RNA–Protein interactions for RNA: ENST00000439475.1

MCF2L-216, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-216ENST00000439475 RUSC2Q8N2Y8 1516 aa17.58■□□□□ 0.41
MCF2L-216ENST00000439475 PRG4Q92954 1404 aaPredicted RBP17.58■□□□□ 0.41
MCF2L-216ENST00000439475 RAPGEF2Q9Y4G8 1499 aa17.56■□□□□ 0.4
MCF2L-216ENST00000439475 ERCC6L2Q5T890 1561 aa17.53■□□□□ 0.4
MCF2L-216ENST00000439475 TRHP20396 242 aaPredicted RBP17.53■□□□□ 0.4
MCF2L-216ENST00000439475 CSRNP3Q8WYN3 585 aa17.49■□□□□ 0.39
MCF2L-216ENST00000439475 CARMIL2Q6F5E8 1435 aa17.47■□□□□ 0.39
MCF2L-216ENST00000439475 EEA1Q15075 1411 aa17.47■□□□□ 0.39
MCF2L-216ENST00000439475 NPM1P06748 294 aaKnown RBP eCLIP17.45■□□□□ 0.38
MCF2L-216ENST00000439475 CHIC1Q5VXU3 224 aa17.45■□□□□ 0.38
MCF2L-216ENST00000439475 IQGAP2Q13576 1575 aa17.45■□□□□ 0.38
MCF2L-216ENST00000439475 PRXQ9BXM0 1461 aa17.43■□□□□ 0.38
MCF2L-216ENST00000439475 PTPRGP23470 1445 aa17.4■□□□□ 0.38
MCF2L-216ENST00000439475 FAM9AQ8IZU1 332 aaPredicted RBP17.4■□□□□ 0.38
MCF2L-216ENST00000439475 TNIKQ9UKE5 1360 aa17.4■□□□□ 0.38
MCF2L-216ENST00000439475 TTBK1Q5TCY1 1321 aaPredicted RBP17.39■□□□□ 0.37
MCF2L-216ENST00000439475 UGGT2Q9NYU1 1516 aa17.35■□□□□ 0.37
MCF2L-216ENST00000439475 CTTNBP2Q8WZ74 1663 aa17.35■□□□□ 0.37
MCF2L-216ENST00000439475 GOLGA3Q08378 1498 aa17.31■□□□□ 0.36
MCF2L-216ENST00000439475 DISP1Q96F81 1524 aa17.31■□□□□ 0.36
MCF2L-216ENST00000439475 KIAA0556O60303 1618 aa17.26■□□□□ 0.35
MCF2L-216ENST00000439475 UACAQ9BZF9 1416 aa17.26■□□□□ 0.35
MCF2L-216ENST00000439475 ADCY10Q96PN6 1610 aa17.25■□□□□ 0.35
MCF2L-216ENST00000439475 UHRF1BP1LA0JNW5 1464 aa17.22■□□□□ 0.35
MCF2L-216ENST00000439475 UBTFP17480 764 aaKnown RBP17.21■□□□□ 0.35
MCF2L-216ENST00000439475 FAM69CQ0P6D2 419 aa17.21■□□□□ 0.35
MCF2L-216ENST00000439475 KIF21BO75037 1637 aa17.21■□□□□ 0.35
MCF2L-216ENST00000439475 MAPKBP1O60336 1514 aa17.21■□□□□ 0.34
MCF2L-216ENST00000439475 P3H3Q8IVL6 736 aa17.2■□□□□ 0.34
MCF2L-216ENST00000439475 ABCC2Q92887 1545 aa17.2■□□□□ 0.34
MCF2L-216ENST00000439475 RANGAP1P46060 587 aaPredicted RBP17.18■□□□□ 0.34
MCF2L-216ENST00000439475 ABCC10Q5T3U5 1492 aa17.17■□□□□ 0.34
MCF2L-216ENST00000439475 EHMT2Q96KQ7 1210 aa17.15■□□□□ 0.34
MCF2L-216ENST00000439475 PLB1Q6P1J6 1458 aa17.14■□□□□ 0.33
MCF2L-216ENST00000439475 KIF13AQ9H1H9 1805 aa17.12■□□□□ 0.33
MCF2L-216ENST00000439475 KDM5BQ9UGL1 1544 aa17.12■□□□□ 0.33
MCF2L-216ENST00000439475 ASXL2Q76L83 1435 aa17.11■□□□□ 0.33
MCF2L-216ENST00000439475 SAMD9Q5K651 1589 aa17.09■□□□□ 0.33
MCF2L-216ENST00000439475 DIP2BQ9P265 1576 aa17.09■□□□□ 0.33
MCF2L-216ENST00000439475 ABCA8O94911 1581 aa17.08■□□□□ 0.32
MCF2L-216ENST00000439475 ZCCHC11Q5TAX3 1644 aaKnown RBP17.07■□□□□ 0.32
MCF2L-216ENST00000439475 EFCAB5A4FU69 1503 aa17.06■□□□□ 0.32
MCF2L-216ENST00000439475 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.04■□□□□ 0.32
MCF2L-216ENST00000439475 HNRNPUL2Q1KMD3 747 aaKnown RBP17.04■□□□□ 0.32
MCF2L-216ENST00000439475 FHOD3Q2V2M9 1422 aa17.03■□□□□ 0.32
MCF2L-216ENST00000439475 GLI2P10070 1586 aa17.02■□□□□ 0.31
MCF2L-216ENST00000439475 KCNH8Q96L42 1107 aa17.01■□□□□ 0.31
MCF2L-216ENST00000439475 WDR7Q9Y4E6 1490 aa17■□□□□ 0.31
MCF2L-216ENST00000439475 ARID3CA6NKF2 412 aa17■□□□□ 0.31
MCF2L-216ENST00000439475 TSPOAP1O95153 1857 aa17■□□□□ 0.31
MCF2L-216ENST00000439475 EPRSP07814 1512 aaKnown RBP17■□□□□ 0.31
MCF2L-216ENST00000439475 RAPGEF6Q8TEU7 1601 aa16.99■□□□□ 0.31
MCF2L-216ENST00000439475 ATP10BO94823 1461 aa16.99■□□□□ 0.31
MCF2L-216ENST00000439475 PLEKHD1A6NEE1 506 aa16.95■□□□□ 0.3
MCF2L-216ENST00000439475 ATP1B4Q9UN42 357 aaPredicted RBP16.95■□□□□ 0.3
MCF2L-216ENST00000439475 FMN1Q68DA7 1419 aa16.95■□□□□ 0.3
MCF2L-216ENST00000439475 TEX14Q8IWB6 1497 aa16.93■□□□□ 0.3
MCF2L-216ENST00000439475 ARHGAP35Q9NRY4 1499 aa16.93■□□□□ 0.3
MCF2L-216ENST00000439475 CD109Q6YHK3 1445 aa16.9■□□□□ 0.3
MCF2L-216ENST00000439475 NUP153P49790 1475 aaKnown RBP16.9■□□□□ 0.3
MCF2L-216ENST00000439475 KDM6BO15054 1643 aa16.89■□□□□ 0.29
MCF2L-216ENST00000439475 MAP3K4Q9Y6R4 1608 aa16.89■□□□□ 0.29
MCF2L-216ENST00000439475 CDK11AQ9UQ88 783 aaPredicted RBP16.88■□□□□ 0.29
MCF2L-216ENST00000439475 CFAP43Q8NDM7 1665 aa16.88■□□□□ 0.29
MCF2L-216ENST00000439475 MAGI3Q5TCQ9 1506 aa16.85■□□□□ 0.29
MCF2L-216ENST00000439475 PPRC1Q5VV67 1664 aaKnown RBP16.84■□□□□ 0.29
MCF2L-216ENST00000439475 CLIP1P30622 1438 aa16.83■□□□□ 0.28
MCF2L-216ENST00000439475 HECW1Q76N89 1606 aa16.82■□□□□ 0.28
MCF2L-216ENST00000439475 PHLDB1Q86UU1 1377 aa16.79■□□□□ 0.28
MCF2L-216ENST00000439475 ABCA9Q8IUA7 1624 aa16.79■□□□□ 0.28
MCF2L-216ENST00000439475 CDK13Q14004 1512 aaKnown RBP16.77■□□□□ 0.28
MCF2L-216ENST00000439475 AEBP2Q6ZN18 517 aaPredicted RBP16.76■□□□□ 0.27
MCF2L-216ENST00000439475 CASKIN1Q8WXD9 1431 aa16.76■□□□□ 0.27
MCF2L-216ENST00000439475 LOC105371045A0A1W2PR82 267 aa16.74■□□□□ 0.27
MCF2L-216ENST00000439475 COL17A1Q9UMD9 1497 aaPredicted RBP16.73■□□□□ 0.27
MCF2L-216ENST00000439475 CCDC18Q5T9S5 1454 aa16.73■□□□□ 0.27
MCF2L-216ENST00000439475 NEO1Q92859 1461 aa16.72■□□□□ 0.27
MCF2L-216ENST00000439475 CEP162Q5TB80 1403 aa16.7■□□□□ 0.26
MCF2L-216ENST00000439475 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.7■□□□□ 0.26
MCF2L-216ENST00000439475 ARAP3Q8WWN8 1544 aa16.7■□□□□ 0.26
MCF2L-216ENST00000439475 TROQ12816 1431 aaPredicted RBP16.7■□□□□ 0.26
MCF2L-216ENST00000439475 FYCO1Q9BQS8 1478 aa16.69■□□□□ 0.26
MCF2L-216ENST00000439475 PCF11O94913 1555 aaKnown RBP16.68■□□□□ 0.26
MCF2L-216ENST00000439475 EFCAB2Q5VUJ9 269 aa16.67■□□□□ 0.26
MCF2L-216ENST00000439475 PLCH2O75038 1416 aa16.65■□□□□ 0.26
MCF2L-216ENST00000439475 AKNAQ7Z591 1439 aa16.65■□□□□ 0.26
MCF2L-216ENST00000439475 FANCAO15360 1455 aa16.65■□□□□ 0.26
MCF2L-216ENST00000439475 CFAP74Q9C0B2 1584 aa16.64■□□□□ 0.25
MCF2L-216ENST00000439475 KIF14Q15058 1648 aa16.64■□□□□ 0.25
MCF2L-216ENST00000439475 LRRIQ1Q96JM4 1722 aa16.64■□□□□ 0.25
MCF2L-216ENST00000439475 RAPGEF3O95398 923 aa16.63■□□□□ 0.25
MCF2L-216ENST00000439475 TTC37Q6PGP7 1564 aa16.63■□□□□ 0.25
MCF2L-216ENST00000439475 DENND4BO75064 1496 aaPredicted RBP16.61■□□□□ 0.25
MCF2L-216ENST00000439475 MYO5CQ9NQX4 1742 aa16.6■□□□□ 0.25
MCF2L-216ENST00000439475 MTUS2Q5JR59 1369 aa16.59■□□□□ 0.25
MCF2L-216ENST00000439475 KDM4FA0A1W2PPD8 638 aa16.57■□□□□ 0.24
MCF2L-216ENST00000439475 ARHGAP5Q13017 1502 aa16.56■□□□□ 0.24
MCF2L-216ENST00000439475 ADGRL1O94910 1474 aa16.56■□□□□ 0.24
MCF2L-216ENST00000439475 SCAPERQ9BY12 1400 aa16.56■□□□□ 0.24
MCF2L-216ENST00000439475 VPS8Q8N3P4 1428 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms