RNA–Protein interactions for RNA: ENST00000438447.1

PDZD2-202, Transcript of PDZ domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDZD2, Length 11,704 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD2-202ENST00000438447 TIMELESSQ9UNS1 1208 aa9.53□□□□□ -0.88
PDZD2-202ENST00000438447 UPF2Q9HAU5 1272 aaKnown RBP9.52□□□□□ -0.88
PDZD2-202ENST00000438447 PRDM2Q13029 1718 aa9.52□□□□□ -0.88
PDZD2-202ENST00000438447 ARXQ96QS3 562 aa9.52□□□□□ -0.89
PDZD2-202ENST00000438447 KIF21BO75037 1637 aa9.51□□□□□ -0.89
PDZD2-202ENST00000438447 NOP58Q9Y2X3 529 aaKnown RBP9.51□□□□□ -0.89
PDZD2-202ENST00000438447 ESF1Q9H501 851 aaKnown RBP9.5□□□□□ -0.89
PDZD2-202ENST00000438447 DDX10Q13206 875 aaKnown RBP9.5□□□□□ -0.89
PDZD2-202ENST00000438447 TOP2AP11388 1531 aaKnown RBP9.49□□□□□ -0.89
PDZD2-202ENST00000438447 HNRNPUQ00839 825 aaKnown RBP eCLIP9.49□□□□□ -0.89
PDZD2-202ENST00000438447 A0A0G2JS52 829 aa9.48□□□□□ -0.89
PDZD2-202ENST00000438447 RSPH6AQ9H0K4 717 aa9.46□□□□□ -0.9
PDZD2-202ENST00000438447 SMARCA2P51531 1590 aa9.46□□□□□ -0.9
PDZD2-202ENST00000438447 VPS8Q8N3P4 1428 aa9.46□□□□□ -0.9
PDZD2-202ENST00000438447 CCER2I3L3R5 266 aa9.45□□□□□ -0.9
PDZD2-202ENST00000438447 PPM1GO15355 546 aaPredicted RBP9.45□□□□□ -0.9
PDZD2-202ENST00000438447 FAM9BQ8IZU0 186 aa9.45□□□□□ -0.9
PDZD2-202ENST00000438447 CHIC2Q9UKJ5 165 aa9.45□□□□□ -0.9
PDZD2-202ENST00000438447 BECN1Q14457 450 aa9.44□□□□□ -0.9
PDZD2-202ENST00000438447 PKNOX2Q96KN3 472 aa9.44□□□□□ -0.9
PDZD2-202ENST00000438447 CCDC136Q96JN2 1154 aa9.44□□□□□ -0.9
PDZD2-202ENST00000438447 CHGAP10645 457 aaKnown RBP9.44□□□□□ -0.9
PDZD2-202ENST00000438447 FHAD1B1AJZ9 1412 aa9.43□□□□□ -0.9
PDZD2-202ENST00000438447 MTUS2Q5JR59 1369 aa9.43□□□□□ -0.9
PDZD2-202ENST00000438447 ARID4BQ4LE39 1312 aaPredicted RBP9.43□□□□□ -0.9
PDZD2-202ENST00000438447 PLEKHG5O94827 1062 aa9.42□□□□□ -0.9
PDZD2-202ENST00000438447 SMARCA4P51532 1647 aa9.42□□□□□ -0.9
PDZD2-202ENST00000438447 MIER1Q8N108 512 aa9.42□□□□□ -0.9
PDZD2-202ENST00000438447 STAG3Q9UJ98 1225 aa9.41□□□□□ -0.9
PDZD2-202ENST00000438447 MRS2Q9HD23 443 aa9.41□□□□□ -0.9
PDZD2-202ENST00000438447 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.41□□□□□ -0.9
PDZD2-202ENST00000438447 PODXL2Q9NZ53 605 aa9.41□□□□□ -0.9
PDZD2-202ENST00000438447 L1TD1Q5T7N2 865 aaKnown RBP9.4□□□□□ -0.9
PDZD2-202ENST00000438447 WIZO95785 1651 aa9.4□□□□□ -0.9
PDZD2-202ENST00000438447 SENP3Q9H4L4 574 aaPredicted RBP9.39□□□□□ -0.91
PDZD2-202ENST00000438447 SUPT16HQ9Y5B9 1047 aaKnown RBP9.39□□□□□ -0.91
PDZD2-202ENST00000438447 USP35Q9P2H5 1018 aa9.38□□□□□ -0.91
PDZD2-202ENST00000438447 UNC13AQ9UPW8 1703 aa9.38□□□□□ -0.91
PDZD2-202ENST00000438447 AMER1Q5JTC6 1135 aaPredicted RBP9.38□□□□□ -0.91
PDZD2-202ENST00000438447 PTMAP06454 111 aaKnown RBP9.38□□□□□ -0.91
PDZD2-202ENST00000438447 TMC1Q8TDI8 760 aa9.38□□□□□ -0.91
PDZD2-202ENST00000438447 LAS1LQ9Y4W2 734 aaKnown RBP9.38□□□□□ -0.91
PDZD2-202ENST00000438447 PTMSP20962 102 aa9.37□□□□□ -0.91
PDZD2-202ENST00000438447 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.37□□□□□ -0.91
PDZD2-202ENST00000438447 KDM2AQ9Y2K7 1162 aa9.37□□□□□ -0.91
PDZD2-202ENST00000438447 HSP90AA2PQ14568 343 aaPredicted RBP9.36□□□□□ -0.91
PDZD2-202ENST00000438447 PPP4R2Q9NY27 417 aa9.36□□□□□ -0.91
PDZD2-202ENST00000438447 RRP7BPQ9NSQ0 103 aa9.36□□□□□ -0.91
PDZD2-202ENST00000438447 WDR43Q15061 677 aaKnown RBP eCLIP9.35□□□□□ -0.91
PDZD2-202ENST00000438447 SALL2Q9Y467 1007 aaPredicted RBP9.35□□□□□ -0.91
PDZD2-202ENST00000438447 ERICH3Q5RHP9 1530 aa9.35□□□□□ -0.91
PDZD2-202ENST00000438447 KIF27Q86VH2 1401 aa9.35□□□□□ -0.91
PDZD2-202ENST00000438447 GOLGA6L22H0YM25 854 aa9.35□□□□□ -0.91
PDZD2-202ENST00000438447 NPM1P06748 294 aaKnown RBP eCLIP9.35□□□□□ -0.91
PDZD2-202ENST00000438447 TSPY4P0CV99 314 aa9.34□□□□□ -0.91
PDZD2-202ENST00000438447 TSPY10P0CW01 314 aa9.34□□□□□ -0.91
PDZD2-202ENST00000438447 IRX6P78412 446 aaPredicted RBP9.34□□□□□ -0.91
PDZD2-202ENST00000438447 CHAF1AQ13111 956 aaPredicted RBP9.34□□□□□ -0.91
PDZD2-202ENST00000438447 FANCIQ9NVI1 1328 aa9.33□□□□□ -0.92
PDZD2-202ENST00000438447 CCNB3Q8WWL7 1395 aa9.33□□□□□ -0.92
PDZD2-202ENST00000438447 DNTTIP2Q5QJE6 756 aaKnown RBP9.32□□□□□ -0.92
PDZD2-202ENST00000438447 VSIG10Q8N0Z9 540 aa9.32□□□□□ -0.92
PDZD2-202ENST00000438447 PNNQ9H307 717 aaKnown RBP9.32□□□□□ -0.92
PDZD2-202ENST00000438447 A0A0U1RQG5 324 aaPredicted RBP9.32□□□□□ -0.92
PDZD2-202ENST00000438447 HIRIP3Q9BW71 556 aaPredicted RBP9.32□□□□□ -0.92
PDZD2-202ENST00000438447 EIF4G2P78344 907 aaKnown RBP eCLIP9.31□□□□□ -0.92
PDZD2-202ENST00000438447 CHMP7Q8WUX9 453 aaPredicted RBP9.31□□□□□ -0.92
PDZD2-202ENST00000438447 KIF21AQ7Z4S6 1674 aa9.3□□□□□ -0.92
PDZD2-202ENST00000438447 ZBTB7CA1YPR0 619 aa9.3□□□□□ -0.92
PDZD2-202ENST00000438447 TNNT3P45378 269 aaPredicted RBP9.29□□□□□ -0.92
PDZD2-202ENST00000438447 CUX1P39880 1505 aa9.28□□□□□ -0.92
PDZD2-202ENST00000438447 MYH16Q9H6N6 1097 aa9.28□□□□□ -0.92
PDZD2-202ENST00000438447 POLR1AO95602 1720 aaPredicted RBP9.28□□□□□ -0.92
PDZD2-202ENST00000438447 MSNP26038 577 aaKnown RBP9.26□□□□□ -0.93
PDZD2-202ENST00000438447 ARHGAP35Q9NRY4 1499 aa9.26□□□□□ -0.93
PDZD2-202ENST00000438447 C14orf37Q86TY3 774 aa9.26□□□□□ -0.93
PDZD2-202ENST00000438447 RBM19Q9Y4C8 960 aaKnown RBP9.26□□□□□ -0.93
PDZD2-202ENST00000438447 SETD5Q9C0A6 1442 aa9.25□□□□□ -0.93
PDZD2-202ENST00000438447 PLEKHD1A6NEE1 506 aa9.24□□□□□ -0.93
PDZD2-202ENST00000438447 ROCK2O75116 1388 aaKnown RBP9.24□□□□□ -0.93
PDZD2-202ENST00000438447 PHLDB1Q86UU1 1377 aa9.23□□□□□ -0.93
PDZD2-202ENST00000438447 ABCC8Q09428 1581 aa9.22□□□□□ -0.93
PDZD2-202ENST00000438447 PPP1R15AO75807 674 aaPredicted RBP9.22□□□□□ -0.93
PDZD2-202ENST00000438447 SUPT6HQ7KZ85 1726 aaKnown RBP9.22□□□□□ -0.93
PDZD2-202ENST00000438447 CALRP27797 417 aaKnown RBP9.22□□□□□ -0.93
PDZD2-202ENST00000438447 KCNH8Q96L42 1107 aa9.21□□□□□ -0.93
PDZD2-202ENST00000438447 CFDP1Q9UEE9 299 aaPredicted RBP9.21□□□□□ -0.94
PDZD2-202ENST00000438447 ARID3AQ99856 593 aa9.21□□□□□ -0.94
PDZD2-202ENST00000438447 GOLGA6L6A8MZA4 724 aa9.2□□□□□ -0.94
PDZD2-202ENST00000438447 MROH2BQ7Z745 1585 aa9.19□□□□□ -0.94
PDZD2-202ENST00000438447 CDCA8Q53HL2 280 aa9.19□□□□□ -0.94
PDZD2-202ENST00000438447 TSHZ2Q9NRE2 1034 aa9.19□□□□□ -0.94
PDZD2-202ENST00000438447 CFAP53Q96M91 514 aa9.19□□□□□ -0.94
PDZD2-202ENST00000438447 RGL3Q3MIN7 710 aa9.19□□□□□ -0.94
PDZD2-202ENST00000438447 FMN1Q68DA7 1419 aa9.18□□□□□ -0.94
PDZD2-202ENST00000438447 KNSTRNQ9Y448 316 aa9.18□□□□□ -0.94
PDZD2-202ENST00000438447 EIF4G1Q04637 1599 aaKnown RBP9.18□□□□□ -0.94
PDZD2-202ENST00000438447 SENP3-EIF4A1A0A087X0R7 540 aa9.18□□□□□ -0.94
PDZD2-202ENST00000438447 CFAP44Q96MT7 982 aa9.17□□□□□ -0.94
PDZD2-202ENST00000438447 TCERG1O14776 1098 aaKnown RBP9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms