RNA–Protein interactions for RNA: ENST00000439286.5

GARNL3-206, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 5

Gene GARNL3, Length 905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-206ENST00000439286 SHROOM2Q13796 1616 aa23.43■■□□□ 1.34
GARNL3-206ENST00000439286 KIAA0586Q9BVV6 1533 aa23.33■■□□□ 1.33
GARNL3-206ENST00000439286 CARMIL1Q5VZK9 1371 aa23.33■■□□□ 1.33
GARNL3-206ENST00000439286 RUSC2Q8N2Y8 1516 aa23.31■■□□□ 1.32
GARNL3-206ENST00000439286 AEBP2Q6ZN18 517 aaPredicted RBP23.28■■□□□ 1.32
GARNL3-206ENST00000439286 CUL7Q14999 1698 aa23.26■■□□□ 1.31
GARNL3-206ENST00000439286 FAM69CQ0P6D2 419 aa23.25■■□□□ 1.31
GARNL3-206ENST00000439286 TTBK1Q5TCY1 1321 aaPredicted RBP23.23■■□□□ 1.31
GARNL3-206ENST00000439286 PTPRGP23470 1445 aa23.2■■□□□ 1.3
GARNL3-206ENST00000439286 CARMIL2Q6F5E8 1435 aa23.19■■□□□ 1.3
GARNL3-206ENST00000439286 TNIKQ9UKE5 1360 aa23.14■■□□□ 1.29
GARNL3-206ENST00000439286 ABCC10Q5T3U5 1492 aa23.13■■□□□ 1.29
GARNL3-206ENST00000439286 MAPKBP1O60336 1514 aa23.1■■□□□ 1.29
GARNL3-206ENST00000439286 RAPGEF2Q9Y4G8 1499 aa23.08■■□□□ 1.29
GARNL3-206ENST00000439286 ADCY10Q96PN6 1610 aa23.07■■□□□ 1.28
GARNL3-206ENST00000439286 IQGAP2Q13576 1575 aa23.04■■□□□ 1.28
GARNL3-206ENST00000439286 UACAQ9BZF9 1416 aa22.98■■□□□ 1.27
GARNL3-206ENST00000439286 ABCC2Q92887 1545 aa22.98■■□□□ 1.27
GARNL3-206ENST00000439286 KIF13AQ9H1H9 1805 aa22.96■■□□□ 1.27
GARNL3-206ENST00000439286 DIP2BQ9P265 1576 aa22.96■■□□□ 1.27
GARNL3-206ENST00000439286 DISP1Q96F81 1524 aa22.93■■□□□ 1.26
GARNL3-206ENST00000439286 UHRF1BP1LA0JNW5 1464 aa22.93■■□□□ 1.26
GARNL3-206ENST00000439286 PLB1Q6P1J6 1458 aa22.93■■□□□ 1.26
GARNL3-206ENST00000439286 FAM9AQ8IZU1 332 aaPredicted RBP22.92■■□□□ 1.26
GARNL3-206ENST00000439286 ASXL2Q76L83 1435 aa22.91■■□□□ 1.26
GARNL3-206ENST00000439286 UGGT2Q9NYU1 1516 aa22.91■■□□□ 1.26
GARNL3-206ENST00000439286 GOLGA3Q08378 1498 aa22.83■■□□□ 1.25
GARNL3-206ENST00000439286 KDM6BO15054 1643 aa22.82■■□□□ 1.24
GARNL3-206ENST00000439286 KIAA0556O60303 1618 aa22.8■■□□□ 1.24
GARNL3-206ENST00000439286 KDM5BQ9UGL1 1544 aa22.8■■□□□ 1.24
GARNL3-206ENST00000439286 PRXQ9BXM0 1461 aa22.79■■□□□ 1.24
GARNL3-206ENST00000439286 CSRNP3Q8WYN3 585 aa22.78■■□□□ 1.24
GARNL3-206ENST00000439286 GLI2P10070 1586 aa22.76■■□□□ 1.23
GARNL3-206ENST00000439286 EPRSP07814 1512 aaKnown RBP22.74■■□□□ 1.23
GARNL3-206ENST00000439286 TSPOAP1O95153 1857 aa22.72■■□□□ 1.23
GARNL3-206ENST00000439286 P3H3Q8IVL6 736 aa22.71■■□□□ 1.23
GARNL3-206ENST00000439286 KCNH8Q96L42 1107 aa22.71■■□□□ 1.23
GARNL3-206ENST00000439286 TEX14Q8IWB6 1497 aa22.69■■□□□ 1.22
GARNL3-206ENST00000439286 WDR7Q9Y4E6 1490 aa22.68■■□□□ 1.22
GARNL3-206ENST00000439286 KDM4FA0A1W2PPD8 638 aa22.67■■□□□ 1.22
GARNL3-206ENST00000439286 ZCCHC11Q5TAX3 1644 aaKnown RBP22.66■■□□□ 1.22
GARNL3-206ENST00000439286 CTTNBP2Q8WZ74 1663 aa22.65■■□□□ 1.22
GARNL3-206ENST00000439286 ARID3CA6NKF2 412 aa22.63■■□□□ 1.21
GARNL3-206ENST00000439286 EEA1Q15075 1411 aa22.63■■□□□ 1.21
GARNL3-206ENST00000439286 ABCA8O94911 1581 aa22.6■■□□□ 1.21
GARNL3-206ENST00000439286 CD109Q6YHK3 1445 aa22.6■■□□□ 1.21
GARNL3-206ENST00000439286 RANGAP1P46060 587 aaPredicted RBP22.6■■□□□ 1.21
GARNL3-206ENST00000439286 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.59■■□□□ 1.21
GARNL3-206ENST00000439286 HNRNPUL2Q1KMD3 747 aaKnown RBP22.59■■□□□ 1.21
GARNL3-206ENST00000439286 MAP3K4Q9Y6R4 1608 aa22.57■■□□□ 1.2
GARNL3-206ENST00000439286 COL17A1Q9UMD9 1497 aaPredicted RBP22.56■■□□□ 1.2
GARNL3-206ENST00000439286 PPRC1Q5VV67 1664 aaKnown RBP22.55■■□□□ 1.2
GARNL3-206ENST00000439286 MAGI3Q5TCQ9 1506 aa22.52■■□□□ 1.19
GARNL3-206ENST00000439286 ATP10BO94823 1461 aa22.5■■□□□ 1.19
GARNL3-206ENST00000439286 ADGRL1O94910 1474 aa22.44■■□□□ 1.18
GARNL3-206ENST00000439286 PLEKHD1A6NEE1 506 aa22.42■■□□□ 1.18
GARNL3-206ENST00000439286 SAMD9Q5K651 1589 aa22.42■■□□□ 1.18
GARNL3-206ENST00000439286 UBTFP17480 764 aaKnown RBP22.41■■□□□ 1.18
GARNL3-206ENST00000439286 CFAP43Q8NDM7 1665 aa22.41■■□□□ 1.18
GARNL3-206ENST00000439286 FHOD3Q2V2M9 1422 aa22.4■■□□□ 1.18
GARNL3-206ENST00000439286 PHLDB1Q86UU1 1377 aa22.4■■□□□ 1.18
GARNL3-206ENST00000439286 EHMT2Q96KQ7 1210 aa22.39■■□□□ 1.17
GARNL3-206ENST00000439286 RAPGEF6Q8TEU7 1601 aa22.36■■□□□ 1.17
GARNL3-206ENST00000439286 CHIC1Q5VXU3 224 aa22.33■■□□□ 1.17
GARNL3-206ENST00000439286 NUP153P49790 1475 aaKnown RBP22.33■■□□□ 1.16
GARNL3-206ENST00000439286 ARAP3Q8WWN8 1544 aa22.32■■□□□ 1.16
GARNL3-206ENST00000439286 RAPGEF3O95398 923 aa22.31■■□□□ 1.16
GARNL3-206ENST00000439286 ATP1B4Q9UN42 357 aaPredicted RBP22.31■■□□□ 1.16
GARNL3-206ENST00000439286 EFCAB5A4FU69 1503 aa22.29■■□□□ 1.16
GARNL3-206ENST00000439286 KIF21BO75037 1637 aa22.28■■□□□ 1.16
GARNL3-206ENST00000439286 NEO1Q92859 1461 aa22.28■■□□□ 1.16
GARNL3-206ENST00000439286 ABCA9Q8IUA7 1624 aa22.27■■□□□ 1.16
GARNL3-206ENST00000439286 ARID4BQ4LE39 1312 aaPredicted RBP22.23■■□□□ 1.15
GARNL3-206ENST00000439286 CDK11AQ9UQ88 783 aaPredicted RBP22.22■■□□□ 1.15
GARNL3-206ENST00000439286 FMN1Q68DA7 1419 aa22.2■■□□□ 1.14
GARNL3-206ENST00000439286 AKNAQ7Z591 1439 aa22.16■■□□□ 1.14
GARNL3-206ENST00000439286 DENND4BO75064 1496 aaPredicted RBP22.15■■□□□ 1.14
GARNL3-206ENST00000439286 FANCAO15360 1455 aa22.14■■□□□ 1.13
GARNL3-206ENST00000439286 CDK13Q14004 1512 aaKnown RBP22.1■■□□□ 1.13
GARNL3-206ENST00000439286 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.1■■□□□ 1.13
GARNL3-206ENST00000439286 ARHGAP35Q9NRY4 1499 aa22.09■■□□□ 1.13
GARNL3-206ENST00000439286 EFCAB2Q5VUJ9 269 aa22.08■■□□□ 1.13
GARNL3-206ENST00000439286 PLCH2O75038 1416 aa22.06■■□□□ 1.12
GARNL3-206ENST00000439286 HECW2Q9P2P5 1572 aa22.06■■□□□ 1.12
GARNL3-206ENST00000439286 CFAP74Q9C0B2 1584 aa22.04■■□□□ 1.12
GARNL3-206ENST00000439286 HECW1Q76N89 1606 aa22.03■■□□□ 1.12
GARNL3-206ENST00000439286 SCAPERQ9BY12 1400 aa22.03■■□□□ 1.12
GARNL3-206ENST00000439286 PTPRMP28827 1452 aa22.03■■□□□ 1.12
GARNL3-206ENST00000439286 CLIP1P30622 1438 aa22.02■■□□□ 1.12
GARNL3-206ENST00000439286 POGZQ7Z3K3 1410 aa22.02■■□□□ 1.12
GARNL3-206ENST00000439286 FRMPD1Q5SYB0 1578 aa22.01■■□□□ 1.11
GARNL3-206ENST00000439286 TTC37Q6PGP7 1564 aa22■■□□□ 1.11
GARNL3-206ENST00000439286 MAGI2Q86UL8 1455 aa21.99■■□□□ 1.11
GARNL3-206ENST00000439286 ILDR1Q86SU0 546 aaPredicted RBP21.99■■□□□ 1.11
GARNL3-206ENST00000439286 MYT1LQ9UL68 1186 aa21.99■■□□□ 1.11
GARNL3-206ENST00000439286 TROQ12816 1431 aaPredicted RBP21.98■■□□□ 1.11
GARNL3-206ENST00000439286 MLECQ14165 292 aa21.96■■□□□ 1.11
GARNL3-206ENST00000439286 PLPPR3Q6T4P5 718 aa21.96■■□□□ 1.11
GARNL3-206ENST00000439286 ZFYVE16Q7Z3T8 1539 aa21.95■■□□□ 1.1
GARNL3-206ENST00000439286 ARHGEF40Q8TER5 1519 aa21.95■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms