RNA–Protein interactions for RNA: ENST00000438045.5

PEX1-204, Transcript of peroxisomal biogenesis factor 1, humanhuman

TSL 2 BASIC

Gene PEX1, Length 3,329 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PEX1-204ENST00000438045 VPS8Q8N3P4 1428 aa20.34■□□□□ 0.85
PEX1-204ENST00000438045 ARHGAP35Q9NRY4 1499 aa20.28■□□□□ 0.84
PEX1-204ENST00000438045 ERICH3Q5RHP9 1530 aa20.25■□□□□ 0.83
PEX1-204ENST00000438045 FAM50AQ14320 339 aaKnown RBP20.24■□□□□ 0.83
PEX1-204ENST00000438045 SNAPC4Q5SXM2 1469 aa20.15■□□□□ 0.82
PEX1-204ENST00000438045 TARBP1Q13395 1621 aaKnown RBP20.11■□□□□ 0.81
PEX1-204ENST00000438045 IFT140Q96RY7 1462 aa20.1■□□□□ 0.81
PEX1-204ENST00000438045 GRIN2BQ13224 1484 aa20.09■□□□□ 0.81
PEX1-204ENST00000438045 ABCA5Q8WWZ7 1642 aa20.05■□□□□ 0.8
PEX1-204ENST00000438045 FHAD1B1AJZ9 1412 aa20.05■□□□□ 0.8
PEX1-204ENST00000438045 WDR62O43379 1518 aa20.05■□□□□ 0.8
PEX1-204ENST00000438045 MTUS2Q5JR59 1369 aa19.98■□□□□ 0.79
PEX1-204ENST00000438045 EIF4G3O43432 1585 aaKnown RBP19.98■□□□□ 0.79
PEX1-204ENST00000438045 WDR97A6NE52 1622 aa19.98■□□□□ 0.79
PEX1-204ENST00000438045 JPH4Q96JJ6 628 aa19.97■□□□□ 0.79
PEX1-204ENST00000438045 THOC2Q8NI27 1593 aaKnown RBP19.97■□□□□ 0.79
PEX1-204ENST00000438045 CUL7Q14999 1698 aa19.96■□□□□ 0.79
PEX1-204ENST00000438045 CHIC2Q9UKJ5 165 aa19.96■□□□□ 0.79
PEX1-204ENST00000438045 PBRM1Q86U86 1689 aa19.92■□□□□ 0.78
PEX1-204ENST00000438045 PCF11O94913 1555 aaKnown RBP19.92■□□□□ 0.78
PEX1-204ENST00000438045 ZNF777Q9ULD5 760 aaPredicted RBP19.92■□□□□ 0.78
PEX1-204ENST00000438045 PHLDB1Q86UU1 1377 aa19.91■□□□□ 0.78
PEX1-204ENST00000438045 ADAMTS12P58397 1594 aa19.89■□□□□ 0.77
PEX1-204ENST00000438045 GRIN2AQ12879 1464 aa19.88■□□□□ 0.77
PEX1-204ENST00000438045 CCNB3Q8WWL7 1395 aa19.86■□□□□ 0.77
PEX1-204ENST00000438045 FMN1Q68DA7 1419 aa19.85■□□□□ 0.77
PEX1-204ENST00000438045 ZEB1P37275 1124 aaPredicted RBP19.84■□□□□ 0.77
PEX1-204ENST00000438045 LRRC9Q6ZRR7 1453 aa19.82■□□□□ 0.76
PEX1-204ENST00000438045 IQGAP2Q13576 1575 aa19.82■□□□□ 0.76
PEX1-204ENST00000438045 CTTNBP2Q8WZ74 1663 aa19.82■□□□□ 0.76
PEX1-204ENST00000438045 CDK13Q14004 1512 aaKnown RBP19.8■□□□□ 0.76
PEX1-204ENST00000438045 RRP7BPQ9NSQ0 103 aa19.8■□□□□ 0.76
PEX1-204ENST00000438045 SYNJ2O15056 1496 aa19.8■□□□□ 0.76
PEX1-204ENST00000438045 NEUROD1Q13562 356 aa19.78■□□□□ 0.76
PEX1-204ENST00000438045 KCNH8Q96L42 1107 aa19.78■□□□□ 0.76
PEX1-204ENST00000438045 TIAM1Q13009 1591 aa19.78■□□□□ 0.76
PEX1-204ENST00000438045 CASKIN1Q8WXD9 1431 aa19.78■□□□□ 0.76
PEX1-204ENST00000438045 PLB1Q6P1J6 1458 aa19.75■□□□□ 0.75
PEX1-204ENST00000438045 KIAA0586Q9BVV6 1533 aa19.75■□□□□ 0.75
PEX1-204ENST00000438045 ZNF644Q9H582 1327 aaPredicted RBP19.74■□□□□ 0.75
PEX1-204ENST00000438045 MAGI1Q96QZ7 1491 aaPredicted RBP19.74■□□□□ 0.75
PEX1-204ENST00000438045 EFCAB5A4FU69 1503 aa19.73■□□□□ 0.75
PEX1-204ENST00000438045 CEP170Q5SW79 1584 aa19.72■□□□□ 0.75
PEX1-204ENST00000438045 PRG4Q92954 1404 aaPredicted RBP19.71■□□□□ 0.75
PEX1-204ENST00000438045 FYCO1Q9BQS8 1478 aa19.7■□□□□ 0.74
PEX1-204ENST00000438045 TRIM52Q96A61 297 aa19.68■□□□□ 0.74
PEX1-204ENST00000438045 DISP1Q96F81 1524 aa19.68■□□□□ 0.74
PEX1-204ENST00000438045 CARMIL2Q6F5E8 1435 aa19.66■□□□□ 0.74
PEX1-204ENST00000438045 SIN3AQ96ST3 1273 aa19.64■□□□□ 0.74
PEX1-204ENST00000438045 CDK11AQ9UQ88 783 aaPredicted RBP19.64■□□□□ 0.74
PEX1-204ENST00000438045 PLEKHD1A6NEE1 506 aa19.63■□□□□ 0.73
PEX1-204ENST00000438045 RAB3GAP2Q9H2M9 1393 aa19.63■□□□□ 0.73
PEX1-204ENST00000438045 NCOA2Q15596 1464 aa19.63■□□□□ 0.73
PEX1-204ENST00000438045 PTPRGP23470 1445 aa19.62■□□□□ 0.73
PEX1-204ENST00000438045 SAMD9Q5K651 1589 aa19.62■□□□□ 0.73
PEX1-204ENST00000438045 EPRSP07814 1512 aaKnown RBP19.61■□□□□ 0.73
PEX1-204ENST00000438045 RRBP1Q9P2E9 1410 aaKnown RBP19.61■□□□□ 0.73
PEX1-204ENST00000438045 CFDP1Q9UEE9 299 aaPredicted RBP19.6■□□□□ 0.73
PEX1-204ENST00000438045 MAGI3Q5TCQ9 1506 aa19.6■□□□□ 0.73
PEX1-204ENST00000438045 FOXD1Q16676 465 aa19.58■□□□□ 0.72
PEX1-204ENST00000438045 KIAA0556O60303 1618 aa19.57■□□□□ 0.72
PEX1-204ENST00000438045 FGD6Q6ZV73 1430 aa19.57■□□□□ 0.72
PEX1-204ENST00000438045 NUP160Q12769 1436 aa19.56■□□□□ 0.72
PEX1-204ENST00000438045 UGGT2Q9NYU1 1516 aa19.55■□□□□ 0.72
PEX1-204ENST00000438045 NUP153P49790 1475 aaKnown RBP19.55■□□□□ 0.72
PEX1-204ENST00000438045 ERCC6L2Q5T890 1561 aa19.54■□□□□ 0.72
PEX1-204ENST00000438045 DHX57Q6P158 1386 aaKnown RBP19.54■□□□□ 0.72
PEX1-204ENST00000438045 MYT1LQ9UL68 1186 aa19.52■□□□□ 0.72
PEX1-204ENST00000438045 HIRIP3Q9BW71 556 aaPredicted RBP19.52■□□□□ 0.72
PEX1-204ENST00000438045 CHD1O14646 1710 aa19.51■□□□□ 0.71
PEX1-204ENST00000438045 LRRIQ1Q96JM4 1722 aa19.51■□□□□ 0.71
PEX1-204ENST00000438045 PTPRKQ15262 1439 aa19.5■□□□□ 0.71
PEX1-204ENST00000438045 HNRNPMP52272 730 aaKnown RBP eCLIP19.5■□□□□ 0.71
PEX1-204ENST00000438045 MYOM3Q5VTT5 1437 aa19.49■□□□□ 0.71
PEX1-204ENST00000438045 SETD5Q9C0A6 1442 aa19.48■□□□□ 0.71
PEX1-204ENST00000438045 HECW1Q76N89 1606 aa19.48■□□□□ 0.71
PEX1-204ENST00000438045 CFAP43Q8NDM7 1665 aa19.47■□□□□ 0.71
PEX1-204ENST00000438045 OSCARQ8IYS5 282 aa19.46■□□□□ 0.71
PEX1-204ENST00000438045 CCDC18Q5T9S5 1454 aa19.44■□□□□ 0.7
PEX1-204ENST00000438045 MAP3K1Q13233 1512 aa19.42■□□□□ 0.7
PEX1-204ENST00000438045 RAPGEF6Q8TEU7 1601 aa19.42■□□□□ 0.7
PEX1-204ENST00000438045 EHBP1L1Q8N3D4 1523 aa19.4■□□□□ 0.7
PEX1-204ENST00000438045 CYB5RLQ6IPT4 315 aa19.4■□□□□ 0.7
PEX1-204ENST00000438045 ATP10BO94823 1461 aa19.39■□□□□ 0.7
PEX1-204ENST00000438045 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.39■□□□□ 0.69
PEX1-204ENST00000438045 DIEXFQ68CQ4 756 aaKnown RBP19.38■□□□□ 0.69
PEX1-204ENST00000438045 ARHGEF11O15085 1522 aa19.38■□□□□ 0.69
PEX1-204ENST00000438045 SUPT6HQ7KZ85 1726 aaKnown RBP19.37■□□□□ 0.69
PEX1-204ENST00000438045 TROQ12816 1431 aaPredicted RBP19.35■□□□□ 0.69
PEX1-204ENST00000438045 ZNF316A6NFI3 1004 aaPredicted RBP19.34■□□□□ 0.69
PEX1-204ENST00000438045 UACAQ9BZF9 1416 aa19.33■□□□□ 0.69
PEX1-204ENST00000438045 ZNF326Q5BKZ1 582 aaKnown RBP19.33■□□□□ 0.68
PEX1-204ENST00000438045 YTHDC1Q96MU7 727 aaKnown RBP19.33■□□□□ 0.68
PEX1-204ENST00000438045 KIF14Q15058 1648 aa19.32■□□□□ 0.68
PEX1-204ENST00000438045 TSPY4P0CV99 314 aa19.31■□□□□ 0.68
PEX1-204ENST00000438045 TSPY10P0CW01 314 aa19.31■□□□□ 0.68
PEX1-204ENST00000438045 PTPN23Q9H3S7 1636 aa19.31■□□□□ 0.68
PEX1-204ENST00000438045 NPM1P06748 294 aaKnown RBP eCLIP19.3■□□□□ 0.68
PEX1-204ENST00000438045 SLC4A1APQ9BWU0 796 aaKnown RBP19.3■□□□□ 0.68
PEX1-204ENST00000438045 NAIPQ13075 1403 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms