RNA–Protein interactions for RNA: ENST00000438347.1

CCND3P1-201, Transcript of cyclin D3 pseudogene 1, humanhuman

BASIC

Gene CCND3P1, Length 580 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND3P1-201ENST00000438347 ERCC6L2Q5T890 1561 aa22.42■■□□□ 1.18
CCND3P1-201ENST00000438347 KIAA0586Q9BVV6 1533 aa22.41■■□□□ 1.18
CCND3P1-201ENST00000438347 PRG4Q92954 1404 aaPredicted RBP22.39■■□□□ 1.17
CCND3P1-201ENST00000438347 TRHP20396 242 aaPredicted RBP22.37■■□□□ 1.17
CCND3P1-201ENST00000438347 RAPGEF2Q9Y4G8 1499 aa22.34■■□□□ 1.17
CCND3P1-201ENST00000438347 PRXQ9BXM0 1461 aa22.27■■□□□ 1.16
CCND3P1-201ENST00000438347 CHIC1Q5VXU3 224 aa22.22■■□□□ 1.15
CCND3P1-201ENST00000438347 CSRNP3Q8WYN3 585 aa22.21■■□□□ 1.15
CCND3P1-201ENST00000438347 IQGAP2Q13576 1575 aa22.2■■□□□ 1.14
CCND3P1-201ENST00000438347 EEA1Q15075 1411 aa22.18■■□□□ 1.14
CCND3P1-201ENST00000438347 CARMIL2Q6F5E8 1435 aa22.16■■□□□ 1.14
CCND3P1-201ENST00000438347 UGGT2Q9NYU1 1516 aa22.13■■□□□ 1.13
CCND3P1-201ENST00000438347 PTPRGP23470 1445 aa22.12■■□□□ 1.13
CCND3P1-201ENST00000438347 TNIKQ9UKE5 1360 aa22.12■■□□□ 1.13
CCND3P1-201ENST00000438347 DISP1Q96F81 1524 aa22.11■■□□□ 1.13
CCND3P1-201ENST00000438347 FAM9AQ8IZU1 332 aaPredicted RBP22.04■■□□□ 1.12
CCND3P1-201ENST00000438347 NPM1P06748 294 aaKnown RBP eCLIP22.02■■□□□ 1.12
CCND3P1-201ENST00000438347 ADCY10Q96PN6 1610 aa22.02■■□□□ 1.11
CCND3P1-201ENST00000438347 TTBK1Q5TCY1 1321 aaPredicted RBP22.01■■□□□ 1.11
CCND3P1-201ENST00000438347 KIAA0556O60303 1618 aa21.98■■□□□ 1.11
CCND3P1-201ENST00000438347 CTTNBP2Q8WZ74 1663 aa21.98■■□□□ 1.11
CCND3P1-201ENST00000438347 GOLGA3Q08378 1498 aa21.97■■□□□ 1.11
CCND3P1-201ENST00000438347 UACAQ9BZF9 1416 aa21.96■■□□□ 1.11
CCND3P1-201ENST00000438347 UHRF1BP1LA0JNW5 1464 aa21.96■■□□□ 1.11
CCND3P1-201ENST00000438347 MAPKBP1O60336 1514 aa21.94■■□□□ 1.1
CCND3P1-201ENST00000438347 ABCC2Q92887 1545 aa21.93■■□□□ 1.1
CCND3P1-201ENST00000438347 KIF21BO75037 1637 aa21.9■■□□□ 1.1
CCND3P1-201ENST00000438347 ABCC10Q5T3U5 1492 aa21.88■■□□□ 1.09
CCND3P1-201ENST00000438347 KDM5BQ9UGL1 1544 aa21.85■■□□□ 1.09
CCND3P1-201ENST00000438347 FAM69CQ0P6D2 419 aa21.84■■□□□ 1.09
CCND3P1-201ENST00000438347 PLB1Q6P1J6 1458 aa21.83■■□□□ 1.09
CCND3P1-201ENST00000438347 P3H3Q8IVL6 736 aa21.82■■□□□ 1.08
CCND3P1-201ENST00000438347 SAMD9Q5K651 1589 aa21.81■■□□□ 1.08
CCND3P1-201ENST00000438347 ASXL2Q76L83 1435 aa21.8■■□□□ 1.08
CCND3P1-201ENST00000438347 ABCA8O94911 1581 aa21.79■■□□□ 1.08
CCND3P1-201ENST00000438347 DIP2BQ9P265 1576 aa21.78■■□□□ 1.08
CCND3P1-201ENST00000438347 AEBP2Q6ZN18 517 aaPredicted RBP21.77■■□□□ 1.08
CCND3P1-201ENST00000438347 KIF13AQ9H1H9 1805 aa21.76■■□□□ 1.07
CCND3P1-201ENST00000438347 UBTFP17480 764 aaKnown RBP21.76■■□□□ 1.07
CCND3P1-201ENST00000438347 RANGAP1P46060 587 aaPredicted RBP21.74■■□□□ 1.07
CCND3P1-201ENST00000438347 EHMT2Q96KQ7 1210 aa21.73■■□□□ 1.07
CCND3P1-201ENST00000438347 ZCCHC11Q5TAX3 1644 aaKnown RBP21.7■■□□□ 1.06
CCND3P1-201ENST00000438347 FHOD3Q2V2M9 1422 aa21.7■■□□□ 1.06
CCND3P1-201ENST00000438347 EFCAB5A4FU69 1503 aa21.69■■□□□ 1.06
CCND3P1-201ENST00000438347 GLI2P10070 1586 aa21.67■■□□□ 1.06
CCND3P1-201ENST00000438347 EPRSP07814 1512 aaKnown RBP21.67■■□□□ 1.06
CCND3P1-201ENST00000438347 ATP10BO94823 1461 aa21.65■■□□□ 1.06
CCND3P1-201ENST00000438347 WDR7Q9Y4E6 1490 aa21.65■■□□□ 1.06
CCND3P1-201ENST00000438347 ARHGAP35Q9NRY4 1499 aa21.6■■□□□ 1.05
CCND3P1-201ENST00000438347 ARID3CA6NKF2 412 aa21.6■■□□□ 1.05
CCND3P1-201ENST00000438347 NUP153P49790 1475 aaKnown RBP21.59■■□□□ 1.05
CCND3P1-201ENST00000438347 RAPGEF6Q8TEU7 1601 aa21.59■■□□□ 1.05
CCND3P1-201ENST00000438347 KCNH8Q96L42 1107 aa21.55■■□□□ 1.04
CCND3P1-201ENST00000438347 FMN1Q68DA7 1419 aa21.53■■□□□ 1.04
CCND3P1-201ENST00000438347 MAP3K4Q9Y6R4 1608 aa21.52■■□□□ 1.04
CCND3P1-201ENST00000438347 CD109Q6YHK3 1445 aa21.49■■□□□ 1.03
CCND3P1-201ENST00000438347 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.49■■□□□ 1.03
CCND3P1-201ENST00000438347 HNRNPUL2Q1KMD3 747 aaKnown RBP21.49■■□□□ 1.03
CCND3P1-201ENST00000438347 PPRC1Q5VV67 1664 aaKnown RBP21.49■■□□□ 1.03
CCND3P1-201ENST00000438347 TSPOAP1O95153 1857 aa21.48■■□□□ 1.03
CCND3P1-201ENST00000438347 TEX14Q8IWB6 1497 aa21.47■■□□□ 1.03
CCND3P1-201ENST00000438347 MAGI3Q5TCQ9 1506 aa21.46■■□□□ 1.03
CCND3P1-201ENST00000438347 KDM6BO15054 1643 aa21.44■■□□□ 1.02
CCND3P1-201ENST00000438347 PLEKHD1A6NEE1 506 aa21.44■■□□□ 1.02
CCND3P1-201ENST00000438347 COL17A1Q9UMD9 1497 aaPredicted RBP21.42■■□□□ 1.02
CCND3P1-201ENST00000438347 CLIP1P30622 1438 aa21.41■■□□□ 1.02
CCND3P1-201ENST00000438347 CFAP43Q8NDM7 1665 aa21.4■■□□□ 1.02
CCND3P1-201ENST00000438347 CDK13Q14004 1512 aaKnown RBP21.39■■□□□ 1.01
CCND3P1-201ENST00000438347 ABCA9Q8IUA7 1624 aa21.38■■□□□ 1.01
CCND3P1-201ENST00000438347 ATP1B4Q9UN42 357 aaPredicted RBP21.38■■□□□ 1.01
CCND3P1-201ENST00000438347 HECW1Q76N89 1606 aa21.37■■□□□ 1.01
CCND3P1-201ENST00000438347 CASKIN1Q8WXD9 1431 aa21.36■■□□□ 1.01
CCND3P1-201ENST00000438347 CDK11AQ9UQ88 783 aaPredicted RBP21.32■■□□□ 1
CCND3P1-201ENST00000438347 PHLDB1Q86UU1 1377 aa21.31■■□□□ 1
CCND3P1-201ENST00000438347 LOC105371045A0A1W2PR82 267 aa21.29■■□□□ 1
CCND3P1-201ENST00000438347 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.28■■□□□ 1
CCND3P1-201ENST00000438347 ARAP3Q8WWN8 1544 aa21.28■■□□□ 1
CCND3P1-201ENST00000438347 CEP162Q5TB80 1403 aa21.28■■□□□ 1
CCND3P1-201ENST00000438347 PCF11O94913 1555 aaKnown RBP21.27■□□□□ 0.99
CCND3P1-201ENST00000438347 NEO1Q92859 1461 aa21.26■□□□□ 0.99
CCND3P1-201ENST00000438347 FYCO1Q9BQS8 1478 aa21.26■□□□□ 0.99
CCND3P1-201ENST00000438347 TROQ12816 1431 aaPredicted RBP21.26■□□□□ 0.99
CCND3P1-201ENST00000438347 CCDC18Q5T9S5 1454 aa21.25■□□□□ 0.99
CCND3P1-201ENST00000438347 TTC37Q6PGP7 1564 aa21.21■□□□□ 0.99
CCND3P1-201ENST00000438347 PLCH2O75038 1416 aa21.21■□□□□ 0.99
CCND3P1-201ENST00000438347 LRRIQ1Q96JM4 1722 aa21.19■□□□□ 0.98
CCND3P1-201ENST00000438347 FANCAO15360 1455 aa21.19■□□□□ 0.98
CCND3P1-201ENST00000438347 KDM4FA0A1W2PPD8 638 aa21.18■□□□□ 0.98
CCND3P1-201ENST00000438347 RAPGEF3O95398 923 aa21.17■□□□□ 0.98
CCND3P1-201ENST00000438347 AKNAQ7Z591 1439 aa21.17■□□□□ 0.98
CCND3P1-201ENST00000438347 KIF14Q15058 1648 aa21.15■□□□□ 0.98
CCND3P1-201ENST00000438347 EFCAB2Q5VUJ9 269 aa21.12■□□□□ 0.97
CCND3P1-201ENST00000438347 DENND4BO75064 1496 aaPredicted RBP21.11■□□□□ 0.97
CCND3P1-201ENST00000438347 CFAP74Q9C0B2 1584 aa21.1■□□□□ 0.97
CCND3P1-201ENST00000438347 FRMPD1Q5SYB0 1578 aa21.08■□□□□ 0.97
CCND3P1-201ENST00000438347 SCAPERQ9BY12 1400 aa21.06■□□□□ 0.96
CCND3P1-201ENST00000438347 ADGRL1O94910 1474 aa21.06■□□□□ 0.96
CCND3P1-201ENST00000438347 VPS8Q8N3P4 1428 aa21.04■□□□□ 0.96
CCND3P1-201ENST00000438347 MTUS2Q5JR59 1369 aa21.03■□□□□ 0.96
CCND3P1-201ENST00000438347 MYO5CQ9NQX4 1742 aa21.03■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms