RNA–Protein interactions for RNA: ENST00000436654.1

CTDSPL-205, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 804 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-205ENST00000436654 KIF27Q86VH2 1401 aa15.5■□□□□ 0.07
CTDSPL-205ENST00000436654 RUSC2Q8N2Y8 1516 aa15.44■□□□□ 0.06
CTDSPL-205ENST00000436654 CARMIL1Q5VZK9 1371 aa15.4■□□□□ 0.06
CTDSPL-205ENST00000436654 KIAA0586Q9BVV6 1533 aa15.4■□□□□ 0.06
CTDSPL-205ENST00000436654 CUL7Q14999 1698 aa15.38■□□□□ 0.05
CTDSPL-205ENST00000436654 NPM1P06748 294 aaKnown RBP eCLIP15.35■□□□□ 0.05
CTDSPL-205ENST00000436654 TTBK1Q5TCY1 1321 aaPredicted RBP15.34■□□□□ 0.05
CTDSPL-205ENST00000436654 FAM69CQ0P6D2 419 aa15.29■□□□□ 0.04
CTDSPL-205ENST00000436654 PTPRGP23470 1445 aa15.28■□□□□ 0.04
CTDSPL-205ENST00000436654 ADCY10Q96PN6 1610 aa15.28■□□□□ 0.04
CTDSPL-205ENST00000436654 ABCC10Q5T3U5 1492 aa15.26■□□□□ 0.03
CTDSPL-205ENST00000436654 CARMIL2Q6F5E8 1435 aa15.26■□□□□ 0.03
CTDSPL-205ENST00000436654 TNIKQ9UKE5 1360 aa15.24■□□□□ 0.03
CTDSPL-205ENST00000436654 IQGAP2Q13576 1575 aa15.24■□□□□ 0.03
CTDSPL-205ENST00000436654 MAPKBP1O60336 1514 aa15.24■□□□□ 0.03
CTDSPL-205ENST00000436654 RAPGEF2Q9Y4G8 1499 aa15.24■□□□□ 0.03
CTDSPL-205ENST00000436654 ILDR1Q86SU0 546 aaPredicted RBP15.23■□□□□ 0.03
CTDSPL-205ENST00000436654 KIF13AQ9H1H9 1805 aa15.22■□□□□ 0.03
CTDSPL-205ENST00000436654 DISP1Q96F81 1524 aa15.19■□□□□ 0.02
CTDSPL-205ENST00000436654 DIP2BQ9P265 1576 aa15.19■□□□□ 0.02
CTDSPL-205ENST00000436654 ABCC2Q92887 1545 aa15.16■□□□□ 0.02
CTDSPL-205ENST00000436654 UGGT2Q9NYU1 1516 aa15.15■□□□□ 0.02
CTDSPL-205ENST00000436654 UACAQ9BZF9 1416 aa15.15■□□□□ 0.02
CTDSPL-205ENST00000436654 ASXL2Q76L83 1435 aa15.13■□□□□ 0.01
CTDSPL-205ENST00000436654 UHRF1BP1LA0JNW5 1464 aa15.12■□□□□ 0.01
CTDSPL-205ENST00000436654 PLB1Q6P1J6 1458 aa15.1■□□□□ 0.01
CTDSPL-205ENST00000436654 KIAA0556O60303 1618 aa15.1■□□□□ 0.01
CTDSPL-205ENST00000436654 PRXQ9BXM0 1461 aa15.09■□□□□ 0.01
CTDSPL-205ENST00000436654 KDM4FA0A1W2PPD8 638 aa15.09■□□□□ 0.01
CTDSPL-205ENST00000436654 KDM6BO15054 1643 aa15.08■□□□□ 0
CTDSPL-205ENST00000436654 KDM5BQ9UGL1 1544 aa15.06■□□□□ 0
CTDSPL-205ENST00000436654 GOLGA3Q08378 1498 aa15.04■□□□□ -0
CTDSPL-205ENST00000436654 CSRNP3Q8WYN3 585 aa15.03■□□□□ -0
CTDSPL-205ENST00000436654 EPRSP07814 1512 aaKnown RBP15.02■□□□□ -0
CTDSPL-205ENST00000436654 TSPOAP1O95153 1857 aa15.02■□□□□ -0
CTDSPL-205ENST00000436654 GLI2P10070 1586 aa15.02□□□□□ -0.01
CTDSPL-205ENST00000436654 CTTNBP2Q8WZ74 1663 aa15.01□□□□□ -0.01
CTDSPL-205ENST00000436654 P3H3Q8IVL6 736 aa15.01□□□□□ -0.01
CTDSPL-205ENST00000436654 ZCCHC11Q5TAX3 1644 aaKnown RBP15□□□□□ -0.01
CTDSPL-205ENST00000436654 ARID3CA6NKF2 412 aa14.98□□□□□ -0.01
CTDSPL-205ENST00000436654 FAM9AQ8IZU1 332 aaPredicted RBP14.98□□□□□ -0.01
CTDSPL-205ENST00000436654 WDR7Q9Y4E6 1490 aa14.97□□□□□ -0.01
CTDSPL-205ENST00000436654 KCNH8Q96L42 1107 aa14.97□□□□□ -0.01
CTDSPL-205ENST00000436654 ABCA8O94911 1581 aa14.96□□□□□ -0.01
CTDSPL-205ENST00000436654 RANGAP1P46060 587 aaPredicted RBP14.95□□□□□ -0.02
CTDSPL-205ENST00000436654 PPRC1Q5VV67 1664 aaKnown RBP14.95□□□□□ -0.02
CTDSPL-205ENST00000436654 COL17A1Q9UMD9 1497 aaPredicted RBP14.94□□□□□ -0.02
CTDSPL-205ENST00000436654 ADGRL1O94910 1474 aa14.92□□□□□ -0.02
CTDSPL-205ENST00000436654 TEX14Q8IWB6 1497 aa14.92□□□□□ -0.02
CTDSPL-205ENST00000436654 MAP3K4Q9Y6R4 1608 aa14.92□□□□□ -0.02
CTDSPL-205ENST00000436654 EEA1Q15075 1411 aa14.92□□□□□ -0.02
CTDSPL-205ENST00000436654 HECW2Q9P2P5 1572 aa14.9□□□□□ -0.02
CTDSPL-205ENST00000436654 CD109Q6YHK3 1445 aa14.9□□□□□ -0.02
CTDSPL-205ENST00000436654 ATP10BO94823 1461 aa14.88□□□□□ -0.03
CTDSPL-205ENST00000436654 EHMT2Q96KQ7 1210 aa14.86□□□□□ -0.03
CTDSPL-205ENST00000436654 SAMD9Q5K651 1589 aa14.85□□□□□ -0.03
CTDSPL-205ENST00000436654 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.85□□□□□ -0.03
CTDSPL-205ENST00000436654 HNRNPUL2Q1KMD3 747 aaKnown RBP14.85□□□□□ -0.03
CTDSPL-205ENST00000436654 FHOD3Q2V2M9 1422 aa14.84□□□□□ -0.03
CTDSPL-205ENST00000436654 MAGI3Q5TCQ9 1506 aa14.84□□□□□ -0.03
CTDSPL-205ENST00000436654 CHIC1Q5VXU3 224 aa14.81□□□□□ -0.04
CTDSPL-205ENST00000436654 RAPGEF6Q8TEU7 1601 aa14.8□□□□□ -0.04
CTDSPL-205ENST00000436654 CFAP43Q8NDM7 1665 aa14.8□□□□□ -0.04
CTDSPL-205ENST00000436654 NUP153P49790 1475 aaKnown RBP14.79□□□□□ -0.04
CTDSPL-205ENST00000436654 UBTFP17480 764 aaKnown RBP14.77□□□□□ -0.05
CTDSPL-205ENST00000436654 KIF21BO75037 1637 aa14.77□□□□□ -0.05
CTDSPL-205ENST00000436654 FBXO41Q8TF61 875 aa14.75□□□□□ -0.05
CTDSPL-205ENST00000436654 PLEKHD1A6NEE1 506 aa14.73□□□□□ -0.05
CTDSPL-205ENST00000436654 ABCA9Q8IUA7 1624 aa14.73□□□□□ -0.05
CTDSPL-205ENST00000436654 EFCAB5A4FU69 1503 aa14.72□□□□□ -0.05
CTDSPL-205ENST00000436654 ARAP3Q8WWN8 1544 aa14.72□□□□□ -0.05
CTDSPL-205ENST00000436654 RAPGEF3O95398 923 aa14.72□□□□□ -0.05
CTDSPL-205ENST00000436654 ATP1B4Q9UN42 357 aaPredicted RBP14.7□□□□□ -0.06
CTDSPL-205ENST00000436654 PHLDB1Q86UU1 1377 aa14.7□□□□□ -0.06
CTDSPL-205ENST00000436654 NEO1Q92859 1461 aa14.68□□□□□ -0.06
CTDSPL-205ENST00000436654 CDK13Q14004 1512 aaKnown RBP14.66□□□□□ -0.06
CTDSPL-205ENST00000436654 ARHGAP35Q9NRY4 1499 aa14.65□□□□□ -0.06
CTDSPL-205ENST00000436654 FMN1Q68DA7 1419 aa14.63□□□□□ -0.07
CTDSPL-205ENST00000436654 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.62□□□□□ -0.07
CTDSPL-205ENST00000436654 AKNAQ7Z591 1439 aa14.62□□□□□ -0.07
CTDSPL-205ENST00000436654 FANCAO15360 1455 aa14.61□□□□□ -0.07
CTDSPL-205ENST00000436654 ARID4BQ4LE39 1312 aaPredicted RBP14.61□□□□□ -0.07
CTDSPL-205ENST00000436654 FRMPD1Q5SYB0 1578 aa14.6□□□□□ -0.07
CTDSPL-205ENST00000436654 TTC37Q6PGP7 1564 aa14.6□□□□□ -0.07
CTDSPL-205ENST00000436654 DENND4BO75064 1496 aaPredicted RBP14.6□□□□□ -0.07
CTDSPL-205ENST00000436654 HECW1Q76N89 1606 aa14.57□□□□□ -0.08
CTDSPL-205ENST00000436654 CDK11AQ9UQ88 783 aaPredicted RBP14.57□□□□□ -0.08
CTDSPL-205ENST00000436654 LMTK3Q96Q04 1460 aa14.57□□□□□ -0.08
CTDSPL-205ENST00000436654 PLCH2O75038 1416 aa14.55□□□□□ -0.08
CTDSPL-205ENST00000436654 SCAPERQ9BY12 1400 aa14.54□□□□□ -0.08
CTDSPL-205ENST00000436654 CFAP74Q9C0B2 1584 aa14.53□□□□□ -0.08
CTDSPL-205ENST00000436654 ARHGEF40Q8TER5 1519 aa14.53□□□□□ -0.08
CTDSPL-205ENST00000436654 EFCAB2Q5VUJ9 269 aa14.53□□□□□ -0.08
CTDSPL-205ENST00000436654 PTPRMP28827 1452 aa14.52□□□□□ -0.08
CTDSPL-205ENST00000436654 TROQ12816 1431 aaPredicted RBP14.52□□□□□ -0.08
CTDSPL-205ENST00000436654 YEATS2Q9ULM3 1422 aa14.52□□□□□ -0.08
CTDSPL-205ENST00000436654 CLIP1P30622 1438 aa14.5□□□□□ -0.09
CTDSPL-205ENST00000436654 POGZQ7Z3K3 1410 aa14.5□□□□□ -0.09
CTDSPL-205ENST00000436654 RICTORQ6R327 1708 aa14.49□□□□□ -0.09
CTDSPL-205ENST00000436654 ADAMTSL3P82987 1691 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms