RNA–Protein interactions for RNA: ENST00000439220.6

CSK-202, Transcript of C-terminal Src kinase, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CSK, Length 1,900 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSK-202ENST00000439220 NUP160Q12769 1436 aa29.12■■■□□ 2.25
CSK-202ENST00000439220 CLASP1Q7Z460 1538 aa29.1■■■□□ 2.25
CSK-202ENST00000439220 CEP170Q5SW79 1584 aa29.07■■■□□ 2.24
CSK-202ENST00000439220 TNIKQ9UKE5 1360 aa29.06■■■□□ 2.24
CSK-202ENST00000439220 KIAA0586Q9BVV6 1533 aa28.9■■■□□ 2.22
CSK-202ENST00000439220 ARHGEF11O15085 1522 aa28.88■■■□□ 2.21
CSK-202ENST00000439220 SHROOM2Q13796 1616 aa28.86■■■□□ 2.21
CSK-202ENST00000439220 CEP162Q5TB80 1403 aa28.85■■■□□ 2.21
CSK-202ENST00000439220 CTTNBP2Q8WZ74 1663 aa28.85■■■□□ 2.21
CSK-202ENST00000439220 RIMBP3CA6NJZ7 1639 aa28.85■■■□□ 2.21
CSK-202ENST00000439220 RIMBP3BA6NNM3 1639 aa28.85■■■□□ 2.21
CSK-202ENST00000439220 RIMBP3Q9UFD9 1639 aa28.85■■■□□ 2.21
CSK-202ENST00000439220 RANGAP1P46060 587 aaPredicted RBP28.82■■■□□ 2.2
CSK-202ENST00000439220 JPH4Q96JJ6 628 aa28.81■■■□□ 2.2
CSK-202ENST00000439220 IQGAP2Q13576 1575 aa28.78■■■□□ 2.2
CSK-202ENST00000439220 CLIP1P30622 1438 aa28.75■■■□□ 2.19
CSK-202ENST00000439220 PRG4Q92954 1404 aaPredicted RBP28.71■■■□□ 2.19
CSK-202ENST00000439220 ERCC6L2Q5T890 1561 aa28.7■■■□□ 2.19
CSK-202ENST00000439220 ARAP1Q96P48 1450 aa28.68■■■□□ 2.18
CSK-202ENST00000439220 ARHGAP35Q9NRY4 1499 aa28.63■■■□□ 2.17
CSK-202ENST00000439220 UGGT2Q9NYU1 1516 aa28.63■■■□□ 2.17
CSK-202ENST00000439220 CYB5RLQ6IPT4 315 aa28.59■■■□□ 2.17
CSK-202ENST00000439220 DISP1Q96F81 1524 aa28.57■■■□□ 2.16
CSK-202ENST00000439220 P3H3Q8IVL6 736 aa28.57■■■□□ 2.16
CSK-202ENST00000439220 CARMIL2Q6F5E8 1435 aa28.55■■■□□ 2.16
CSK-202ENST00000439220 EFCAB5A4FU69 1503 aa28.52■■■□□ 2.16
CSK-202ENST00000439220 KIAA0556O60303 1618 aa28.51■■■□□ 2.16
CSK-202ENST00000439220 SAMD9Q5K651 1589 aa28.5■■■□□ 2.15
CSK-202ENST00000439220 TTBK1Q5TCY1 1321 aaPredicted RBP28.48■■■□□ 2.15
CSK-202ENST00000439220 FHOD3Q2V2M9 1422 aa28.48■■■□□ 2.15
CSK-202ENST00000439220 VPS8Q8N3P4 1428 aa28.42■■■□□ 2.14
CSK-202ENST00000439220 PTPRGP23470 1445 aa28.4■■■□□ 2.14
CSK-202ENST00000439220 FMN1Q68DA7 1419 aa28.29■■■□□ 2.12
CSK-202ENST00000439220 ADCY10Q96PN6 1610 aa28.24■■■□□ 2.11
CSK-202ENST00000439220 UACAQ9BZF9 1416 aa28.23■■■□□ 2.11
CSK-202ENST00000439220 PLB1Q6P1J6 1458 aa28.23■■■□□ 2.11
CSK-202ENST00000439220 UHRF1BP1LA0JNW5 1464 aa28.22■■■□□ 2.11
CSK-202ENST00000439220 CASKIN1Q8WXD9 1431 aa28.2■■■□□ 2.11
CSK-202ENST00000439220 PCF11O94913 1555 aaKnown RBP28.18■■■□□ 2.1
CSK-202ENST00000439220 ABCC2Q92887 1545 aa28.18■■■□□ 2.1
CSK-202ENST00000439220 ABCA8O94911 1581 aa28.17■■■□□ 2.1
CSK-202ENST00000439220 ATP1B4Q9UN42 357 aaPredicted RBP28.16■■■□□ 2.1
CSK-202ENST00000439220 FYCO1Q9BQS8 1478 aa28.15■■■□□ 2.1
CSK-202ENST00000439220 RAPGEF6Q8TEU7 1601 aa28.13■■■□□ 2.09
CSK-202ENST00000439220 ARID3CA6NKF2 412 aa28.11■■■□□ 2.09
CSK-202ENST00000439220 NPM1P06748 294 aaKnown RBP eCLIP28.11■■■□□ 2.09
CSK-202ENST00000439220 PPARGC1BQ86YN6 1023 aaKnown RBP28.1■■■□□ 2.09
CSK-202ENST00000439220 APLP2Q06481 763 aa28.09■■■□□ 2.09
CSK-202ENST00000439220 KDM5BQ9UGL1 1544 aa28.08■■■□□ 2.09
CSK-202ENST00000439220 NUP153P49790 1475 aaKnown RBP28.05■■■□□ 2.08
CSK-202ENST00000439220 MAPKBP1O60336 1514 aa28.04■■■□□ 2.08
CSK-202ENST00000439220 KANK4Q5T7N3 995 aaPredicted RBP28■■■□□ 2.07
CSK-202ENST00000439220 HECW1Q76N89 1606 aa28■■■□□ 2.07
CSK-202ENST00000439220 LRRIQ1Q96JM4 1722 aa27.99■■■□□ 2.07
CSK-202ENST00000439220 MAP3K1Q13233 1512 aa27.99■■■□□ 2.07
CSK-202ENST00000439220 ZCCHC11Q5TAX3 1644 aaKnown RBP27.98■■■□□ 2.07
CSK-202ENST00000439220 EPRSP07814 1512 aaKnown RBP27.98■■■□□ 2.07
CSK-202ENST00000439220 ATP10BO94823 1461 aa27.97■■■□□ 2.07
CSK-202ENST00000439220 TIAM1Q13009 1591 aa27.97■■■□□ 2.07
CSK-202ENST00000439220 CDK13Q14004 1512 aaKnown RBP27.95■■■□□ 2.07
CSK-202ENST00000439220 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.93■■■□□ 2.06
CSK-202ENST00000439220 HNRNPUL2Q1KMD3 747 aaKnown RBP27.93■■■□□ 2.06
CSK-202ENST00000439220 CCDC18Q5T9S5 1454 aa27.93■■■□□ 2.06
CSK-202ENST00000439220 ASXL2Q76L83 1435 aa27.91■■■□□ 2.06
CSK-202ENST00000439220 LRRC9Q6ZRR7 1453 aa27.88■■■□□ 2.05
CSK-202ENST00000439220 CFAP43Q8NDM7 1665 aa27.88■■■□□ 2.05
CSK-202ENST00000439220 TRHP20396 242 aaPredicted RBP27.88■■■□□ 2.05
CSK-202ENST00000439220 ABCC10Q5T3U5 1492 aa27.87■■■□□ 2.05
CSK-202ENST00000439220 DIP2BQ9P265 1576 aa27.82■■■□□ 2.04
CSK-202ENST00000439220 MAGI3Q5TCQ9 1506 aa27.82■■■□□ 2.04
CSK-202ENST00000439220 WDR7Q9Y4E6 1490 aa27.81■■■□□ 2.04
CSK-202ENST00000439220 MTUS2Q5JR59 1369 aa27.8■■■□□ 2.04
CSK-202ENST00000439220 KIF13AQ9H1H9 1805 aa27.8■■■□□ 2.04
CSK-202ENST00000439220 FAM69CQ0P6D2 419 aa27.77■■■□□ 2.04
CSK-202ENST00000439220 CDK11AQ9UQ88 783 aaPredicted RBP27.77■■■□□ 2.04
CSK-202ENST00000439220 GLI2P10070 1586 aa27.75■■■□□ 2.03
CSK-202ENST00000439220 PLEKHD1A6NEE1 506 aa27.75■■■□□ 2.03
CSK-202ENST00000439220 KCNH8Q96L42 1107 aa27.73■■■□□ 2.03
CSK-202ENST00000439220 EHBP1L1Q8N3D4 1523 aa27.71■■■□□ 2.03
CSK-202ENST00000439220 TROQ12816 1431 aaPredicted RBP27.69■■■□□ 2.02
CSK-202ENST00000439220 PHLDB1Q86UU1 1377 aa27.64■■■□□ 2.01
CSK-202ENST00000439220 NCOA2Q15596 1464 aa27.64■■■□□ 2.01
CSK-202ENST00000439220 TRIM26Q12899 539 aaPredicted RBP27.63■■■□□ 2.01
CSK-202ENST00000439220 KIF14Q15058 1648 aa27.62■■■□□ 2.01
CSK-202ENST00000439220 MAP3K4Q9Y6R4 1608 aa27.61■■■□□ 2.01
CSK-202ENST00000439220 SUPT6HQ7KZ85 1726 aaKnown RBP27.57■■■□□ 2
CSK-202ENST00000439220 ABCA9Q8IUA7 1624 aa27.57■■■□□ 2
CSK-202ENST00000439220 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.54■■■□□ 2
CSK-202ENST00000439220 CD109Q6YHK3 1445 aa27.53■■■□□ 2
CSK-202ENST00000439220 TTC37Q6PGP7 1564 aa27.53■■■□□ 2
CSK-202ENST00000439220 PPRC1Q5VV67 1664 aaKnown RBP27.52■■■□□ 2
CSK-202ENST00000439220 TSPOAP1O95153 1857 aa27.51■■■□□ 2
CSK-202ENST00000439220 PCGF6Q9BYE7 350 aa27.5■■□□□ 1.99
CSK-202ENST00000439220 RRBP1Q9P2E9 1410 aaKnown RBP27.49■■□□□ 1.99
CSK-202ENST00000439220 MYOM3Q5VTT5 1437 aa27.49■■□□□ 1.99
CSK-202ENST00000439220 CCNB3Q8WWL7 1395 aa27.47■■□□□ 1.99
CSK-202ENST00000439220 TEX14Q8IWB6 1497 aa27.45■■□□□ 1.98
CSK-202ENST00000439220 FGD6Q6ZV73 1430 aa27.44■■□□□ 1.98
CSK-202ENST00000439220 GPATCH8Q9UKJ3 1502 aaKnown RBP27.43■■□□□ 1.98
CSK-202ENST00000439220 CDC42BPAQ5VT25 1732 aa27.39■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms