14646 1710 aa30.42■■■□□ 2.46
APTR-204ENST00000440088 PCF11O94913 1555 aaKnown RBP30.41■■■□□ 2.46
APTR-204ENST00000440088 FYCO1Q9BQS8 1478 aa30.39■■■□□ 2.45
APTR-204ENST00000440088 CASKIN1Q8WXD9 1431 aa30.38■■■□□ 2.45
APTR-204ENST00000440088 MAP3K1Q13233 1512 aa30.36■■■□□ 2.45
APTR-204ENST00000440088 DISP1Q96F81 1524 aa30.35■■■□□ 2.45
APTR-204ENST00000440088 KIAA0556O60303 1618 aa30.34■■■□□ 2.45
APTR-204ENST00000440088 TIAM1Q13009 1591 aa30.31■■■□□ 2.44
APTR-204ENST00000440088 JPH4Q96JJ6 628 aa30.3■■■□□ 2.44
APTR-204ENST00000440088 KANK4Q5T7N3 995 aaPredicted RBP30.29■■■□□ 2.44
APTR-204ENST00000440088 ATP1B4Q9UN42 357 aaPredicted RBP30.29■■■□□ 2.44
APTR-204ENST00000440088 CFAP43Q8NDM7 1665 aa30.25■■■□□ 2.43
APTR-204ENST00000440088 CARMIL2Q6F5E8 1435 aa30.25■■■□□ 2.43
APTR-204ENST00000440088 LRRC9Q6ZRR7 1453 aa30.18■■■□□ 2.42
APTR-204ENST00000440088 HECW1Q76N89 1606 aa30.15■■■□□ 2.42
APTR-204ENST00000440088 LRRIQ1Q96JM4 1722 aa30.11■■■□□ 2.41
APTR-204ENST00000440088 PRG4Q92954 1404 aaPredicted RBP30.11■■■□□ 2.41
APTR-204ENST00000440088 SHROOM2Q13796 1616 aa30.1■■■□□ 2.41
APTR-204ENST00000440088 CCDC18Q5T9S5 1454 aa30.1■■■□□ 2.41
APTR-204ENST00000440088 CLASP1Q7Z460 1538 aa30.07■■■□□ 2.4
APTR-204ENST00000440088 RAPGEF6Q8TEU7 1601 aa30.05■■■□□ 2.4
APTR-204ENST00000440088 EPRSP07814 1512 aaKnown RBP30.03■■■□□ 2.4
APTR-204ENST00000440088 MTUS2Q5JR59 1369 aa30■■■□□ 2.39
APTR-204ENST00000440088 NUP153P49790 1475 aaKnown RBP29.97■■■□□ 2.39
APTR-204ENST00000440088 PLB1Q6P1J6 1458 aa29.96■■■□□ 2.39
APTR-204ENST00000440088 RRBP1Q9P2E9 1410 aaKnown RBP29.95■■■□□ 2.38
APTR-204ENST00000440088 CDK13Q14004 1512 aaKnown RBP29.94■■■□□ 2.38
APTR-204ENST00000440088 EHBP1L1Q8N3D4 1523 aa29.93■■■□□ 2.38
APTR-204ENST00000440088 PTPRGP23470 1445 aa29.93■■■□□ 2.38
APTR-204ENST00000440088 ABCA8O94911 1581 aa29.89■■■□□ 2.38
APTR-204ENST00000440088 PHLDB1Q86UU1 1377 aa29.89■■■□□ 2.37
APTR-204ENST00000440088 ARID3CA6NKF2 412 aa29.88■■■□□ 2.37
APTR-204ENST00000440088 MAGI3Q5TCQ9 1506 aa29.87■■■□□ 2.37
APTR-204ENST00000440088 ERCC6L2Q5T890 1561 aa29.87■■■□□ 2.37
APTR-204ENST00000440088 CCNB3Q8WWL7 1395 aa29.86■■■□□ 2.37
APTR-204ENST00000440088 SUPT6HQ7KZ85 1726 aaKnown RBP29.85■■■□□ 2.37
APTR-204ENST00000440088 OSCARQ8IYS5 282 aa29.84■■■□□ 2.37
APTR-204ENST00000440088 CDK11AQ9UQ88 783 aaPredicted RBP29.81■■■□□ 2.36
APTR-204ENST00000440088 NCOA2Q15596 1464 aa29.81■■■□□ 2.36
APTR-204ENST00000440088 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.8■■■□□ 2.36
APTR-204ENST00000440088 HNRNPUL2Q1KMD3 747 aaKnown RBP29.8■■■□□ 2.36
APTR-204ENST00000440088 UACAQ9BZF9 1416 aa29.76■■■□□ 2.35
APTR-204ENST00000440088 ARHGEF11O15085 1522 aa29.75■■■□□ 2.35
APTR-204ENST00000440088 ATP10BO94823 1461 aa29.71■■■□□ 2.35
APTR-204ENST00000440088 MYOM3Q5VTT5 1437 aa29.7■■■□□ 2.35
APTR-204ENST00000440088 FGD6Q6ZV73 1430 aa29.69■■■□□ 2.34
APTR-204ENST00000440088 HRCP23327 699 aa29.69■■■□□ 2.34
APTR-204ENST00000440088 TROQ12816 1431 aaPredicted RBP29.68■■■□□ 2.34
APTR-204ENST00000440088 ABCC2Q92887 1545 aa29.66■■■□□ 2.34
APTR-204ENST00000440088 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.66■■■□□ 2.34
APTR-204ENST00000440088 FAM50AQ14320 339 aaKnown RBP29.65■■■□□ 2.34
APTR-204ENST00000440088 PLEKHD1A6NEE1 506 aa29.62■■■□□ 2.33
APTR-204ENST00000440088 UHRF1BP1LA0JNW5 1464 aa29.59■■■□□ 2.33
APTR-204ENST00000440088 ADCY10Q96PN6 1610 aa29.58■■■□□ 2.33
APTR-204ENST00000440088 ITGAEP38570 1179 aa29.57■■■□□ 2.32
APTR-204ENST00000440088 MIA2Q96PC5 1412 aa29.54■■■□□ 2.32
APTR-204ENST00000440088 PTPN23Q9H3S7 1636 aa29.53■■■□□ 2.32
APTR-204ENST00000440088 KIF14Q15058 1648 aa29.52■■■□□ 2.32
APTR-204ENST00000440088 TCOF1Q13428 1488 aaKnown RBP29.49■■■□□ 2.31
APTR-204ENST00000440088 KDM5BQ9UGL1 1544 aa29.47■■■□□ 2.31
APTR-204ENST00000440088 CCER1Q8TC90 406 aaPredicted RBP29.47■■■□□ 2.31
APTR-204ENST00000440088 ZCCHC11Q5TAX3 1644 aaKnown RBP29.45■■■□□ 2.3
APTR-204ENST00000440088 ITSN2Q9NZM3 1697 aa29.45■■■□□ 2.3
APTR-204ENST00000440088 ZEB1P37275 1124 aaPredicted RBP29.43■■■□□ 2.3
APTR-204ENST00000440088 GPATCH8Q9UKJ3 1502 aaKnown RBP29.41■■■□□ 2.3
APTR-204ENST00000440088 ABCC10Q5T3U5 1492 aa29.41■■■□□ 2.3
APTR-204ENST00000440088 CFDP1Q9UEE9 299 aaPredicted RBP29.37■■■□□ 2.29
APTR-204ENST00000440088 CDC42BPAQ5VT25 1732 aa29.34■■■□□ 2.29
APTR-204ENST00000440088 SETD5Q9C0A6 1442 aa29.32■■■□□ 2.28
APTR-204ENST00000440088 PTPRKQ15262 1439 aa29.32■■■□□ 2.28
APTR-204ENST00000440088 RAB3GAP2Q9H2M9 1393 aa29.28■■■□□ 2.28
APTR-204ENST00000440088 ZNF644Q9H582 1327 aaPredicted RBP29.28■■■□□ 2.28
APTR-204ENST00000440088 CAMSAP2Q08AD1 1489 aa29.28■■■□□ 2.28
APTR-204ENST00000440088 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.26■■■□□ 2.27
APTR-204ENST00000440088 DNMT1P26358 1616 aaKnown RBP29.24■■■□□ 2.27
APTR-204ENST00000440088 TTC37Q6PGP7 1564 aa29.24■■■□□ 2.27
APTR-204ENST00000440088 KCNH8Q96L42 1107 aa29.23■■■□□ 2.27
APTR-204ENST00000440088 ZNF777Q9ULD5 760 aaPredicted RBP29.23■■■□□ 2.27
APTR-204ENST00000440088 HFM1A2PYH4 1435 aa29.23■■■□□ 2.27
APTR-204ENST00000440088 PREX2Q70Z35 1606 aa29.23■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms